From f23bd6106e29475cc9fea5ca47716fa3725a3f53 Mon Sep 17 00:00:00 2001 From: "cmzmasek@gmail.com" Date: Sat, 14 Jul 2012 00:47:26 +0000 Subject: [PATCH] in progress --- forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb b/forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb index 11f29b3..0e6d1e7 100644 --- a/forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb +++ b/forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb @@ -300,7 +300,7 @@ module Evoruby from = s[ 0 ] to = s[ 1 ] puts from + "-" + to - new_msa_domains.add_sequence( Sequence.new( orig_name + "/" + from + "-" + to + " [" + basename + "] [" + current_species + "]", seq.get_sequence_as_string[from..to] ) ) + new_msa_domains.add_sequence( Sequence.new( orig_name + "/" + from + "-" + to + " [" + basename + "] [" + current_species + "]", seq.get_sequence_as_string[from.to_i..to.to_i] ) ) end } end -- 1.7.10.2