From f60095e1803c3f716b8244057a4faefe5e767936 Mon Sep 17 00:00:00 2001
From: Jim Procter <j.procter@dundee.ac.uk>
Date: Wed, 30 Jun 2021 13:32:24 +0100
Subject: [PATCH] JAL-3847 set default behaviour as exclude when dealing with
 duplicate entries in jars and zips

---
 build.gradle |    7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/build.gradle b/build.gradle
index fc37a00..172f9bc 100644
--- a/build.gradle
+++ b/build.gradle
@@ -51,6 +51,7 @@ repositories {
 }
 
 
+
 // in ext the values are cast to Object. Ensure string values are cast as String (and not GStringImpl) for later use
 def string(Object o) {
   return o == null ? "" : o.toString()
@@ -1335,6 +1336,9 @@ jar {
     "Codebase": application_codebase
   }
 
+  duplicatesStrategy "EXCLUDE"
+
+
   destinationDir = file("${jalviewDir}/${package_dir}")
   archiveName = rootProject.name+".jar"
 
@@ -1396,6 +1400,9 @@ shadowJar {
   manifest {
     attributes 'Implementation-Version': JALVIEW_VERSION
   }
+
+  duplicatesStrategy "EXCLUDE"
+
   mainClassName = shadow_jar_main_class
   mergeServiceFiles()
   classifier = "all-"+JALVIEW_VERSION+"-j"+JAVA_VERSION
-- 
1.7.10.2