fr.orsay.lri.varna.models.rna
Class RNA.DrawRNATemplateMethod
java.lang.Object
fr.orsay.lri.varna.models.rna.RNA.DrawRNATemplateMethod
- Enclosing class:
- RNA
public static class RNA.DrawRNATemplateMethod
- extends Object
What to do in case some helices are of a different length
in the template and the actual helix.
Possibles values are:
0 - No adjustment is done.
A longer than expected helix might bump into an other helix.
1 - Scaling factors (actual length / template length) are calculated,
the maximum scaling factor L is extracted, then all helix positions
are multiplied by L.
2 - Same as 1, but L is computed as the minimum value such that there
are no backbone intersections.
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
NOADJUST
public static int NOADJUST
MAXSCALINGFACTOR
public static int MAXSCALINGFACTOR
NOINTERSECT
public static int NOINTERSECT
HELIXTRANSLATE
public static int HELIXTRANSLATE
RNA.DrawRNATemplateMethod
public RNA.DrawRNATemplateMethod()