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JAL-629 remove jvmArgs for memory for tests. Increase clover memory
2022-06-07
Ben Soares
JAL-4020 added the \Scripts\pymol.exe. to the pathList
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2022-06-06
Ben Soares
JAL-4020 Added the +2 arg for PyMOLWin.exe allowing...
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2022-06-06
Ben Soares
JAL-4020 updated tests
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2022-06-06
Ben Soares
JAL-4020 class reformatting
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2022-06-06
Ben Soares
JAL-4020 Added path search for global installation...
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2022-06-06
Ben Soares
JAL-4020 Added search for PyMOLWinWithConsole.bat ...
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2022-05-12
Ben Soares
Merge branch 'develop' into issues/JAL-3553+JAL-3978...
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2022-05-12
Ben Soares
JAL-4014 4 gecos colour schemes added to help documentation
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2022-05-12
Ben Soares
JAL-4014 4 gecos colour schemes added
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2022-05-10
Ben Soares
JAL-4004 cosmetic improvements for Java documentation...
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2022-05-09
Ben Soares
JAL-4004 gradle task releasesTemplates now part of...
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2022-05-09
Ben Soares
JAL-4004 working templates and generated whatsNew.html...
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2022-05-09
Ben Soares
JAL-4004 remove stray empty h3 headers
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2022-05-09
Ben Soares
JAL-4004 gradle releasesTemplates builds releases.html
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2022-05-09
Ben Soares
JAL-4004 Temporary mechanism to add JalviewJS link...
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2022-05-09
Ben Soares
JAL-3989 Code tidying, added JVL_HEADER for older versions...
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2022-05-05
Ben Soares
JAL-4004 Now generating hugo files from help/markdown/...
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2022-05-04
Ben Soares
JAL-4004 existing releases-VERSION.md files and releases...
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2022-05-04
Ben Soares
JAL-4004 locations for markdown to go into whatsnew...
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2022-05-03
Ben Soares
JAL-3989 improved parsing and formatting now using...
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2022-05-03
Ben Soares
JAL-1544 minor errors in releases.html and one missing...
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2022-04-29
Ben Soares
JAL-3989 small improvements to output markdown
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2022-04-28
Ben Soares
JAL-3989 add in issue shortcodes to the archive version...
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2022-04-27
Ben Soares
JAL-1544 version number typo, probably copy and paste
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2022-04-27
Ben Soares
JAL-3989 Populate template files for hugo build: archive...
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2022-04-25
Ben Soares
JAL-3989 moved getdown build dirs to build/website...
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2022-04-25
Ben Soares
JAL-3989 Independent creation of JSON installer sections
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2022-04-25
Ben Soares
JAL-3978 clean up unnecessary local variables for JALVIEW_VE...
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2022-04-22
Ben Soares
JAL-3989 Changed to using com.google.common.hash for...
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2022-04-21
Ben Soares
Merge branch 'develop' into merge/JAL-3978+JAL-3553...
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2022-04-21
Ben Soares
Merge branch 'develop' into task/JAL-3991_check_actual_JAVA_...
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2022-04-06
Ben Soares
JAL-3991 Made info displayed only when needed (Java...
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2022-04-06
Ben Soares
JAL-3991 Added information output about the slightly...
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2022-04-06
Ben Soares
JAL-3991 JAVA_COMPILE_VERSION put into build_properties...
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2022-04-05
Ben Soares
JAL-3989 slight refactor of build.gradle, add more...
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2022-04-04
Ben Soares
JAL-3989 fix a build date once in build.gradle, not...
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2022-03-31
Ben Soares
Merge branch 'task/JAL-3553_improved_install4j_output_txt...
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2022-03-31
Ben Soares
Merge branch 'develop' into improvement/JAL-3978_add_gradle_...
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2022-03-21
Ben Soares
JAL-3416 Updated FlatLaF to 2.1
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2022-03-18
Ben Soares
JAL-3978 Using getdowninstanceappdir and getdowninstanceappb...
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2022-03-18
Ben Soares
JAL-3978 Getdown add getdownappbase property to launched...
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2022-03-18
Ben Soares
JAL-3978 New tasks to build archive 'old' dir with...
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2022-03-16
Ben Soares
JAL-3978 task stub and getdown splash screens
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2022-03-13
Ben Soares
Append git.hash and git.branch to RELEASE file stored...
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2022-03-11
Ben Soares
JAL-3973 This fixes the gradle build when not in a...
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2022-03-08
Ben Soares
JAL-3103 updated help doc to remove default browser...
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2022-03-08
Ben Soares
JAL-3103 Removed code and unused widgets for defaultBrowser
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2022-03-08
Ben Soares
JAL-3103 Remove BrowserLauncher2 and use Desktop.browse...
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2022-03-08
Ben Soares
JAL-3103 add BrowserLauncher2 LGPLv2.1 to THIRDPARTYLIBS
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2022-03-08
Ben Soares
JAL-3103 Put jalview.jar first in getdown for .properties...
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2022-03-07
Ben Soares
JAL-3103 Switched to (a wrapper around) BrowserLauncher2
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2022-03-04
Ben Soares
JAL-3830 added command line to whatsnew and releases
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2022-03-04
Ben Soares
JAL-3830 Added new command line usage to docs
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2022-03-04
Ben Soares
JAL-3608 added to LaF documentation
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2022-03-03
Ben Soares
JAL-3830 fix broken/buggy install4j9 setting of executeSetup...
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2022-03-02
Ben Soares
JAL-3691 bumped the version to 1.8.3-1.2.12 in source...
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2022-03-02
Ben Soares
JAL-3962 Added jre/bin and dist folders to the native...
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2022-03-02
Ben Soares
JAL-3130 updated download_jres.sh
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2022-02-12
Ben Soares
JAL-3949 fix testProps path and make line count more...
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2022-02-11
Ben Soares
Merge branch 'update/JAL-3949_jalview_bin_Console_to_cure_sa...
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2022-02-11
Ben Soares
JLogger loglevel check on whether to call the actual...
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2022-02-11
Ben Soares
JAL-3949 fixed failing commandlinetests due to more...
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2022-02-11
Ben Soares
JAL-3949 added Java Console autoscrolling help paragraph
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2022-02-11
Ben Soares
JAL-3949 read ~/.jalview_properties before initialising...
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2022-02-11
Ben Soares
Merge branch 'develop' into update/JAL-3949_abstracted_loggi...
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2022-02-11
Ben Soares
JAL-3949 Complete new abstracted logging framework...
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2022-02-04
Ben Soares
JAL-3949 An attempt at converting to Log4j 2 -- no...
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2022-02-03
Ben Soares
JAL-3949 upgraded log4j to 2.17.1 (no actual known...
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2022-01-29
Ben Soares
JAL-3830 JAL-3420 added new jvl_file to install4j9...
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2022-01-29
Ben Soares
Merge branch 'develop' into improvement/JAL-3830_install4j9_...
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2022-01-28
Ben Soares
Merge branch 'develop' into improvement/JAL-3420_match_jvl_i...
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2022-01-28
Ben Soares
new jvl_file svg, png, ico and icns files, and changed...
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2022-01-28
Ben Soares
Merge branch 'develop' into JAL-3416_different_look_and_feel...
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2022-01-27
Ben Soares
update to flatlaf 2.0.1
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2022-01-12
Ben Soares
JAL-3703 Test that fails in Windows only, and only...
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2022-01-11
Ben Soares
JAL-3703 fix Gff3 shared InputStream with embedded...
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2022-01-11
Ben Soares
close filehandles straight after parse, without setting...
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2022-01-11
Ben Soares
JAL-3937 update releases.html
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2022-01-10
Ben Soares
JAL-3937 enable AIA download of intermediate certificates...
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2022-01-10
Ben Soares
JAL-3937 enable AIA download of intermediate certificates...
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2021-12-22
Ben Soares
Merge branch 'develop' into critical/JAL-3933_log4j_update_f...
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2021-12-22
Ben Soares
JAL-3934 updated log4j from 2.16.0 to 2.17.0
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2021-12-22
Ben Soares
JAL-3934 updated log4j from 2.16.0 to 2.17.0
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2021-12-15
Ben Soares
JAL-3933 updated THIRDPARTYLIBS
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2021-12-15
Ben Soares
JAL-3933 updated THIRDPARTYLIBS
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2021-12-15
Ben Soares
JAL-3933 updated THIRDPARTYLIBS
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2021-12-15
Ben Soares
JAL-3933 updated THIRDPARTYLIBS
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2021-12-14
Ben Soares
JAL-3933 updated log4j and slf4j jars with log4j1.2...
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2021-12-14
Ben Soares
JAL-3933 updated slf4j to 1.7.32
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2021-12-14
Ben Soares
JAL-3933 Updated log4j jars with log4j-2.16.0 and compatibil...
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2021-12-07
Ben Soares
JAL-3930 Added a customizedId="JALVIEW" to launcher...
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2021-12-07
Ben Soares
JAL-3930 Added a customizedId="JALVIEW" to launcher...
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2021-11-29
Ben Soares
JAL-3594 correct Jalview Develop logo SVG added in...
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2021-11-25
Ben Soares
JAL-3553 added filesize to json
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2021-11-19
Ben Soares
JAL-3553 now creating a json file for use on website...
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2021-11-16
Ben Soares
JAL-3553 copy sha256sums to a versioned filename too...
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2021-11-16
Ben Soares
JAL-3553 added customized labels for install4j output.txt
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2021-11-16
Ben Soares
JAL-3553 improve the labels in install4j's output.txt...
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2021-11-05
Ben Soares
JAL-3746 Updated help docs for 3D-Beacons. Added and...
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2021-11-01
Ben Soares
JAL-3907 changed two commented out lines to reflect...
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