Uses of Class
fr.orsay.lri.varna.models.templates.RNATemplateDrawingAlgorithmException

Packages that use RNATemplateDrawingAlgorithmException
fr.orsay.lri.varna.models.rna   
fr.orsay.lri.varna.models.templates   
 

Uses of RNATemplateDrawingAlgorithmException in fr.orsay.lri.varna.models.rna
 

Methods in fr.orsay.lri.varna.models.rna that throw RNATemplateDrawingAlgorithmException
private  void RNA.computeBezierTangentVectorTarget(RNATemplate.RNATemplateElement.EdgeEndPoint endPoint, Point2D.Double curveEndPoint, Point2D.Double curveVectorOtherPoint)
          A cubic Bezier curve can be defined by 4 points, see http://en.wikipedia.org/wiki/Bezier_curve#Cubic_B.C3.A9zier_curves For each of the curve end points, there is the last/first point of the curve and a point which gives the direction and length of the tangent vector on that side.
 RNATemplateMapping RNA.drawRNATemplate(RNATemplate template)
          Same as below, with default helixLengthAdjustmentMethod.
 RNATemplateMapping RNA.drawRNATemplate(RNATemplate template, int helixLengthAdjustmentMethod)
          Draw this RNA like the given template.
 

Uses of RNATemplateDrawingAlgorithmException in fr.orsay.lri.varna.models.templates
 

Methods in fr.orsay.lri.varna.models.templates that throw RNATemplateDrawingAlgorithmException
static TreeAlignResult<RNANodeValue2,RNANodeValueTemplate> RNATemplateAlign.alignRNAWithTemplate(RNA rna, RNATemplate template)
          Align the given RNA with the given RNA template.
static RNATemplateMapping RNATemplateAlign.mapRNAWithTemplate(RNA rna, RNATemplate template)
          Map an RNA with an RNATemplate using tree alignment.