From e3c14183195851bf542120fb00c04f529ed2a44c Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 26 Jul 2006 16:03:51 +0000
Subject: [PATCH] Add file ref for pdb files

---
 src/jalview/schemabinding/version2/Pdbentry.java   |   26 ++++++++++++++
 .../schemabinding/version2/PdbentryDescriptor.java |   36 ++++++++++++++++++++
 2 files changed, 62 insertions(+)

diff --git a/src/jalview/schemabinding/version2/Pdbentry.java b/src/jalview/schemabinding/version2/Pdbentry.java
index 15694db..93c2748 100755
--- a/src/jalview/schemabinding/version2/Pdbentry.java
+++ b/src/jalview/schemabinding/version2/Pdbentry.java
@@ -46,6 +46,11 @@ public class Pdbentry implements java.io.Serializable {
     private java.lang.String _type;
 
     /**
+     * Field _file
+     */
+    private java.lang.String _file;
+
+    /**
      * Field _items
      */
     private java.util.Vector _items;
@@ -105,6 +110,17 @@ public class Pdbentry implements java.io.Serializable {
     } //-- java.util.Enumeration enumeratePdbentryItem() 
 
     /**
+     * Returns the value of field 'file'.
+     * 
+     * @return String
+     * @return the value of field 'file'.
+     */
+    public java.lang.String getFile()
+    {
+        return this._file;
+    } //-- java.lang.String getFile() 
+
+    /**
      * Returns the value of field 'id'.
      * 
      * @return String
@@ -245,6 +261,16 @@ public class Pdbentry implements java.io.Serializable {
     } //-- jalview.schemabinding.version2.PdbentryItem removePdbentryItem(int) 
 
     /**
+     * Sets the value of field 'file'.
+     * 
+     * @param file the value of field 'file'.
+     */
+    public void setFile(java.lang.String file)
+    {
+        this._file = file;
+    } //-- void setFile(java.lang.String) 
+
+    /**
      * Sets the value of field 'id'.
      * 
      * @param id the value of field 'id'.
diff --git a/src/jalview/schemabinding/version2/PdbentryDescriptor.java b/src/jalview/schemabinding/version2/PdbentryDescriptor.java
index bb64034..61a9eda 100755
--- a/src/jalview/schemabinding/version2/PdbentryDescriptor.java
+++ b/src/jalview/schemabinding/version2/PdbentryDescriptor.java
@@ -135,6 +135,42 @@ public class PdbentryDescriptor extends org.exolab.castor.xml.util.XMLClassDescr
             fieldValidator.setValidator(typeValidator);
         }
         desc.setValidator(fieldValidator);
+        //-- _file
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_file", "file", org.exolab.castor.xml.NodeType.Attribute);
+        desc.setImmutable(true);
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Pdbentry target = (Pdbentry) object;
+                return target.getFile();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Pdbentry target = (Pdbentry) object;
+                    target.setFile( (java.lang.String) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return null;
+            }
+        } );
+        desc.setHandler(handler);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _file
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+            StringValidator typeValidator = new StringValidator();
+            typeValidator.setWhiteSpace("preserve");
+            fieldValidator.setValidator(typeValidator);
+        }
+        desc.setValidator(fieldValidator);
         //-- initialize element descriptors
         
         //-- _items
-- 
1.7.10.2