From fffaf44a45ab09c53de09edf7b670f44e84c1117 Mon Sep 17 00:00:00 2001 From: "cmzmasek@gmail.com" Date: Thu, 20 Dec 2012 01:15:40 +0000 Subject: [PATCH] Edited wiki page RIO through web user interface. --- wiki/RIO.wiki | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/wiki/RIO.wiki b/wiki/RIO.wiki index 79c40b7..a10b4eb 100644 --- a/wiki/RIO.wiki +++ b/wiki/RIO.wiki @@ -13,8 +13,8 @@ java -Xmx2048m -cp forester.jar org.forester.application.rio [options] : first gene tree to analyze (0-based index) - * -l= : last gene tree to analyze (0-based index) + * `-f=` : first gene tree to analyze (0-based index) + * `-l=` : last gene tree to analyze (0-based index) * -r= : re-rooting method for gene trees, possible values or 'none', 'midpoint', or 'outgroup' (default: by minizming duplications) * -o= : for rooting by outgroup, name of outgroup (external gene tree node) * -b : to use SDIR instead of GSDIR (faster, but non-binary species trees are disallowed) -- 1.7.10.2