fr.orsay.lri.varna.models.templates
Class RNANodeValueTemplateBrokenBasePair
java.lang.Object
fr.orsay.lri.varna.models.templates.RNANodeValueTemplate
fr.orsay.lri.varna.models.templates.RNANodeValueTemplateBrokenBasePair
- All Implemented Interfaces:
- GraphvizDrawableNodeValue
public class RNANodeValueTemplateBrokenBasePair
- extends RNANodeValueTemplate
See RNANodeValueTemplate.
- Author:
- Raphael Champeimont
helix
private RNATemplate.RNATemplateHelix helix
- The original template element this node came from.
positionInHelix
private int positionInHelix
- The position (in the 5' to 3' order)
of this base in the original helix.
RNANodeValueTemplateBrokenBasePair
public RNANodeValueTemplateBrokenBasePair()
toGraphvizNodeName
public String toGraphvizNodeName()
- Description copied from interface:
GraphvizDrawableNodeValue
- Returns a string that will be displayed on the node by graphviz.
- Specified by:
toGraphvizNodeName
in interface GraphvizDrawableNodeValue
- Specified by:
toGraphvizNodeName
in class RNANodeValueTemplate
getHelix
public RNATemplate.RNATemplateHelix getHelix()
setHelix
public void setHelix(RNATemplate.RNATemplateHelix helix)
getPositionInHelix
public int getPositionInHelix()
setPositionInHelix
public void setPositionInHelix(int positionInHelix)