git://source.jalview.org
/
jalview.git
/ shortlog
commit
grep
author
committer
pickaxe
?
search:
re
summary
| shortlog |
log
|
commit
|
commitdiff
|
tree
first
⋅
prev
⋅
next
jalview.git
2019-01-20
Ben Soares
JAL-3141 Changed suffix position to after the extension...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-20
Ben Soares
JAL-3141 Re-added some changes in Jalview2XML missed...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-18
Jim Procter
Merge branch 'feature/JAL-3063jaxbNoCastor' into featur...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-18
Jim Procter
Merge branch 'develop' into feature/JAL-3063jaxbNoCastor
commit
|
commitdiff
|
tree
|
snapshot
2019-01-18
gmungoc
JAL-3143 'id' not 'ID' attribute drives generation...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-17
Jim Procter
JAL-3116 clear out whitespace when materialising Sequen...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-16
Ben Soares
JAL-3141 Remove no longer used exampleLabel
commit
|
commitdiff
|
tree
|
snapshot
2019-01-16
Jim Procter
Merge branch 'feature/JAL-3063jaxbNoCastor' into develop
commit
|
commitdiff
|
tree
|
snapshot
2019-01-16
Jim Procter
Merge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JA...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-15
Jim Procter
JAL-1767 test that changing view association for PCA...
features/pca_jaxb_datasetrefs_JAL-3171_JAL-3063_JAL-1767
commit
|
commitdiff
|
tree
|
snapshot
2019-01-15
Jim Procter
JAL-1767 refactor associated view logic to public metho...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-15
Jim Procter
JAL-1767 patch buggy PCA view association test
commit
|
commitdiff
|
tree
|
snapshot
2019-01-14
Ben Soares
JAL-3141 Forgot this file, sorry!
commit
|
commitdiff
|
tree
|
snapshot
2019-01-14
Ben Soares
JAL-3141 Added a 'Save Project as...' File menu item...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-14
Ben Soares
JAL-3141 Made more constants
commit
|
commitdiff
|
tree
|
snapshot
2019-01-14
gmungoc
JAL-3186 remove Variable Colour from popup menu
commit
|
commitdiff
|
tree
|
snapshot
2019-01-14
gmungoc
JAL-3186 remove duplicate message keys
commit
|
commitdiff
|
tree
|
snapshot
2019-01-14
gmungoc
JAL-2069 wider dialog so all fields show!
commit
|
commitdiff
|
tree
|
snapshot
2019-01-14
gmungoc
JAL-2069 clear any error colour when setting threshold...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-14
gmungoc
JAL-3125 tidy up
commit
|
commitdiff
|
tree
|
snapshot
2019-01-14
gmungoc
JAL-3125 avoid slider 'rounding' threshold field value
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Ben Soares
JAL-3141 removed redundant method to tests
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Jim Procter
JAL-1767 failing test to check if the PCA view associat...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into features/pca_j...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into feature/JAL...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Jim Procter
JAL-3063 remove stale JAXB binding POJO
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into features/pca_j...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into feature/JAL...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Jim Procter
JAL-3063 - ant task for regenerating JAXB schema -...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Ben Soares
JAL-3141 language word ending corrections
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Ben Soares
JAL-3141 Added i18n for the example filenames in Prefer...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Ben Soares
JAL-3141 forgot to add this file after extracting the...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-09
Ben Soares
JAL-3141 Made one more suggested change from code review
commit
|
commitdiff
|
tree
|
snapshot
2019-01-08
Ben Soares
JAL-3141 Made some more suggested changes from code...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-08
Ben Soares
JAL-3141 Made some suggested changes from code review
commit
|
commitdiff
|
tree
|
snapshot
2019-01-08
gmungoc
JAL-3180 Disabled 'By Annotation' group colour menu...
feature/JAL-3180colourAnnotationMenu
commit
|
commitdiff
|
tree
|
snapshot
2019-01-04
gmungoc
JAL-3180 fix By Annotation selection state in colour...
commit
|
commitdiff
|
tree
|
snapshot
2019-01-04
gmungoc
JAL-3181 refactor: extracted buildLinkMenu() for testab...
feature/JAL-3181linkOrdering
commit
|
commitdiff
|
tree
|
snapshot
2019-01-04
gmungoc
JAL-3181 simplified code and test
commit
|
commitdiff
|
tree
|
snapshot
2019-01-03
gmungoc
JAL-3181 order link menu items
commit
|
commitdiff
|
tree
|
snapshot
2019-01-03
gmungoc
JAL-1889 additional test for clover-added fields
commit
|
commitdiff
|
tree
|
snapshot
2019-01-03
gmungoc
JAL-1889 ignore 'synthetic' fields added for jacoco
commit
|
commitdiff
|
tree
|
snapshot
2018-12-21
gmungoc
JAL-1767 minimise local variable scope
commit
|
commitdiff
|
tree
|
snapshot
2018-12-20
Jim Procter
JAL-1767 port save/load PCA panel to JAXB - JAL-3063
commit
|
commitdiff
|
tree
|
snapshot
2018-12-20
Jim Procter
JAL-3171 JAL-3063 merge updates from JAL-1767
commit
|
commitdiff
|
tree
|
snapshot
2018-12-19
Jim Procter
Merge branch 'features/JAL-1767pcaInProject' into bug...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-19
gmungoc
JAL-2621 Overview uses hand cursor in drag box, crossha...
bug/JAL-2621
commit
|
commitdiff
|
tree
|
snapshot
2018-12-19
gmungoc
JAL-3178 include non-positional features in their group...
bug/JAL-2791exportFilteredFeature
commit
|
commitdiff
|
tree
|
snapshot
2018-12-19
gmungoc
JAL-2791 JAL-2808 correct Javadoc for api method
commit
|
commitdiff
|
tree
|
snapshot
2018-12-19
gmungoc
JAL-3032 ignore /site also on non-JS branches
commit
|
commitdiff
|
tree
|
snapshot
2018-12-18
Jim Procter
JAL-2846 ahem - proper release note for this fix from...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-18
Jim Procter
JAL-3178 known defect in release notes
commit
|
commitdiff
|
tree
|
snapshot
2018-12-18
Ben Soares
JAL-3130 added a javac helper script too (like the...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
JAL-3111 JAL-2846 release notes
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
Merge branch 'bug/JAL-2846' into develop
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
JAL-3111 tweaked release notes and documented JAL-2864
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
Merge branch 'bug/JAL-2864nullOverviewCanvas' into...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
JAL-2865 release notes
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
Merge branch 'bug/JAL-2750' into develop
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
Merge branch 'task/JAL-3174_fixed_filename_tests' into...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
JAL-3174 backout un-needed stacktrace for exception...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Ben Soares
JAL-3174 Merging in some test filename-case fixes
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
Merge branch 'bug/JAL-2541cutRelocateFeatures' into...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
JAL-2541 JAL-2822 release notes
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
JAL-3111 bump release 2.11 release to January 2019
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Jim Procter
Merge branch 'develop' into bug/JAL-2541cutRelocateFeatures
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Ben Soares
JAL-3130 java bash wrapper to choose which java to...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-17
Ben Soares
JAL-3130 Some fixes to ant build xml, and the modules...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-14
Jim Procter
JAL-3171 dataset reference tests now in Functional...
bug/JAL-3171_maintain_datasets_across_views
commit
|
commitdiff
|
tree
|
snapshot
2018-12-14
Jim Procter
JAL-3171 record mapping between unmarshalled sequence...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-14
Jim Procter
JAL-3171 raise warning when a dataset reference exists...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-14
Jim Procter
JAL-3171 more complex project test - where sequences...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-14
Jim Procter
JAL-3171 resolve dataset for imported projects via...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-14
Jim Procter
JAL-3171 failing test for legacy projects and fixing...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-14
Jim Procter
JAL-3171 register existing dataset for new view
commit
|
commitdiff
|
tree
|
snapshot
2018-12-14
Jim Procter
JAL-3171 failing test checking preservation of dataset
commit
|
commitdiff
|
tree
|
snapshot
2018-12-14
Ben Soares
JAL-3130 single class testing on CLI with ant [ -Dclass...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-13
Ben Soares
JAL-3130 Fixing a few more tests that pass on a Mac...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-13
Ben Soares
JAL-3130 Use non-deprecated check for Mac CMD key press
commit
|
commitdiff
|
tree
|
snapshot
2018-12-13
Ben Soares
JAL-3130 Attempting to fix 8 tests that pass on a Mac...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-11
Ben Soares
JAL-3130 Turns out Quit/About/Preferences handlers...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-10
Ben Soares
JAL-3130 another tweak for bamboo to add the JDK jmods...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-10
Ben Soares
JAL-3130 build.xml tweaks for clover-3.4.1
commit
|
commitdiff
|
tree
|
snapshot
2018-12-10
gmungoc
JAL-1421 added type to List and Vector
feature/JAL-3169cancelOverwrite
commit
|
commitdiff
|
tree
|
snapshot
2018-12-10
gmungoc
JAL-3169 leave file browser open on Cancel in overwrite...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-10
Ben Soares
JAL-3130 tweaked build.xml to do java 11 bytecode compi...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-07
Ben Soares
JAL-3130 Some re-reorganisation for build process
commit
|
commitdiff
|
tree
|
snapshot
2018-12-06
Ben Soares
JAL-3130 incorporating feature/JAL-3063jaxbNoCastor...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-06
gmungoc
JAL-1854 fix Checkstyle import violations
commit
|
commitdiff
|
tree
|
snapshot
2018-12-06
gmungoc
JAL-1854 Checkstyle updated to 8.12
commit
|
commitdiff
|
tree
|
snapshot
2018-12-03
Ben Soares
JAL-3130 de-multi-release-jar.sh Script to make multi...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-03
gmungoc
JAL-3063 Castor removed from codebase
commit
|
commitdiff
|
tree
|
snapshot
2018-12-03
gmungoc
Merge branch 'feature/JAL-3063JAXB' into feature/JAL...
commit
|
commitdiff
|
tree
|
snapshot
2018-12-03
Ben Soares
JAL-3130 Added flagged runtime 'Reflection' check on...
commit
|
commitdiff
|
tree
|
snapshot
2018-11-30
Ben Soares
JAL-3130 refactored a lot of this. See the JAVA-11...
commit
|
commitdiff
|
tree
|
snapshot
2018-11-30
gmungoc
JAL-2420 don't offer Reveal All over alignment panel
bug/JAL-2420revealAllMenu
commit
|
commitdiff
|
tree
|
snapshot
2018-11-30
gmungoc
JAL-3166 catch NPE if all sequences are hidden
bug/JAL-3166npeAllRowsHidden
commit
|
commitdiff
|
tree
|
snapshot
2018-11-29
gmungoc
JAL-3140 updated IntervalStore jar
commit
|
commitdiff
|
tree
|
snapshot
2018-11-29
gmungoc
JAL-3140 named tagged version of intervalstore.jar
commit
|
commitdiff
|
tree
|
snapshot
2018-11-29
gmungoc
JAL-3140 NCList now via IntervalStore library
commit
|
commitdiff
|
tree
|
snapshot
next