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jalview-manual.git
2017-11-17
Suzanne Duce
Just spooted a slight format issue
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2017-11-17
Suzanne Duce
This is the third manual commit. I checked the exercise...
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2017-11-16
Suzanne Duce
Modified some of the exercises esp the tree and pca...
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2017-11-10
Suzanne Duce
I am committing the edits to the main body of the text...
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2017-02-20
Jim Procter
version 1.9 of jalview manual
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2017-02-20
Jim Procter
update version to 1.9, and date to today.
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2017-02-20
Jim Procter
Updated info on PCA calculation (SeqSpace vs BLOSUM62)
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2017-02-19
Jim Procter
minor rewording, typo fixes, and more complete introduc...
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2017-02-15
Suzanne Duce
Made changes to improve layout of manual
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2017-02-15
Suzanne Duce
Changed JNet to JPred in manual
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2017-02-03
Suzanne Duce
Correct a few typos.
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2016-12-14
Suzanne Duce
Updated the some of the images in the manual
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2016-10-12
Jim Procter
dropped out some sections for Glasgow 2016, and quick...
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2016-10-12
Jim Procter
More exercise tweaks - regularise warnings/platform...
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2016-10-11
Jim Procter
hints should always be placed on a new line in the...
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2016-10-11
Jim Procter
tweak formating before editing exercises.
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2016-10-11
Jim Procter
replaced all instances of 'dialogue' with 'dialog'.
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2016-10-10
Jim Procter
crop to make close all figure (sec 1.3 after Fig 1...
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2016-10-07
Suzanne Duce
I have implemented more of Kira's suggestions. Some...
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2016-10-07
Suzanne Duce
I have changed the manual in light of Kira's comments.
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2016-09-28
Suzanne Duce
Just updating the date on the manual
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2016-09-16
Suzanne Duce
I have proof read manual after yesterday edits and...
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2016-09-15
Suzanne Duce
I am committing this edits even though there are some...
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2016-09-01
Suzanne Duce
(A) Polishing the exercises that I have recently create...
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2016-06-09
Suzanne Duce
Changed pca exercise.
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2016-06-09
Suzanne Duce
I have correct principle/principal typos in four locati...
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2016-05-13
Suzanne Duce
Change wording in MSA section about ordering sequences
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2016-05-13
Suzanne Duce
Added annotation sections and made few minor changes.
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2016-02-18
Suzanne Duce
Changes for Feb 2016 SLS course
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2015-05-01
Suzanne Duce
I have gone through all the exercises in the manual...
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2015-04-30
Suzanne Duce
thursday edits to manual
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2015-04-24
Suzanne Duce
Reading the pdf I noticed an error in my edits for...
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2015-04-24
Suzanne Duce
I have added my corrections to chapter 1.
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2015-04-24
Suzanne Duce
Changes added after the London 2014 workshop
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2014-12-19
Suzanne Duce
Added Mungo's edits and standardised layout
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2014-12-12
Jim Procter
update version/date
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2014-12-12
Jim Procter
commented out defunct exercises, added others, tweaked...
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2014-12-12
Jim Procter
new figures for RNA section
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2014-12-06
Suzanne Duce
SLD has completed her text and exercise edits in Chapter 1.
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2014-12-05
Suzanne Duce
90% of chapter 1 edits for London workshop. Though...
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2014-12-05
Suzanne Duce
second commit (to test the process)
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2014-12-05
Suzanne Duce
Updates for London 2014 workshop
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2013-04-07
Jim Procter
included instructions to use ps2pdf to reduce the size...
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2013-02-01
Jim Procter
v1.4.1 manual
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2013-02-01
Jim Procter
Manual version 1.4.1 updated 18th January for Version...
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2013-02-01
Jim Procter
v2.8 new website and logo
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2013-02-01
Jim Procter
v 2.8 logo and new top level help page
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2013-02-01
Jim Procter
v 2.8 logo and authors
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2013-02-01
Jim Procter
v 2.8 capabilitis
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2013-02-01
Jim Procter
v2.8 new database selector for sequence fetcher
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2013-02-01
Jim Procter
2.8 per sequence annotation colouring
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2013-02-01
Jim Procter
2.8 colourschemes
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2013-02-01
Jim Procter
revised pca in v2.8
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2013-02-01
Jim Procter
alignment services in v2.8
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2013-02-01
Jim Procter
v2.8 jabaws config with server status
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2013-02-01
Jim Procter
v2.8 ws menu
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2013-02-01
Jim Procter
v2.8 sequence disorder
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2013-02-01
Jim Procter
v2.8 sequence details window
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2013-02-01
Jim Procter
ignore intermediate files
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2013-01-10
Jim Procter
updated tutorial for Jalview 2.7 - includes contributio...
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2011-12-05
Jim Procter
update to 1.3.01
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2011-12-05
Jim Procter
fix left-right page numbering and incorrect menu item
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2011-11-29
Jim Procter
updated screen optimized version
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2011-11-29
Jim Procter
updated master document with dna alignment tools table
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2011-11-29
Jim Procter
completed table of jabaws alignment services useful...
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2011-11-28
Jim Procter
jalview manual v1.3 - updated for v2.7 of Jalview with...
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2011-11-28
Jim Procter
drag and drop association of PDB structures
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2011-11-28
Jim Procter
colour by .. submenu figure
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2011-11-28
Jim Procter
dnmt1_mouse complex domain alignment colouring example
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2011-11-28
Jim Procter
jv2.7 rss newsreader
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2011-11-28
Jim Procter
jabaws config panel in jalview preferences
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2011-11-28
Jim Procter
jv2.7 capabilities diagram
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2011-11-28
Jim Procter
alignment web service parameters from html help
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2011-11-28
Jim Procter
ferredoxin structure superposition
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2011-11-28
Jim Procter
slider from clustal parameters
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2011-11-28
Jim Procter
v2.7 splash screen
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2011-11-28
Jim Procter
v2.7 startup screen
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2011-11-28
Jim Procter
jaba style alignment submission
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2011-11-28
Jim Procter
reordered web services menu
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2011-11-28
Jim Procter
files for superposition exercises
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2011-05-06
Jim Procter
rude typo fixed
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2011-03-04
Jim Procter
patches from Dundee Tutorial on Feb 2011
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2011-03-04
Jim Procter
patches from Dundee Tutorial on Feb 2011
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2010-10-11
Jim Procter
patched layout and fixed some typos noticed by tutee...
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2010-10-11
Jim Procter
patched layout and fixed some typos noticed by tutee...
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2010-06-14
Jim Procter
spellchecking
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2010-06-08
Jim Procter
jalview 2.5 updates
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2009-01-09
Jim Procter
screen optimized PDF
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2009-01-09
Jim Procter
Settings for screen optimized PDF
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2009-01-09
Jim Procter
removed enfin fp workshop from front page
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2008-08-30
Jim Procter
final version (draft) for EBI/Enfin Function Prediction...
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2008-08-30
Jim Procter
more ignores
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2008-08-30
Jim Procter
resized
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2008-08-30
Jim Procter
updated example PFAM accession
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2008-08-28
Jim Procter
first ebi tutorial draft for 2.4 release
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2008-08-14
Jim Procter
original tutorial put online for version 2.2
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