From e142bcca7d3c8a10695b87f94bc724cc2f5ab165 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 10 Dec 2004 14:33:53 +0000
Subject: [PATCH] COnservationSelected and rubberband method setup

---
 src/jalview/gui/AlignViewport.java |   24 +++++++++++++++++++++++-
 1 file changed, 23 insertions(+), 1 deletion(-)

diff --git a/src/jalview/gui/AlignViewport.java b/src/jalview/gui/AlignViewport.java
index 905255a..b21f47e 100755
--- a/src/jalview/gui/AlignViewport.java
+++ b/src/jalview/gui/AlignViewport.java
@@ -25,11 +25,14 @@ public class AlignViewport
   boolean groupDefiningMode = true;
 
   ColourSchemeI globalColourScheme = null;
+  boolean conservationColourSelected = false;
+
+  SequenceGroup rubberbandGroup = null;
 
   RendererI renderer = new SequenceRenderer(this);
 
   int             charHeight;
-  int          charWidth;
+  int             charWidth;
   int             chunkWidth;
   int             chunkHeight;
 
@@ -114,6 +117,25 @@ public class AlignViewport
     return consensus;
   }
 
+  public SequenceGroup getRubberbandGroup()
+  {
+    return rubberbandGroup;
+  }
+
+  public void setRubberbandGroup(SequenceGroup sg)
+  {
+    rubberbandGroup = sg;
+  }
+
+ public boolean getConservationSelected()
+ {
+   return conservationColourSelected;
+ }
+
+ public void setConservationSelected(boolean b)
+ {
+   conservationColourSelected = b;
+ }
 
   public int getStartRes() {
     return startRes;
-- 
1.7.10.2