vamsas.git
2007-09-27 jproctermade finalize check before zeroing self-references...
2007-09-27 jprocterAdded test to ensure all bytes are transferred during...
2007-09-24 jproctertest for property type and property type constants
2007-09-18 jprocterfixed pathological vamsas archive issue related to...
2007-09-18 jprocterreally simple test for accessibility of a zip file...
2007-09-18 jprocterJava ZipFile code does not cope with entries with lots...
2007-09-18 jprocteradded retry mechanism for opening of vamsas archives...
2007-09-18 jprocternote on occasional null pointer exceptions raised on...
2007-09-18 jprocteradded two tests to ensure a vamsasArchive is readable...
2007-09-14 jprocteradded openSession from Stored Document ClientFactory...
2007-09-14 jproctertidied command line interface (a bit) and implement...
2007-09-14 jprocterimplement low level functions for initialising a new...
2007-09-14 jproctermoved methods for opening a stored session document...
2007-09-14 jprocterimplement new client factory methods to open a stored...
2007-09-14 jproctertodo on importDocument (whether to exclude from interfa...
2007-09-14 jprocteradded new client factory methods to open a stored sessi...
2007-09-14 jprocterset printRootInfo so root labels are not lost.
2007-09-11 jprocterun-necessary spaces for bootstrap separator in root...
2007-09-11 jprocterbootstrap value parsing/recovery only for nodes with...
2007-09-11 jprocterrefactored initialisation of new session with existing...
2007-09-11 jproctertodo for importing stored session as a new session
2007-09-11 jprocterensure that document updates only occur if the vamsas...
2007-09-04 jproctermade serializable
2007-08-31 jprocterformatting
2007-08-31 jprocterrefactoring to enable initialisation of session from...
2007-08-31 jprocterbugfix for new appdata writes not overwriting existing...
2007-08-31 jproctervamsas client build with new ClientFactory methods...
2007-08-31 jprocterflags for reading/writing client or user appdata only.
2007-08-31 jprocteradded newSession methods to create a new vamsas session...
2007-08-28 jprocterlast core object source generation on...
2007-08-28 jprocternotional testing of client and user app data read and...
2007-08-28 jproctermore rar friendly appdata reference name and uniqueness...
2007-08-22 jprocterhacked castor to be a bit faster (IdentitySet and log...
2007-08-22 jprocterRemoved clientfile watcher elements in attempt to remov...
2007-08-22 jprocterattempts to remove any locks after client is finalized
2007-08-22 jprocterfixed regex and made 'improper' support for parsing...
2007-08-22 jprocterbetter 'main' test and support creation of treenodes...
2007-08-21 jprocterbeginning of 'simple' interface for newick string based...
2007-08-21 jprocterrefactored and new methods for making and processing...
2007-08-21 jprocterrefactored from newickfile
2007-08-21 jprocternewickfile class moved into its own package ready for...
2007-08-21 jprocternew marshaller instance ensures we use marshalling...
2007-08-17 jprocterformatting changes
2007-08-17 jproctersafety checks and informational Errors generated when...
2007-08-17 jprocterTODO comments
2007-08-17 jprocternew method to test if a particular file is or is relate...
2007-08-17 jprocterportability issue error messages
2007-08-17 jprocterfixed update of existing appdata jar entry bug (raised...
2007-08-16 jprocterrefactored IClientAppdata and implementation has been...
2007-08-16 jprocterrefactored AppData stream classes so they are returned...
2007-07-30 jprocterupdated classpath for eclipse project
2007-07-30 jprocternull pointer exception on attempt to release lock expli...
2007-07-15 jproctervorbaId generator constructs valid ID strings (NCNames)
2007-06-29 jprocter0 to unbounded Dataset/Sequence/DbRef/Map elements...
2007-06-28 jprocterlogic for debug message (if either or both mapped eleme...
2007-06-28 jprocterdebug message for default mapping
2007-06-28 jprocteradded mapType utilities.
2007-06-28 jprocterimported utility classes for working with MapTypes...
2007-06-28 jprocterquieter logging
2007-06-28 jprocterbuild on 28th June
2007-06-28 jprocterupdated castor to castor-1.1-cycle
2007-06-28 jprocterprototype of Newick string parsing code and node bindin...
2007-06-28 jprocterraise the DOCUMENT_REQUESTTOCLOSE event and debug output.
2007-06-28 jprocteruse the simpleClient's lockFactory for the client's...
2007-06-28 jprocterdebugging on the haltWatch method
2007-06-28 jprocteruse of config class
2007-06-28 jprocterbeginnings of configuration settings class. Introduced...
2007-06-28 jproctermodified warning for unresolved IDRef during castor...
2007-06-28 jprocteradded check for 'broken update' - where vamsas document...
2007-06-28 jprocterend position not correctly set.
2007-06-28 jproctersequence mappings and DbRef mapping objects unified...
2007-06-28 jproctercyclic IDREF patched castor-1.1.1 source
2007-06-28 jprocterless verbose default logging
2007-06-12 jprocterfixed regex to remove all kinds of file separators...
2007-06-12 pmargueriteAdded to mechanism to determine if a client closing...
2007-05-22 jprocterschema changes: provenance-entry-date is now an xmlSche...
2007-05-21 jprocterlog validation errors which cause the 'mergeRoots'...
2007-05-21 pmargueriteVamsasSession: increased time before considering the...
2007-05-21 jproctertest cdoc object retrieve by VorbaId and add timeout...
2007-05-21 jproctertodo doc
2007-05-21 jprocterfix non-retrieval of vobject by vorba id on clientdoc...
2007-05-18 pmargueriteVamsasSession: fixed incorrectly stopping the EventGene...
2007-05-18 pmargueriteVamsasSession: insure the RemoveClientWatchCallBack...
2007-05-18 pmargueriteAdded support for crashed client.
2007-05-18 jprocterbetter command line processing options (load, save...
2007-05-18 jprocterjavadoc todo
2007-05-18 jprocterremoved old Mapping object dependency
2007-05-18 pmargueritebuild.xml: modified javadoc ant task to add ref to...
2007-05-18 amwaterhousesequenceMapping added
2007-04-24 jproctercastor-1.1 source generation
2007-04-24 jprocterDescriptors live in uk.ac.vamsas.objects.core.descripto...
2007-04-24 jprocterrelatively silent debug state (have to sort out of...
2007-04-24 jprocterpick manager and simulation of alignment modification...
2007-04-24 jprocterpart-implemented and *untested*
2007-04-24 jprocterintroduced hashCode based object change detection that...
2007-04-24 jprocterattempt to fix occasional backupSessionFile exception.
2007-04-24 jprocterambiguous import of 'Lock' removed.
2007-04-24 jprocterincorrect update approach (attempt prior to hashCode...
2007-04-24 jprocterint to long type change in castor-1.1(v) objects
2007-04-24 jprocterrebult for castor-1.1(vamsas version)
next