From ff75356cd448ad8bf24733c328054a53e87c242c Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Tue, 14 Dec 2004 11:17:27 +0000
Subject: [PATCH] Hashtable size must allow for total-start

---
 src/jalview/analysis/Conservation.java |    2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/jalview/analysis/Conservation.java b/src/jalview/analysis/Conservation.java
index 4a93eef..520036e 100755
--- a/src/jalview/analysis/Conservation.java
+++ b/src/jalview/analysis/Conservation.java
@@ -145,7 +145,7 @@ public class Conservation {
 
       if (percentageGaps > pgaps)
       {
-        Hashtable resultHash = (Hashtable)total.elementAt(i);
+        Hashtable resultHash = (Hashtable)total.elementAt(i-start);
 
         //Now find the verdict
         int         count = 0;
-- 
1.7.10.2