fr.orsay.lri.varna.models
Class VARNAConfig
java.lang.Object
fr.orsay.lri.varna.models.VARNAConfig
- All Implemented Interfaces:
- Serializable, Cloneable
public class VARNAConfig
- extends Object
- implements Serializable, Cloneable
- See Also:
- Serialized Form
serialVersionUID
private static final long serialVersionUID
- See Also:
- Constant Field Values
MAJOR_VERSION
public static final int MAJOR_VERSION
- See Also:
- Constant Field Values
MINOR_VERSION
public static final int MINOR_VERSION
- See Also:
- Constant Field Values
MAX_ZOOM
public static final double MAX_ZOOM
- Default values for config options
- See Also:
- Constant Field Values
MIN_ZOOM
public static final double MIN_ZOOM
- See Also:
- Constant Field Values
DEFAULT_ZOOM
public static final double DEFAULT_ZOOM
- See Also:
- Constant Field Values
MAX_AMOUNT
public static final double MAX_AMOUNT
- See Also:
- Constant Field Values
MIN_AMOUNT
public static final double MIN_AMOUNT
- See Also:
- Constant Field Values
DEFAULT_AMOUNT
public static final double DEFAULT_AMOUNT
- See Also:
- Constant Field Values
DEFAULT_BP_THICKNESS
public static final double DEFAULT_BP_THICKNESS
- See Also:
- Constant Field Values
DEFAULT_DIST_NUMBERS
public static final double DEFAULT_DIST_NUMBERS
- See Also:
- Constant Field Values
DEFAULT_PERIOD
public static final int DEFAULT_PERIOD
- See Also:
- Constant Field Values
DEFAULT_TITLE_COLOR
public static final Color DEFAULT_TITLE_COLOR
DEFAULT_BACKBONE_COLOR
public static final Color DEFAULT_BACKBONE_COLOR
DEFAULT_BOND_COLOR
public static final Color DEFAULT_BOND_COLOR
DEFAULT_SPECIAL_BASE_COLOR
public static final Color DEFAULT_SPECIAL_BASE_COLOR
DEFAULT_DASH_BASE_COLOR
public static final Color DEFAULT_DASH_BASE_COLOR
DEFAULT_BASE_OUTLINE_THICKNESS
public static final double DEFAULT_BASE_OUTLINE_THICKNESS
- See Also:
- Constant Field Values
BASE_OUTLINE_COLOR_DEFAULT
public static final Color BASE_OUTLINE_COLOR_DEFAULT
BASE_INNER_COLOR_DEFAULT
public static final Color BASE_INNER_COLOR_DEFAULT
BASE_NUMBER_COLOR_DEFAULT
public static final Color BASE_NUMBER_COLOR_DEFAULT
BASE_NAME_COLOR_DEFAULT
public static final Color BASE_NAME_COLOR_DEFAULT
DEFAULT_HOVER_COLOR
public static final Color DEFAULT_HOVER_COLOR
DEFAULT_BACKGROUND_COLOR
public static final Color DEFAULT_BACKGROUND_COLOR
DEFAULT_TITLE_FONT
public static final Font DEFAULT_TITLE_FONT
DEFAULT_BASE_FONT
public static final Font DEFAULT_BASE_FONT
DEFAULT_NUMBERS_FONT
public static final Font DEFAULT_NUMBERS_FONT
DEFAULT_BP_STYLE
public static final VARNAConfig.BP_STYLE DEFAULT_BP_STYLE
DEFAULT_COLOR_MAP
public static final ModeleColorMap DEFAULT_COLOR_MAP
DEFAULT_COLOR_MAP_OUTLINE
public static final Color DEFAULT_COLOR_MAP_OUTLINE
DEFAULT_BP_INCREMENT
public static final double DEFAULT_BP_INCREMENT
- See Also:
- Constant Field Values
DEFAULT_COLOR_MAP_WIDTH
public static double DEFAULT_COLOR_MAP_WIDTH
DEFAULT_COLOR_MAP_HEIGHT
public static double DEFAULT_COLOR_MAP_HEIGHT
DEFAULT_COLOR_MAP_X_OFFSET
public static double DEFAULT_COLOR_MAP_X_OFFSET
DEFAULT_COLOR_MAP_Y_OFFSET
public static double DEFAULT_COLOR_MAP_Y_OFFSET
DEFAULT_COLOR_MAP_STRIPE_WIDTH
public static int DEFAULT_COLOR_MAP_STRIPE_WIDTH
DEFAULT_COLOR_MAP_FONT_SIZE
public static int DEFAULT_COLOR_MAP_FONT_SIZE
DEFAULT_COLOR_MAP_FONT_COLOR
public static Color DEFAULT_COLOR_MAP_FONT_COLOR
_colorMapHeight
public double _colorMapHeight
- Various options.
_colorMapWidth
public double _colorMapWidth
_colorMapXOffset
public double _colorMapXOffset
_colorMapYOffset
public double _colorMapYOffset
_mainBPStyle
public VARNAConfig.BP_STYLE _mainBPStyle
_zoom
public double _zoom
_zoomAmount
public double _zoomAmount
_bpThickness
public double _bpThickness
_baseThickness
public double _baseThickness
_backboneColor
public Color _backboneColor
_drawBackbone
public boolean _drawBackbone
_hoverColor
public Color _hoverColor
_backgroundColor
public Color _backgroundColor
_drawBackground
public boolean _drawBackground
_bondColor
public Color _bondColor
_titleColor
public Color _titleColor
_specialBasesColor
public Color _specialBasesColor
_dashBasesColor
public Color _dashBasesColor
_titleFont
public Font _titleFont
_numbersFont
public Font _numbersFont
_fontBasesGeneral
public Font _fontBasesGeneral
_title
public String _title
_numPeriod
public int _numPeriod
_drawOutlineBase
public boolean _drawOutlineBase
_fillBase
public boolean _fillBase
_autoFit
public boolean _autoFit
_autoCenter
public boolean _autoCenter
_modifiable
public boolean _modifiable
_errorsOn
public boolean _errorsOn
_colorSpecialBases
public boolean _colorSpecialBases
_colorDashBases
public boolean _colorDashBases
_useBaseColorsForBPs
public boolean _useBaseColorsForBPs
_drawnNonCanonicalBP
public boolean _drawnNonCanonicalBP
_drawnNonPlanarBP
public boolean _drawnNonPlanarBP
_showWarnings
public boolean _showWarnings
_comparisonMode
public boolean _comparisonMode
_flatExteriorLoop
public boolean _flatExteriorLoop
_distNumbers
public double _distNumbers
_cm
public ModeleColorMap _cm
_colorMapCaption
public String _colorMapCaption
_drawColorMap
public boolean _drawColorMap
VARNAConfig
public VARNAConfig()
getFullName
public static String getFullName()
clone
public VARNAConfig clone()
- Overrides:
clone
in class Object