From a397e016283fde696471bf718f7a8ba958ad1dc2 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Fri, 24 May 2024 16:36:37 +0100 Subject: [PATCH] JAL-4159 fix PairwiseAlignmentPanelTest - reinstate correct recording of the endRes for each sequence aligned --- src/jalview/analysis/AlignSeq.java | 2 ++ 1 file changed, 2 insertions(+) diff --git a/src/jalview/analysis/AlignSeq.java b/src/jalview/analysis/AlignSeq.java index 757c8d1..e806d2b 100755 --- a/src/jalview/analysis/AlignSeq.java +++ b/src/jalview/analysis/AlignSeq.java @@ -468,6 +468,8 @@ public class AlignSeq int trace; maxscore = score[i][j] / 10f; + seq1end = maxi + 1; + seq2end = maxj + 1; aseq1 = new int[seq1.length + seq2.length]; aseq2 = new int[seq1.length + seq2.length]; -- 1.7.10.2