From 29b08ed1511c3d09d6dff7699569096af72c5af0 Mon Sep 17 00:00:00 2001 From: pvtroshin Date: Fri, 9 Dec 2011 15:07:50 +0000 Subject: [PATCH] web site minor tweaks git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@4808 e3abac25-378b-4346-85de-24260fe3988d --- website/index.html | 9 +++++---- website/man_about.html | 2 +- 2 files changed, 6 insertions(+), 5 deletions(-) diff --git a/website/index.html b/website/index.html index 35cac05..7f25255 100644 --- a/website/index.html +++ b/website/index.html @@ -48,8 +48,9 @@ page

JABAWS is free software which provides web services for prediction of protein disorder, multiple sequence alignment and amino acid conservation conveniently packaged to run on your local computer, server or cluster. JABAWS v2.0 introduces protein disorder prediction services based on DisEMBL, IUPred, Ronn, GlobPlot and protein sequence alignment conservation measures calculated by AACon. A new multiple sequence alignment service for Clustal Omega is also provided, in addition to standard JABAWS:MSA services for Clustal W, MAFFT, MUSCLE, TCOFFEE and PROBCONS. -JABA Web Services can be accessed from the Jalview desktop application and provide multiple alignment and sequence analysis calculations limited only by your own local computing resources.

-

Please note that JABAWS 2 is supported by Jalview 2.6.1 onwards, but the disorder prediction, Clustal Omega and AACon services will only be accessible in Jalview 2.8 (due for release in January 2012.)  In the meantime you can access all JABAWS2 services through the JABAWS command-line client.

+JABA Web Services can be accessed from the Jalview desktop application and provide multiple alignment and sequence analysis calculations limited only by your own local computing resources.
+
+Please note that JABAWS 2 is supported by Jalview 2.6.1 onwards, but the disorder prediction, Clustal Omega and AACon services will only be accessible in Jalview 2.8 (due for release in January 2012). In the meantime you can access all JABAWS2 services through the JABAWS command-line client.

@@ -83,7 +84,7 @@ page
The Client: Command Line Client binary | source +"http://www.compbio.dundee.ac.uk/download/get?id=jaba-client-src-2.0.jar">source @@ -112,7 +113,7 @@ title="http://www.compbio.dundee.ac.uk/jabaws/ClustalWS?" rel= - diff --git a/website/man_about.html b/website/man_about.html index e37fd95..057b0c9 100644 --- a/website/man_about.html +++ b/website/man_about.html @@ -125,7 +125,7 @@ software. Jalview, which is a multiple seq functionality as the command line client, but instead allows JABAWS services to be accessed in a more user-friendly manner, through a graphical user interface.

JABAWS versions compatibility and Jalview support

JABAWS version 2 is fully backward compatible with JABAWS version 1. That means that all JABAWS 1 clients should be able to use JABAWS 2 instead. However, they will be limited to the multiple sequence alignment web services only. To benefit of new web services introduced in JABAWS 2 the clients have to be updated.
-Jalview since version 2.6.1 integrates fully with JABAWS 1. Therefore it will be possible to use any versions of Jalview after 2.6.1 with JABAWS 1. However, the full support for JABAWS 2 is introduced in Jalview version 2.8 or later. 

+Jalview since version 2.6.1 integrates fully with JABAWS 1. Therefore it will be possible to use any versions of Jalview after 2.6.1 with JABAWS 1. However, the full support for JABAWS 2 is introduced in Jalview version 2.8 or later.

Programmatic access to JABAWS

JABA Web Services are WS-I basic profile compliant, which means they can be accessed using any programming language or system that can utilize standard SOAP web services. -- 1.7.10.2