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jalview.git
2017-11-07 Jim ProcterJAL-2823 JAL-2822 JAL-2684 test sequence start and... commit | commitdiff | tree | snapshot
2017-11-07 Jim ProcterJAL-2822 JAL-2684 clarified javadoc commit | commitdiff | tree | snapshot
2017-11-07 Jim ProcterJAL-2684 failing test for trim-start -> incorrect pairw... commit | commitdiff | tree | snapshot
2017-11-06 Jim ProcterJAL-2684 tidy unneeded code commit | commitdiff | tree | snapshot
2017-11-06 Jim ProcterMerge branch 'bug/JAL-2541cutRelocateFeatures' into... commit | commitdiff | tree | snapshot
2017-11-06 Jim ProcterJAL-2756 release notes commit | commitdiff | tree | snapshot
2017-11-06 Jim ProcterMerge branch 'bug/JAL-2756sequenceidmessage' into develop commit | commitdiff | tree | snapshot
2017-11-03 Jim ProcterMerge branch 'documentation/JAL-2698_release2103' into... commit | commitdiff | tree | snapshot
2017-11-03 Jim ProcterJAL-2818 modified README for launching jalview from... commit | commitdiff | tree | snapshot
2017-10-31 kiramtJAL-2756 update for new EBI https link commit | commitdiff | tree | snapshot
2017-10-27 gmungocJAL-2526 updated javadoc commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterJAL-2698 update version and cut release branch commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterJAL-2546 release notes commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterJAL-2488 patch causes of NPE during testStoreAndRecover... commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterMerge branch 'feature/JAL-2488finalize' into develop commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterJAL-2036 2.10.3 release notes commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterJAL-2793 cancelling font changed dialog didn't call... commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterJAL-2548 release notes commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterMerge branch 'bug/JAL-2776toggleGroupColour' into develop commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterJAL-2684 JAL-2685 release notes commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterJAL-2685 tidy up html doc commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterMerge branch 'features/JAL-2685pairwiseSeqLimits' into... commit | commitdiff | tree | snapshot
2017-10-26 Jim ProcterJAL-2392 test asserts for progressbar creation on the... commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2617 release notes commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2617mappedStopCodon' into develop commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2636 release notes commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2667 release notes commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2667mouseWheelWrapped' into develop commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2727 release notes commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2727 add not to Test failed message recommending... commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2727closeAllFreeMemory' into... commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2732 JAL-1900 JAL-1625 release notes commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterMerge branch 'bugs/JAL-2779_osx_dialogsequencingbroke... commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2779 remove empty block and if statement commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2790 JAL-2392 release notes commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into... commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2790 provide a cancel button for JABAWS and AACon... commit | commitdiff | tree | snapshot
2017-10-25 Jim ProcterJAL-2392 auto boxing rather than explicit Long as key commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2495 release notes commit | commitdiff | tree | snapshot
2017-10-24 gmungocJAL-2495 highlight all mapped sequences from structure... commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2643 JAL-2524 release notes commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2524 release notes commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2733 JAL-2658 release notes commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-1980 release notes (retrodoc for 2.10.0) commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2687 JAL-2608 release notes commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterMerge branch 'features/JAL-2608closeOverview' into... commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2542 release notes commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2541 remove second unnecessary if commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2541 only need to shift features for ‘internal... commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2541 Cut ops always stash the old dataset sequence... commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2541 don’t need to trash the sequence features... commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2541 verify sequence features unaffected on dataset... commit | commitdiff | tree | snapshot
2017-10-24 Jim ProcterJAL-2541 assert that alignments sharing references... commit | commitdiff | tree | snapshot
2017-10-24 gmungocJAL-2788 corrected merge error in propertyChange commit | commitdiff | tree | snapshot
2017-10-24 gmungocJAL-2787 set start/end seq explicitly for test commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterJAL-2609 remove unused AlignPanel.fastPaint flag and... commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterJAL-2768 release notes commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterJAL-2739 release notes commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2739' into develop commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterJAL-2682 release notes commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2682parseId' into develop commit | commitdiff | tree | snapshot
2017-10-23 gmungocJAL-2776 repaint everything on toggle group colour bug/JAL-2776toggleGroupColour commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterJAL-2253 release notes commit | commitdiff | tree | snapshot
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2253' into develop commit | commitdiff | tree | snapshot
2017-10-23 gmungocJAL-1854 keep fallthrough but with comment to suppress... commit | commitdiff | tree | snapshot
2017-10-23 gmungocJAL-1854 remove fallthrough of switch case (Checkstyle... commit | commitdiff | tree | snapshot
2017-10-23 gmungocJAL-2737 JAL-1854 corrected package suppressions, updat... commit | commitdiff | tree | snapshot
2017-10-20 Jim ProcterJAL-2779 keep a reference to original Aqua manager... commit | commitdiff | tree | snapshot
2017-10-20 Jim ProcterJAL-2779 remove OSX platform specific import (not neede... commit | commitdiff | tree | snapshot
2017-10-20 Jim ProcterMerge branch 'patch/JAL-547_pid_groovyscript' into... commit | commitdiff | tree | snapshot
2017-10-20 Jim ProcterJAL-547 fix NPE when no selection available commit | commitdiff | tree | snapshot
2017-10-20 Jim ProcterJAL-547 only generate matrix for current selection... commit | commitdiff | tree | snapshot
2017-10-20 Jim ProcterJAL-547 PID script in release notes commit | commitdiff | tree | snapshot
2017-10-20 Jim ProcterMerge branch 'patch/JAL-547_pid_groovyscript' into... commit | commitdiff | tree | snapshot
2017-10-20 Jim ProcterJAL-547 updated the PID script for 2.10.x series score... commit | commitdiff | tree | snapshot
2017-10-20 gmungocJAL-2253 pull up constant, additional unit test bug/JAL-2253 commit | commitdiff | tree | snapshot
2017-10-20 gmungocJAL-2609 fully erase scale above, tidy code change commit | commitdiff | tree | snapshot
2017-10-19 gmungocJAL-2609 adjustments for test findings commit | commitdiff | tree | snapshot
2017-10-19 kiramtMerge branch 'develop' into bug/JAL-2609attemptedmerge commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterJAL-2779 switch order for updating the current alignmen... commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterJAL-2779 remove dead code commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterJAL-2779 hook in our own AquaInternalFrameManager when... commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterJAL-2779 JAL-1551 source formatting commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterJAL-2779 patch so closing most recent frame doesn’t... commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterJAL-2779 original version of AquaInternalFrame Manager commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterJAL-2782 remark about possible exception due to unsafe... commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterJAL-2777 JAL-2773 release notes commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterMerge branch 'bugs/JAL-2777_whitespaceChain' into develop commit | commitdiff | tree | snapshot
2017-10-18 Jim ProcterJAL-2777 remove duplicate code outside conditional... commit | commitdiff | tree | snapshot
2017-10-17 Jim ProcterJAL-2777 release notes commit | commitdiff | tree | snapshot
2017-10-17 Jim ProcterMerge branch 'features/JAL-2773_dontalwaysrecolourstruc... commit | commitdiff | tree | snapshot
2017-10-17 Jim ProcterJAL-2773 renamed flags for clarity commit | commitdiff | tree | snapshot
2017-10-17 Jim ProcterJAL-2777 patch for whitespace chain bugs/JAL-2777_whitespaceChain commit | commitdiff | tree | snapshot
2017-10-17 Jim ProcterJAL-2777 test for the whitespace chain commit | commitdiff | tree | snapshot
2017-10-17 Jim ProcterJAL-2481 patch to fix findFeatureColour for end-of... commit | commitdiff | tree | snapshot
2017-10-17 Jim ProcterJAL-2481 test correct behaviour of findFeatureColour... commit | commitdiff | tree | snapshot
2017-10-17 Jim ProcterJAL-2777 noticed exception raised on construction of... commit | commitdiff | tree | snapshot
2017-10-12 Jim ProcterJAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview commit | commitdiff | tree | snapshot
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