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B
BACKBONE_DISTANCE
- Variable in class fr.orsay.lri.varna.models.naView.
NAView
backboneColorOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
backgroundColorOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
backupAllCoords()
- Method in class fr.orsay.lri.varna.views.
VueUI
backupThicknesses()
- Method in class fr.orsay.lri.varna.views.
VueBPThickness
BASE
- Static variable in class fr.orsay.lri.varna.models.annotations.
TextAnnotation
if the annoted text is fixed to a base;
Base
- Class in
fr.orsay.lri.varna.models.naView
Base()
- Constructor for class fr.orsay.lri.varna.models.naView.
Base
BASE_INNER_COLOR_DEFAULT
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfig
BASE_NAME_COLOR_DEFAULT
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfig
BASE_NUMBER_COLOR_DEFAULT
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfig
BASE_OUTLINE_COLOR_DEFAULT
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfig
BASE_PAIR_DISTANCE
- Static variable in class fr.orsay.lri.varna.models.rna.
RNA
BASE_RADIUS
- Variable in class fr.orsay.lri.varna.models.rna.
RNA
baseColor
- Variable in class fr.orsay.lri.varna.components.
BaseTableModel
baseInnerColorOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
BaseList
- Class in
fr.orsay.lri.varna.models
BaseList(BaseList)
- Constructor for class fr.orsay.lri.varna.models.
BaseList
BaseList(String)
- Constructor for class fr.orsay.lri.varna.models.
BaseList
BaseList(String, ModeleBase)
- Constructor for class fr.orsay.lri.varna.models.
BaseList
baseNameColorOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
baseNumbersColorOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
baseOutlineColorOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
bases
- Variable in class fr.orsay.lri.varna.models.naView.
NAView
BaseSpecialColorEditor
- Class in
fr.orsay.lri.varna.components
BaseSpecialColorEditor(VueBases)
- Constructor for class fr.orsay.lri.varna.components.
BaseSpecialColorEditor
basesStyleOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
BaseTableModel
- Class in
fr.orsay.lri.varna.components
BaseTableModel(ArrayList<BaseList>)
- Constructor for class fr.orsay.lri.varna.components.
BaseTableModel
blueColorMap()
- Static method in class fr.orsay.lri.varna.models.rna.
ModeleColorMap
bondColorOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
borderHeightSlider
- Variable in class fr.orsay.lri.varna.views.
VueBorder
borderOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
borderWidthSlider
- Variable in class fr.orsay.lri.varna.views.
VueBorder
BOTH_RNA_COLOR
- Static variable in class fr.orsay.lri.varna.models.rna.
ModeleBasesComparison
boxPolice
- Variable in class fr.orsay.lri.varna.views.
VueFont
bpIncrementOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
bpStyleOpt
- Static variable in class fr.orsay.lri.varna.models.
VARNAConfigLoader
broken
- Variable in class fr.orsay.lri.varna.models.naView.
Connection
buf
- Variable in class fr.orsay.lri.varna.models.export.
XFIGExport
buildCaptionPosition(ModeleBase, double, VARNAConfig)
- Method in class fr.orsay.lri.varna.models.rna.
RNA
buildCaptionPosition(ModeleBase, double, double)
- Method in class fr.orsay.lri.varna.
VARNAPanel
buildPopupMenu()
- Method in class fr.orsay.lri.varna.views.
VueMenu
Builds the popup menu
buildTree(int, int, VARNASecDraw.RNATree, RNA)
- Method in class fr.orsay.lri.varna.models.rna.
VARNASecDraw
buildView()
- Method in class fr.orsay.lri.varna.views.
VueManualInput
buildViewFont()
- Method in class fr.orsay.lri.varna.views.
VueFont
buildViewVPTitle()
- Method in class fr.orsay.lri.varna.views.
VueFont
button
- Variable in class fr.orsay.lri.varna.components.
BaseSpecialColorEditor
BUTTONS
- Variable in class fr.orsay.lri.varna.components.
GradientEditorPanel
bwColorMap()
- Static method in class fr.orsay.lri.varna.models.rna.
ModeleColorMap
Overview
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