Methods in fr.orsay.lri.varna.models.rna with parameters of type VARNAConfig |
(package private) Point2D.Double |
RNA.buildCaptionPosition(ModeleBase mb,
double heightEstimate,
VARNAConfig conf)
|
private void |
RNA.drawBasePair(SecStrDrawingProducer out,
Point2D.Double orig,
Point2D.Double dest,
ModeleBP style,
VARNAConfig conf)
|
private void |
RNA.drawColorMap(VARNAConfig _conf,
SecStrDrawingProducer out)
|
void |
RNA.drawRNA(int mode,
VARNAConfig conf)
|
void |
RNA.drawRNA(VARNAConfig conf)
|
void |
RNA.drawRNARadiate(VARNAConfig conf)
|
Color |
RNA.getBaseInnerColor(int i,
VARNAConfig conf)
|
Color |
RNA.getBaseNameColor(int i,
VARNAConfig conf)
|
Color |
RNA.getBaseOuterColor(int i,
VARNAConfig conf)
|
Color |
RNA.getBasePairColor(ModeleBP bp,
VARNAConfig conf)
|
double |
RNA.getBasePairThickness(ModeleBP bp,
VARNAConfig conf)
|
private void |
RNA.renderAnnotations(SecStrDrawingProducer out,
double minX,
double minY,
VARNAConfig conf)
|
private void |
RNA.saveRNA(String path,
VARNAConfig conf,
double scale,
SecStrDrawingProducer out)
|
void |
RNA.saveRNAEPS(String path,
VARNAConfig conf)
|
void |
RNA.saveRNASVG(String path,
VARNAConfig conf)
|
void |
RNA.saveRNAXFIG(String path,
VARNAConfig conf)
|