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JAL-629 removed debug prints. added .cif. added some comments/code-markers
2022-11-03
Ben Soares
JAL-3416 Start to add JInternalFrame icons (to replace...
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2022-11-02
Ben Soares
JAL-1988 JAL-3772 Moving packages to somewhere more...
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2022-11-01
Ben Soares
JAL-3416 set flatlaf default drag mode to LIVE_DRAG_MODE
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2022-11-01
Ben Soares
JAL-1988 JAL-3772 Change default alignmentviewport...
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2022-11-01
Ben Soares
JAL-4064 tidying build.gradle
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2022-11-01
Ben Soares
JAL-4064 re-added bundled macOS JREs as Filesets, which...
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2022-11-01
Ben Soares
JAL-4064 Cleaned up file sets in install4j template...
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2022-11-01
Ben Soares
JAL-4064 Download JRE/JDKs from Azul if not os/arch...
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2022-10-29
Ben Soares
JAL-1988 JAL-3772 removed a debugging log line
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2022-10-28
Ben Soares
JAL-1988 JAL-3772 Removed 'Wait' button from waitDialog...
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2022-10-28
Ben Soares
JAL-1988 JAL-3772 Fixed wait between waitDialog appearances...
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2022-10-27
Ben Soares
JAL-1988 Allow generic Container object in JvOptionPane...
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2022-10-27
Ben Soares
Merge branch 'develop' into bug/JAL-1988_JAL-3772_improved_q...
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2022-10-27
Ben Soares
JAL-4083 don't need globalUseScriptWait after all,...
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2022-10-27
Ben Soares
JAL-4083 only set globalUseScriptWait if needed
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2022-10-27
Ben Soares
JAL-4083 Use jmolViewer.scriptWait instead of jmolViewer...
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2022-10-26
Ben Soares
Merge branch 'features/r2_11_2_alphafold/JAL-2349_JAL...
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2022-10-26
Ben Soares
JAL-3416 (and others) increasing number of STDERR lines...
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2022-10-25
Ben Soares
JAL-3416 Making FlatLaF default for macs due to a problem...
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2022-10-24
Ben Soares
JAL-1988 JAL-3772 wait timer working first time but...
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2022-10-24
Ben Soares
JAL-1988 JAL-3772 Non-blocking modal dialogs for unsaved...
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2022-10-11
Ben Soares
JAL-4014 Changed gecos display names to match labels...
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2022-09-29
Ben Soares
Merge branch 'develop' into bug/JAL-1988_JAL-3772_improved_q...
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2022-09-26
Ben Soares
JAL-1988 JAL-3772 linked undostack to saved changes...
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2022-09-26
Ben Soares
JAL-1988 better wording for quit dialog
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2022-09-23
Ben Soares
JAL-1988 JAL-3772 Quit confirmation dialog boxes with...
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2022-09-23
Ben Soares
JAL-3676 extra information about jalview_properties...
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2022-09-23
Ben Soares
JAL-1988 property based fake delay whilst saving project...
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2022-08-23
Ben Soares
JAL-4014 JAL-4063 Added gecos colourScheme names (INFO...
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2022-07-26
Ben Soares
JAL-4036 Fixed the virus_host_id query field
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2022-07-26
Ben Soares
JAL-4036 Added text to help about different number...
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2022-07-25
Ben Soares
JAL-4036 updated help about new UniProt API
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2022-07-25
Ben Soares
JAL-4036 moved a comment block
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2022-07-25
Ben Soares
JAL-4034 button looks better also on other OSes with...
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2022-07-22
Ben Soares
JAL-4036 Changes made from code review CR-JAL-265
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2022-07-22
Ben Soares
JAL-4036 Add getDbName to the GFTSPanelI and add an...
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2022-07-22
Ben Soares
JAL-4036 removing the query field code from the dropdown...
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2022-07-21
Ben Soares
JAL-4036 Don't autosearch changing index when autosearch...
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2022-07-21
Ben Soares
JAL-4036 add search fieldname to dropdown list
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2022-07-21
Ben Soares
JAL-4036 removed often duplicated pluralisation in...
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2022-07-21
Ben Soares
JAL-4036 New configuration, target and pagination process...
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2022-07-15
Ben Soares
JAL-4034 Use the new non-modal JDialog for 3DBeacons...
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2022-07-15
Ben Soares
JAL-4034 Allow request for non-modal JDialog, which...
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2022-07-12
Ben Soares
JAL-4034 change to jalview property name
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2022-07-12
Ben Soares
JAL-4034 showConfirmDialog works for both desktop and...
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2022-07-11
Ben Soares
JAL-4034 Non-blocking 3D Beacons query after warning...
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2022-07-11
Ben Soares
JAL-4034 allow a jalview_property to set the threshold...
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2022-06-28
Ben Soares
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS_APQH...
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2022-06-28
Ben Soares
JAL-1988 Don't put Quit in the File menu if there's...
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2022-06-23
Ben Soares
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS_APQH...
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2022-06-23
Ben Soares
JAL-1988 Check for setHandler capability to avoid About...
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2022-06-13
Ben Soares
JAL-1988 Hack to ensure Quit dialog box is moved to...
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2022-06-13
Ben Soares
JAL-4004 Fix missing whatsNew.html when not building...
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2022-06-07
Ben Soares
JAL-4020 class formatting
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2022-06-06
Ben Soares
JAL-4020 updated tests
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2022-06-06
Ben Soares
JAL-4020 class reformatting
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2022-05-12
Ben Soares
JAL-4014 4 gecos colour schemes added
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2022-04-27
Ben Soares
JAL-1544 version number typo, probably copy and paste
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2022-04-27
Ben Soares
JAL-3989 Populate template files for hugo build: archive...
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2022-04-25
Ben Soares
JAL-3989 moved getdown build dirs to build/website...
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2022-04-25
Ben Soares
JAL-3989 Independent creation of JSON installer sections
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2022-04-21
Ben Soares
Merge branch 'develop' into merge/JAL-3978+JAL-3553...
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2022-04-21
Ben Soares
Merge branch 'develop' into task/JAL-3991_check_actual_JAVA_...
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2022-04-06
Ben Soares
JAL-3991 Made info displayed only when needed (Java...
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2022-04-06
Ben Soares
JAL-3991 Added information output about the slightly...
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2022-04-06
Ben Soares
JAL-3991 JAVA_COMPILE_VERSION put into build_properties...
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2022-04-05
Ben Soares
JAL-3989 slight refactor of build.gradle, add more...
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2022-04-04
Ben Soares
JAL-3989 fix a build date once in build.gradle, not...
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2022-03-31
Ben Soares
Merge branch 'task/JAL-3553_improved_install4j_output_txt...
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2022-03-31
Ben Soares
Merge branch 'develop' into improvement/JAL-3978_add_gradle_...
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2022-03-30
Ben Soares
JAL-360 JAL-3975 make AlignFrame the parent of FeatureEditor...
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2022-03-21
Ben Soares
JAL-3416 Updated FlatLaF to 2.1
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2022-03-18
Ben Soares
JAL-3978 Using getdowninstanceappdir and getdowninstanceappb...
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2022-03-18
Ben Soares
JAL-3978 Getdown add getdownappbase property to launched...
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2022-03-18
Ben Soares
JAL-3978 New tasks to build archive 'old' dir with...
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2022-03-16
Ben Soares
JAL-3978 task stub and getdown splash screens
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2022-03-13
Ben Soares
Append git.hash and git.branch to RELEASE file stored...
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2022-03-11
Ben Soares
JAL-3973 This fixes the gradle build when not in a...
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2022-03-08
Ben Soares
JAL-3103 updated help doc to remove default browser...
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2022-03-08
Ben Soares
JAL-3103 Removed code and unused widgets for defaultBrowser
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2022-03-08
Ben Soares
JAL-3103 Remove BrowserLauncher2 and use Desktop.browse...
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2022-03-08
Ben Soares
JAL-3103 add BrowserLauncher2 LGPLv2.1 to THIRDPARTYLIBS
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2022-03-08
Ben Soares
JAL-3103 Put jalview.jar first in getdown for .properties...
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2022-03-07
Ben Soares
JAL-3103 Switched to (a wrapper around) BrowserLauncher2
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2022-03-04
Ben Soares
JAL-3830 added command line to whatsnew and releases
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2022-03-04
Ben Soares
JAL-3830 Added new command line usage to docs
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2022-03-04
Ben Soares
JAL-3608 added to LaF documentation
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2022-03-03
Ben Soares
JAL-3830 fix broken/buggy install4j9 setting of executeSetup...
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2022-03-02
Ben Soares
JAL-3691 bumped the version to 1.8.3-1.2.12 in source...
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2022-03-02
Ben Soares
JAL-3962 Added jre/bin and dist folders to the native...
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2022-03-02
Ben Soares
JAL-3130 updated download_jres.sh
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2022-02-12
Ben Soares
JAL-3949 fix testProps path and make line count more...
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2022-02-11
Ben Soares
Merge branch 'update/JAL-3949_jalview_bin_Console_to_cure_sa...
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2022-02-11
Ben Soares
JLogger loglevel check on whether to call the actual...
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2022-02-11
Ben Soares
JAL-3949 fixed failing commandlinetests due to more...
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2022-02-11
Ben Soares
JAL-3949 added Java Console autoscrolling help paragraph
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2022-02-11
Ben Soares
JAL-3949 read ~/.jalview_properties before initialising...
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2022-02-11
Ben Soares
Merge branch 'develop' into update/JAL-3949_abstracted_loggi...
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2022-02-11
Ben Soares
JAL-3949 Complete new abstracted logging framework...
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2022-02-04
Ben Soares
JAL-3949 An attempt at converting to Log4j 2 -- no...
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