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-rw-r--r-- | 3796 | Alignment.java | blob | history | raw |
-rw-r--r-- | 2114 | AlignmentMetadata.java | blob | history | raw |
-rw-r--r-- | 8275 | ClustalAlignmentUtil.java | blob | history | raw |
-rw-r--r-- | 2618 | ConservationMethod.java | blob | history | raw |
-rw-r--r-- | 902 | DisorderMethod.java | blob | history | raw |
-rw-r--r-- | 6514 | FastaReader.java | blob | history | raw |
-rw-r--r-- | 4920 | FastaSequence.java | blob | history | raw |
-rw-r--r-- | 1161 | Program.java | blob | history | raw |
-rw-r--r-- | 10475 | RNAStructReader.java | blob | history | raw |
-rw-r--r-- | 4041 | RNAStructScoreManager.java | blob | history | raw |
-rw-r--r-- | 2625 | Range.java | blob | history | raw |
-rw-r--r-- | 1950 | SMERFSConstraints.java | blob | history | raw |
-rw-r--r-- | 7924 | Score.java | blob | history | raw |
-rw-r--r-- | 6536 | ScoreManager.java | blob | history | raw |
-rw-r--r-- | 25863 | SequenceUtil.java | blob | history | raw |
-rw-r--r-- | 1521 | UnknownFileFormatException.java | blob | history | raw |
-rw-r--r-- | 400 | package-info.java | blob | history | raw |