From dfa1002fd1d763930cf4502359fc19f4066c494e Mon Sep 17 00:00:00 2001 From: "cmzmasek@gmail.com" Date: Mon, 21 Oct 2013 22:10:54 +0000 Subject: [PATCH] inprogress --- forester/ruby/scripts/g.rb | 2 +- forester/ruby/scripts/gl.rb | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/forester/ruby/scripts/g.rb b/forester/ruby/scripts/g.rb index a4ccd52..c8e367b 100644 --- a/forester/ruby/scripts/g.rb +++ b/forester/ruby/scripts/g.rb @@ -1,4 +1,4 @@ -File.open( "g" ) do | file | +File.open( "g.txt" ) do | file | while line = file.gets if line =~ /^([A-Z0-9]{3,5})/ puts "/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/" + $1 + ".hmmscan " + $1 diff --git a/forester/ruby/scripts/gl.rb b/forester/ruby/scripts/gl.rb index ebb99a9..e4cf9e8 100644 --- a/forester/ruby/scripts/gl.rb +++ b/forester/ruby/scripts/gl.rb @@ -1,4 +1,4 @@ -File.open( "gl.txt" ) do | file | +File.open( "g.txt" ) do | file | while line = file.gets if line =~ /^([A-Z0-9]{3,5})/ puts $1 + "\t" + "/home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/" + $1 + ".fasta" -- 1.7.10.2