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-rw-r--r-- | 3796 | Alignment.java | blob | history | raw |
-rw-r--r-- | 2114 | AlignmentMetadata.java | blob | history | raw |
-rw-r--r-- | 8281 | ClustalAlignmentUtil.java | blob | history | raw |
-rw-r--r-- | 2589 | ConservationMethod.java | blob | history | raw |
-rw-r--r-- | 86 | DisorderMethod.java | blob | history | raw |
-rw-r--r-- | 5767 | FastaReader.java | blob | history | raw |
-rw-r--r-- | 4885 | FastaSequence.java | blob | history | raw |
-rw-r--r-- | 1156 | Program.java | blob | history | raw |
-rw-r--r-- | 1299 | Range.java | blob | history | raw |
-rw-r--r-- | 1134 | SMERFSConstraints.java | blob | history | raw |
-rw-r--r-- | 5601 | Score.java | blob | history | raw |
-rw-r--r-- | 5419 | ScoreManager.java | blob | history | raw |
-rw-r--r-- | 26036 | SequenceUtil.java | blob | history | raw |
-rw-r--r-- | 1521 | UnknownFileFormatException.java | blob | history | raw |
-rw-r--r-- | 400 | package-info.java | blob | history | raw |