From f1fa440f885429399436bb09ef6d0639c8acd991 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Thu, 17 Feb 2022 17:15:38 +0000 Subject: [PATCH] JAL-3551 patch superpose test for additional undo dis/enable commands --- test/jalview/ext/pymol/PymolCommandsTest.java | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/test/jalview/ext/pymol/PymolCommandsTest.java b/test/jalview/ext/pymol/PymolCommandsTest.java index 7759724..d5dbc86 100644 --- a/test/jalview/ext/pymol/PymolCommandsTest.java +++ b/test/jalview/ext/pymol/PymolCommandsTest.java @@ -124,17 +124,17 @@ public class PymolCommandsTest toAlign.addRange("2", 22, 22, "C"); List commands = testee.superposeStructures(ref, toAlign, AtomSpecType.ALPHA); - assertEquals(commands.size(), 2); + assertEquals(commands.size(), 4); String refSpecCA = "(1//A/12-14/CA 1//B/18+22-23/CA"; String toAlignSpecCA = "(2//B/15-17+20-21/CA 2//C/22/CA"; String refSpec = "1//A/12-14/ 1//B/18+22-23/"; String toAlignSpec = "2//B/15-17+20-21/ 2//C/22/"; String altLoc = " and (altloc '' or altloc 'a'))"; // super command: separate arguments for regions to align - assertEquals(commands.get(0), + assertEquals(commands.get(1), new StructureCommand("pair_fit", toAlignSpecCA+altLoc, refSpecCA+altLoc)); // show aligned regions: one argument for combined atom specs - assertEquals(commands.get(1), new StructureCommand("show", "cartoon", + assertEquals(commands.get(3), new StructureCommand("show", "cartoon", refSpec + " " + toAlignSpec)); } -- 1.7.10.2