From eb64fc14cebadcfbb286bd4865d9df66e428a5d8 Mon Sep 17 00:00:00 2001 From: James Procter Date: Thu, 22 Jun 2023 17:38:07 +0200 Subject: [PATCH] =?utf8?q?JAL-4213=20-=20document=20the=20addReferenceAnnota?= =?utf8?q?tions=20method=E2=80=99s=20behaviour=20when=20given=20a=20selectio?= =?utf8?q?n?= MIME-Version: 1.0 Content-Type: text/plain; charset=utf8 Content-Transfer-Encoding: 8bit --- src/jalview/analysis/AlignmentUtils.java | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/jalview/analysis/AlignmentUtils.java b/src/jalview/analysis/AlignmentUtils.java index 1158c53..6ab49b2 100644 --- a/src/jalview/analysis/AlignmentUtils.java +++ b/src/jalview/analysis/AlignmentUtils.java @@ -1512,7 +1512,7 @@ public class AlignmentUtils * @param alignment * the alignment to add them to * @param selectionGroup - * current selection group (or null if none) + * current selection group - may be null, if provided then any added annotation will be trimmed to just those columns in the selection group */ public static void addReferenceAnnotations( Map> annotations, @@ -1536,7 +1536,7 @@ public class AlignmentUtils * @param seq * @param ann * @param selectionGroup - * - may be null + * current selection group - may be null, if provided then any added annotation will be trimmed to just those columns in the selection group * @return annotation added to {@code seq and {@code alignment} */ public static AlignmentAnnotation addReferenceAnnotationTo( -- 1.7.10.2