fr.orsay.lri.varna.models.rna
Class VARNASecDraw.PairedPortion
java.lang.Object
fr.orsay.lri.varna.models.rna.VARNASecDraw.Portion
fr.orsay.lri.varna.models.rna.VARNASecDraw.PairedPortion
- Enclosing class:
- VARNASecDraw
public class VARNASecDraw.PairedPortion
- extends VARNASecDraw.Portion
_pos1
int _pos1
_pos2
int _pos2
_len
int _len
_r
VARNASecDraw.RNATree _r
VARNASecDraw.PairedPortion
public VARNASecDraw.PairedPortion(int pos1,
int pos2,
int len,
VARNASecDraw.RNATree r)
getBaseList
public ArrayList<Integer> getBaseList()
- Specified by:
getBaseList
in class VARNASecDraw.Portion
toString
public String toString()
- Overrides:
toString
in class Object
getNumBases
public int getNumBases()
- Specified by:
getNumBases
in class VARNASecDraw.Portion
getLocalOutline
public GeneralPath getLocalOutline(RNA r)
getOutline
public GeneralPath getOutline(RNA r)
- Specified by:
getOutline
in class VARNASecDraw.Portion
getOutline
public GeneralPath getOutline(RNA r,
boolean local)