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_
_
_ajustement
- Variable in class fr.orsay.lri.varna.models.rna.
Motif
_algo
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_an
- Variable in class fr.orsay.lri.varna.views.
VueChemProbAnnotation
_an
- Variable in class fr.orsay.lri.varna.views.
VueHighlightRegionEdit
_ancrage
- Variable in class fr.orsay.lri.varna.models.annotations.
TextAnnotation
_angle
- Variable in class fr.orsay.lri.varna.models.annotations.
TextAnnotation
_angle
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RotateRNAEdit
_anim
- Variable in class fr.orsay.lri.varna.views.
VueAboutPanel
_annotations
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_appartenance
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBasesComparison
This ModeleBasesComparison owning statement.
_autoCenter
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_autoFit
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_autoHelices
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_autoInteriorLoops
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_autoTerminalLoops
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_auxBPs
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_backboneColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_backboneColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_backgroundColor
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_backgroundColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_backgroundColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_backup
- Variable in class fr.orsay.lri.varna.views.
VueBaseValues
_backup
- Variable in class fr.orsay.lri.varna.views.
VueBPList
_backup
- Variable in class fr.orsay.lri.varna.views.
VueChemProbAnnotation
_backup
- Variable in class fr.orsay.lri.varna.views.
VueColorMapStyle
_backup
- Variable in class fr.orsay.lri.varna.views.
VueHighlightRegionEdit
_backupCenters
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RedrawEdit
_backupCoords
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RedrawEdit
_backupSelection
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_backupThicknesses
- Variable in class fr.orsay.lri.varna.views.
VueBPThickness
_base
- Variable in class fr.orsay.lri.varna.models.export.
CircleCommand
_base
- Variable in class fr.orsay.lri.varna.models.export.
FillCircleCommand
_base
- Variable in class fr.orsay.lri.varna.models.export.
TextCommand
_base
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.HelixRotateEdit
_base1
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBasesComparison
The base of the first RNA associated with the base of the second RNA.
_base2
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBasesComparison
The base of the second RNA associated with the base of the first RNA.
_base_inner_color
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleStyleBase
_base_name_color
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleStyleBase
_base_number_color
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleStyleBase
_base_outline_color
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleStyleBase
_baseInnerColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_baseNameColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_baseNumColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_baseOutlineColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_bases
- Variable in class fr.orsay.lri.varna.models.annotations.
HighlightRegionAnnotation
_bases
- Variable in class fr.orsay.lri.varna.models.
BaseList
_basesStyleList
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_baseThickness
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_bb
- Variable in class fr.orsay.lri.varna.models.export.
SVGExport
_bent
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBPStyle
_blink
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_bondColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_bondColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_border
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_border
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_BP
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
_bpHeightIncrement
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_bpHeightIncrement
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_bpIncrement
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_bpseqFilter
- Variable in class fr.orsay.lri.varna.views.
VueUI
_bpStyle
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_bpThickness
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_btn
- Variable in class fr.orsay.lri.varna.components.
ActionEditor
_buffer
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_c
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBaseNucleotide
_caption
- Variable in class fr.orsay.lri.varna.models.
BaseList
_cb
- Variable in class fr.orsay.lri.varna.views.
VueColorMapStyle
_center
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
The nearest loop center of this InterfaceBase.
_checked
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
_ChemProbAnnotations
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_chemProbs
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_children
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.HelixEmbedding
_clip
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.HelixEmbedding
_cm
- Variable in enum fr.orsay.lri.varna.models.rna.
ModeleColorMap.NamedColorMapTypes
_cm
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_cmb
- Variable in class fr.orsay.lri.varna.views.
VueStyleBP
_code
- Variable in class fr.orsay.lri.varna.views.
VueColorMapStyle
_color
- Variable in class fr.orsay.lri.varna.models.annotations.
ChemProbAnnotation
_color
- Variable in class fr.orsay.lri.varna.models.annotations.
TextAnnotation
_color
- Variable in class fr.orsay.lri.varna.models.export.
ColorCommand
_color
- Variable in class fr.orsay.lri.varna.models.export.
FillCircleCommand
_color
- Variable in class fr.orsay.lri.varna.models.export.
FillPolygonCommand
_color
- Variable in class fr.orsay.lri.varna.models.export.
SecStrProducerGraphics
_color
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBPStyle
_colorDashBases
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_colorie
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
TRUE if this InterfaceBase has to be colored, else FALSE.
_colorMapCaption
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_colorMapCaption
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_colorMapHeight
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
Various options.
_colorMapStyle
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_colorMapValues
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_colorMapWidth
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_colorMapXOffset
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_colorMapYOffset
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_colorSpecialBases
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_commands
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_commands
- Static variable in class fr.orsay.lri.varna.models.rna.
ModeleBaseNucleotide
_comparisonMode
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_comparisonMode
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_conf
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_connections
- Variable in class fr.orsay.lri.varna.models.naView.
Loop
_contentPanel
- Variable in class fr.orsay.lri.varna.components.
VARNAConsole
_controlerMenu
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_controleurSpecialColorEditor
- Variable in class fr.orsay.lri.varna.components.
BaseSpecialColorEditor
_controleurVueAnnotation
- Variable in class fr.orsay.lri.varna.views.
VueAnnotation
_coords
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
The coordinate representation of this InterfaceBase on the final graphic.
_ctFilter
- Variable in class fr.orsay.lri.varna.views.
VueUI
_curColor
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_currentModel
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_customBases
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_customBPs
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_dashBasesColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_dashBasesColor
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_dashedStroke
- Variable in class fr.orsay.lri.varna.models.export.
SwingGraphics
_dbnFilter
- Variable in class fr.orsay.lri.varna.views.
VueUI
_debug
- Variable in class fr.orsay.lri.varna.models.export.
SwingGraphics
_debug
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_debugShape
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_decalage
- Variable in class fr.orsay.lri.varna.models.rna.
Motif
_defaultRNA
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_definedCols
- Variable in class fr.orsay.lri.varna.models.export.
XFIGExport
_delta
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.HelixRotateEdit
_depth
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw
_dest
- Variable in class fr.orsay.lri.varna.models.export.
LineCommand
_dims
- Variable in class fr.orsay.lri.varna.models.export.
RectangleCommand
_disabled
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_distNumbers
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_drawBackbone
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_drawBackbone
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_drawBackground
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_drawBBox
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_drawBorder
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_drawColorMap
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_drawColorMap
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_drawMode
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
The draw algorithm mode
_drawn
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_drawNC
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_drawnNonCanonicalBP
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_drawnNonPlanarBP
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_drawOutlineBase
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_drawTertiary
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_dx
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.BasesShiftEdit
_dy
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.BasesShiftEdit
_edge3
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBP
_edge3
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_edge3
- Variable in class fr.orsay.lri.varna.views.
VueBPType
_edge5
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBP
_edge5
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_edge5
- Variable in class fr.orsay.lri.varna.views.
VueBPType
_elementStructure
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
The structure information associated with this InterfaceBase.
_end1
- Variable in class fr.orsay.lri.varna.models.naView.
Region
_end2
- Variable in class fr.orsay.lri.varna.models.naView.
Region
_epsFilter
- Variable in class fr.orsay.lri.varna.views.
VueUI
_error
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_errorsOn
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_fileChooserDirectory
- Variable in class fr.orsay.lri.varna.views.
VueUI
_fillBase
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_fillColor
- Variable in class fr.orsay.lri.varna.models.annotations.
HighlightRegionAnnotation
_firstFocus
- Variable in class fr.orsay.lri.varna.components.
VARNAConsole
_firstModel
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_firstSequence
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_firstStructure
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_flatExteriorLoop
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_flatExteriorLoop
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_font
- Variable in class fr.orsay.lri.varna.models.annotations.
TextAnnotation
_font
- Variable in class fr.orsay.lri.varna.models.export.
FontCommand
_font
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_font
- Variable in class fr.orsay.lri.varna.models.export.
XFIGExport
_fontBasesGeneral
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_fontsize
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_fontsize
- Variable in class fr.orsay.lri.varna.models.export.
SVGExport
_fromSlider
- Variable in class fr.orsay.lri.varna.views.
VueHighlightRegionEdit
_g2d
- Variable in class fr.orsay.lri.varna.models.export.
SwingGraphics
_gapsColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_gp
- Variable in class fr.orsay.lri.varna.views.
VueColorMapStyle
_h
- Variable in class fr.orsay.lri.varna.models.naView.
NAView
_h
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.HelixFlipEdit
_h
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.HelixRotateEdit
_helices
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_helixID
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_highlightAnnotation
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_highlightRegion
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_horsCadre
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_hoverColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_hoveredBase
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_i
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.AddBPEdit
_i
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RemoveBPEdit
_id
- Variable in enum fr.orsay.lri.varna.models.rna.
ModeleColorMap.NamedColorMapTypes
_id
- Variable in class fr.orsay.lri.varna.models.templates.
RNATemplate.RNATemplateElement
_id3
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_id5
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inBondOrientation
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inBP
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inBP3
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inBP5
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_index
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBaseNucleotide
_index
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBasesComparison
This base's offset in the sequence
_index
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.SingleBaseMoveEdit
_indices
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.HelixEmbedding
_indices
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.BasesShiftEdit
_inEdge3
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inEdge5
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inHelix
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inLength
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inPosition
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_input
- Variable in class fr.orsay.lri.varna.components.
VARNAConsole
_inSequence
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inSequenceIDs
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_inStrAnnotation
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_intensity
- Variable in class fr.orsay.lri.varna.models.annotations.
ChemProbAnnotation
_interpolator
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_invMapping
- Variable in class fr.orsay.lri.varna.models.rna.
Mapping
_isCustomColored
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBPStyle
_isNull
- Variable in class fr.orsay.lri.varna.models.naView.
Connection
_itemFlatExteriorLoop
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_itemOptionBondsColored
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_itemOptionGapsBaseColored
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_itemOptionSpecialBaseColored
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_itemShowColorMap
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_itemShowNCBP
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_itemShowOnlyPlanar
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_itemShowWarnings
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_j
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.AddBPEdit
_j
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RemoveBPEdit
_jpgFilter
- Variable in class fr.orsay.lri.varna.views.
VueUI
_lastSelectedCoord
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_len
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.PairedPortion
_len
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.UnpairedPortion
_length
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_linkDestination
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_linkOrigin
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_listeAnnotations
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_listeBases
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
the base list
_listeBasesM
- Variable in class fr.orsay.lri.varna.models.rna.
Motif
_listeRegionHighlights
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_listeVARNAListener
- Variable in class fr.orsay.lri.varna.models.naView.
NAView
_listeVARNAListener
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_listStrands
- Variable in class fr.orsay.lri.varna.models.rna.
Motif
_listStrands
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
the strand list
_mainBPStyle
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_mainSurface
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_manager
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_map
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleColorMap
_mapping
- Variable in class fr.orsay.lri.varna.models.rna.
Mapping
_mbfst
- Variable in class fr.orsay.lri.varna.models.annotations.
ChemProbAnnotation
_mbsnd
- Variable in class fr.orsay.lri.varna.models.annotations.
ChemProbAnnotation
_mcm
- Variable in class fr.orsay.lri.varna.components.
GradientEditorPanel
_ml
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.HelixRotateEdit
_mode
- Variable in class fr.orsay.lri.varna.views.
VueBases
_modifiable
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_modifiable
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_msbp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.AddBPEdit
_msbp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RemoveBPEdit
_msbp
- Variable in class fr.orsay.lri.varna.views.
VueBPThickness
_msbp
- Variable in class fr.orsay.lri.varna.views.
VueBPType
_name
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_name
- Variable in class fr.orsay.lri.varna.models.templates.
RNATemplate.RNATemplateHelix
_name
- Variable in class fr.orsay.lri.varna.models.templates.
RNATemplate.RNATemplateUnpairedSequence
_nearestBase
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_newFlat
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RedrawEdit
_newMode
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RedrawEdit
_nextColCode
- Variable in class fr.orsay.lri.varna.models.export.
XFIGExport
_nonStandardColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_normalBases
- Static variable in class fr.orsay.lri.varna.models.rna.
RNA
_numbersFont
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_numColumns
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_numPairedPortions
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.RNATree
_numPeriod
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_numRows
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_numStrand
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
Numero du brin auquel la base appartient.
_nx
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.SingleBaseMoveEdit
_ny
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.SingleBaseMoveEdit
_offsetPanel
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_offsetRNA
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_offX
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_offY
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_optionProducer
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_orientation
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_orientation
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_orig
- Variable in class fr.orsay.lri.varna.models.export.
LineCommand
_orig
- Variable in class fr.orsay.lri.varna.models.export.
RectangleCommand
_out
- Variable in class fr.orsay.lri.varna.models.annotations.
ChemProbAnnotation
_outlineColor
- Variable in class fr.orsay.lri.varna.models.annotations.
HighlightRegionAnnotation
_output
- Variable in class fr.orsay.lri.varna.components.
VARNAConsole
_over
- Variable in class fr.orsay.lri.varna.views.
VueAboutPanel.AboutAnimator
_ox
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.SingleBaseMoveEdit
_oy
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.SingleBaseMoveEdit
_p
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.HelixEmbedding
_parent
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.HelixEmbedding
_partner3
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBP
_partner5
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBP
_period
- Variable in class fr.orsay.lri.varna.views.
VueAboutPanel.AboutAnimator
_periodResNum
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_plainStroke
- Variable in class fr.orsay.lri.varna.models.export.
SwingGraphics
_pLimL
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.HelixRotateEdit
_pLimR
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.HelixRotateEdit
_pngFilter
- Variable in class fr.orsay.lri.varna.views.
VueUI
_points
- Variable in class fr.orsay.lri.varna.models.export.
FillPolygonCommand
_points
- Variable in class fr.orsay.lri.varna.models.export.
PolygonCommand
_popup
- Variable in class fr.orsay.lri.varna.
VARNAPanel
If comparison mode is TRUE (ON), then the application will be used to display a super-structure resulting on an RNA secondary structure comparison.
_portions
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.RNATree
_pos
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.UnpairedPortion
_pos1
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.PairedPortion
_pos2
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.PairedPortion
_premierAffichage
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_prevFlat
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RedrawEdit
_prevMode
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RedrawEdit
_quitButton
- Variable in class fr.orsay.lri.varna.components.
VARNAConsole
_quitPanel
- Variable in class fr.orsay.lri.varna.components.
VARNAConsole
_r
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.HelixEmbedding
_r
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.PairedPortion
_radius
- Variable in class fr.orsay.lri.varna.models.annotations.
HighlightRegionAnnotation
_radius
- Variable in class fr.orsay.lri.varna.models.export.
CircleCommand
_radius
- Variable in class fr.orsay.lri.varna.models.export.
FillCircleCommand
_realCenters
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_realCoords
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_realIndex
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
_rna
- Variable in class fr.orsay.lri.varna.models.rna.
Motif
_RNA
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_RNAListeners
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_rnd
- Static variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw
_rotation
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_rotation
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_scale
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_scaleFactor
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_scrolls
- Variable in class fr.orsay.lri.varna.components.
VARNAConsole
_secondSequence
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_secondStructure
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_selected
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleStyleBase
_selectedAnnotation
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_selectedBases
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_selectedIndex
- Variable in class fr.orsay.lri.varna.components.
GradientEditorPanel
_selectionListeners
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_selectionMenuIndex
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_selectionRectangle
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_sequence
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_sequenceIDs
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_sequences
- Variable in class fr.orsay.lri.varna.views.
VueAboutPanel.AboutAnimator
_showWarnings
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_size
- Variable in class fr.orsay.lri.varna.models.export.
FontCommand
_spaceBetweenBases
- Variable in class fr.orsay.lri.varna.models.rna.
Motif
_spaceBetweenBases
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_spawnOrigin
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_specialBasesColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_ss
- Variable in class fr.orsay.lri.varna.models.export.
SecStrProducerGraphics
_sseq
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_sstruct
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_start1
- Variable in class fr.orsay.lri.varna.models.naView.
Region
_start2
- Variable in class fr.orsay.lri.varna.models.naView.
Region
_stericity
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBP
_stericity
- Variable in class fr.orsay.lri.varna.views.
VueBPType
_strand
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleStrand
_strandEndsAnnotated
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
_struct
- Variable in class fr.orsay.lri.varna.models.rna.
StructureTemp
_structure
- Variable in class fr.orsay.lri.varna.models.rna.
RNAMLParser
_structureAux
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
Additional bonds and info can be specified here.
_structures
- Variable in class fr.orsay.lri.varna.views.
VueAboutPanel.AboutAnimator
_style
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBP
_styleBase
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
The base style.
_subMenuBases
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_subscripts
- Static variable in class fr.orsay.lri.varna.models.rna.
ModeleBaseNucleotide
_superscripts
- Static variable in class fr.orsay.lri.varna.models.rna.
ModeleBaseNucleotide
_support
- Variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw.HelixEmbedding
_svgFilter
- Variable in class fr.orsay.lri.varna.views.
VueUI
_textArea
- Variable in class fr.orsay.lri.varna.views.
VueAboutPanel
_texte
- Variable in class fr.orsay.lri.varna.models.annotations.
TextAnnotation
_textPanel
- Variable in class fr.orsay.lri.varna.views.
VueAboutPanel
_thickness
- Variable in class fr.orsay.lri.varna.models.export.
CircleCommand
_thickness
- Variable in class fr.orsay.lri.varna.models.export.
FillCircleCommand
_thickness
- Variable in class fr.orsay.lri.varna.models.export.
LineCommand
_thickness
- Variable in class fr.orsay.lri.varna.models.export.
PolygonCommand
_thickness
- Variable in class fr.orsay.lri.varna.models.export.
RectangleCommand
_thickness
- Variable in class fr.orsay.lri.varna.models.export.
SecStrProducerGraphics
_thickness
- Variable in class fr.orsay.lri.varna.models.export.
SVGExport
_thickness
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBPStyle
_thicknessSlider
- Variable in class fr.orsay.lri.varna.views.
VueBPThickness
_title
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_title
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_titleColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_titleColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_titleFont
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_titleHeight
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_titleSize
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_tm
- Variable in class fr.orsay.lri.varna.views.
VueBaseValues
_tm
- Variable in class fr.orsay.lri.varna.views.
VueBPList
_toSlider
- Variable in class fr.orsay.lri.varna.views.
VueHighlightRegionEdit
_translation
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_txt
- Variable in class fr.orsay.lri.varna.models.export.
TextCommand
_type
- Variable in class fr.orsay.lri.varna.models.annotations.
ChemProbAnnotation
_typeAncrage
- Variable in class fr.orsay.lri.varna.models.annotations.
TextAnnotation
_UI
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_undoableEditSupport
- Variable in class fr.orsay.lri.varna.views.
VueUI
_URL
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_useBaseColorsForBPs
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_useBaseNameColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_useBaseNumbersColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_useBaseOutlineColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_useGapsColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_useInnerBaseColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_useNonStandardColor
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_value
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleBase
_values
- Variable in class fr.orsay.lri.varna.models.rna.
ModeleColorMap
_varnaFilter
- Variable in class fr.orsay.lri.varna.views.
VueUI
_VARNAListeners
- Variable in class fr.orsay.lri.varna.
VARNAPanel
_VARNAPanelList
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_vp
- Variable in class fr.orsay.lri.varna.components.
VARNAConsole
_vp
- Static variable in class fr.orsay.lri.varna.models.rna.
VARNASecDraw
_vp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.AddBPEdit
_vp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.BasesShiftEdit
_vp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.HelixFlipEdit
_vp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.HelixRotateEdit
_vp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RedrawEdit
_vp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RemoveBPEdit
_vp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.RotateRNAEdit
_vp
- Variable in class fr.orsay.lri.varna.models.
VARNAEdits.SingleBaseMoveEdit
_vp
- Variable in class fr.orsay.lri.varna.views.
VueAboutPanel.AboutAnimator
_vp
- Variable in class fr.orsay.lri.varna.views.
VueAnnotation
_vp
- Variable in class fr.orsay.lri.varna.views.
VueBases
_vp
- Variable in class fr.orsay.lri.varna.views.
VueBaseValues
_vp
- Variable in class fr.orsay.lri.varna.views.
VueBorder
_vp
- Variable in class fr.orsay.lri.varna.views.
VueBPHeightIncrement
_vp
- Variable in class fr.orsay.lri.varna.views.
VueBPList
_vp
- Variable in class fr.orsay.lri.varna.views.
VueBPThickness
_vp
- Variable in class fr.orsay.lri.varna.views.
VueBPType
_vp
- Variable in class fr.orsay.lri.varna.views.
VueChemProbAnnotation
_vp
- Variable in class fr.orsay.lri.varna.views.
VueColorMapStyle
_vp
- Variable in class fr.orsay.lri.varna.views.
VueFont
_vp
- Variable in class fr.orsay.lri.varna.views.
VueGlobalRotation
_vp
- Variable in class fr.orsay.lri.varna.views.
VueHighlightRegionEdit
_vp
- Variable in class fr.orsay.lri.varna.views.
VueListeAnnotations
_vp
- Variable in class fr.orsay.lri.varna.views.
VueLoadColorMapValues
_vp
- Variable in class fr.orsay.lri.varna.views.
VueManualInput
_vp
- Variable in class fr.orsay.lri.varna.views.
VueMenu
_vp
- Variable in class fr.orsay.lri.varna.views.
VueNumPeriod
_vp
- Variable in class fr.orsay.lri.varna.views.
VueSpaceBetweenBases
_vp
- Variable in class fr.orsay.lri.varna.views.
VueStyleBP
_vp
- Variable in class fr.orsay.lri.varna.views.
VueUI
_vp
- Variable in class fr.orsay.lri.varna.views.
VueZoom
_vueBases
- Variable in class fr.orsay.lri.varna.components.
BaseSpecialColorEditor
_warning
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_xfigFilter
- Variable in class fr.orsay.lri.varna.views.
VueUI
_xmax
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_xmin
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_ymax
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_ymin
- Variable in class fr.orsay.lri.varna.models.export.
SecStrDrawingProducer
_zoom
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_zoom
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
_zoomAmount
- Variable in class fr.orsay.lri.varna.models.
VARNAConfig
_zoomAmount
- Variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
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