# Convention for properties. Read from gradle.properties, use lower_case_underlines for property names. # For properties set within build.gradle, use camelCaseNoSpace. # jalviewDir = . #JAVA_VERSION = 1.8 JAVA_VERSION = 11 source_dir = src #source_dir = utils/jalviewjs/test/src test_source_dir = test #test_source_dir = utils/jalviewjs/test/test # JALVIEW_VERSION now being set by logic in build.gradle defaulting to looking at jalview.version property in RELEASE file #JALVIEW_VERSION = DEVELOPMENT INSTALLATION = Source jalview_keystore = keys/.keystore jalview_keystore.pass = alignmentisfun jalview_key = jalview jalview_key.pass = alignmentisfun jalview_tsaurl = proxyPort = 80 proxyHost = sqid jalview_keyalg = SHA1withRSA jalview_keydig = SHA1 testng_groups = Functional testng_excluded_groups = j8libDir = j8lib j11libDir = j11lib resource_dir = resources help_parent_dir = help help_dir = help doc_dir = doc classes_dir = classes clover = false clover_classes_dir = clover-classes clover_sources_instr_dir = clover-instr clover_report_dir = clover-report clover_lib_dir = utils/clover/lib cloverreport_mem = 2g cloverreport_jvmargs = -Dfile.encoding=UTF-8 cloverreport_html_options = cloverreport_xml_options = package_dir = dist ARCHIVEDIR = test_output_dir = tests utils_dir = utils build_properties_file = .build_properties application_codebase = *.jalview.org main_class = jalview.bin.Jalview shadow_jar_main_class = jalview.bin.Launcher jalview_name = Jalview getdown_local = false getdown_website_dir = getdown/website getdown_resource_dir = resource getdown_files_dir = getdown/files getdown_lib_dir = getdown/lib getdown_launcher = getdown-launcher.jar getdown_launcher_local = getdown-launcher-local.jar getdown_launcher_new = getdown-launcher-new.jar getdown_core = getdown/lib/getdown-core.jar getdown_build_properties = build_properties getdown_launch_jvl_name = channel_launch getdown_images_dir = utils/getdown getdown_background_image = jalview_logo_background_getdown-640x480.png getdown_instant_background_image = jalview_logo_background_getdown_instant-640x480.png getdown_error_background = jalview_logo_background_getdown_error-640x480.png getdown_progress_image = jalview_logo_background_getdown-progress.png getdown_mac_dock_icon = jalview_logo.icns getdown_icon = Jalview-Logo.png getdown_txt_allow_offline = true getdown_txt_max_concurrent_downloads = 10 # now got better (dynamic) defaults when jvmmem* not set #getdown_txt_jalview.jvmmempc = 90 #getdown_txt_jalview.jvmmemmax = 32G getdown_txt_multi_jvmarg = -Dgetdownappdir=%APPDIR% getdown_txt_strict_comments = true getdown_txt_ui.progress_sync_before_shown = true getdown_txt_ui.progress_sync_after_shown = false getdown_txt_ui.keep_on_top = true getdown_txt_ui.display_appbase = true getdown_txt_ui.display_version = true getdown_txt_ui.min_show_seconds = 8 getdown_txt_ui.background = FFFFFF getdown_txt_ui.progress = 20, 440, 600, 22 getdown_txt_ui.progress_bar = AAAAFF getdown_txt_ui.progress_text = 000000 getdown_txt_ui.status = 20, 380, 600, 58 getdown_txt_ui.status_text = 000066 getdown_txt_ui.install_error = https://www.jalview.org/faq/getdownerror getdown_alt_java8_min_version = 01080000 getdown_alt_java8_max_version = 01089999 getdown_alt_java11_min_version = 11000000 getdown_alt_java11_max_version = #getdown_alt_java11_txt_multi_java_location = [windows-amd64] /getdown/jre/jre-11-windows-x64.zip,[linux-amd64] /getdown/jre/jre-11-linux-x64.zip,[mac os x] /getdown/jre/jre-11-mac-x64.zip #getdown_alt_java8_txt_multi_java_location = [windows-amd64] /getdown/jre/jre-8-windows-x64.zip,[linux-amd64] /getdown/jre/jre-8-linux-x64.zip,[mac os x] /getdown/jre/jre-8-mac-x64.zip jre_installs_dir = ~/buildtools/jre j8libDir = j8lib j11libDir = j11lib j11modDir = j11mod j11modules = com.sun.istack.runtime,com.sun.xml.bind,com.sun.xml.fastinfoset,com.sun.xml.streambuffer,com.sun.xml.txw2,com.sun.xml.ws.policy,java.activation,java.annotation,java.base,java.compiler,java.datatransfer,java.desktop,java.logging,java.management,java.management.rmi,java.naming,java.prefs,java.rmi,java.scripting,java.security.sasl,java.sql,java.xml,java.xml.bind,java.xml.soap,java.xml.ws,javax.jws,jdk.httpserver,jdk.jsobject,jdk.unsupported,jdk.xml.dom,org.jvnet.mimepull,org.jvnet.staxex,javax.servlet.api,java.ws.rs flexmark_css = utils/doc/github.css channel_properties_dir = utils/channels channel_props = channel.props install4j_home_dir = ~/buildtools/install4j9 install4j_copyright_message = ... install4j_bundle_id = org.jalview.jalview-desktop install4j_utils_dir = utils/install4j install4j_images_dir = utils/install4j install4j_template = install4j9_template.install4j install4j_info_plist_file_associations = file_associations_auto-Info_plist.xml install4j_installer_file_associations = file_associations_auto-install4j8.xml #install4j_DMG_uninstaller_app_files = uninstall_old_jalview_files.xml install4j_build_dir = build/install4j install4j_executable_name = jalviewg install4j_media_types = windows,macosArchive,unixArchive,unixInstaller install4j_faster = false install4j_application_categories = Science;Biology;Java; install4j_release_win_application_id = 6595-2347-1923-0725 install4j_mac_icons_file = jalview_logo.icns install4j_windows_icons_file = jalview_logo.ico install4j_png_icon_file = jalview_logo.png install4j_background = jalview_logo_background_fade-640x480.png install4j_dmg_background = jalview_dmg_background-NON-RELEASE.png install4j_dmg_ds_store = jalview_dmg_DS_Store getdown_wrapper_script_dir = bin getdown_bash_wrapper_script = jalview.sh getdown_powershell_wrapper_script = jalview.ps1 getdown_batch_wrapper_script = jalview.bat OSX_KEYSTORE = OSX_KEYPASS = JSIGN_SH = echo OSX_APPLEID = OSX_ALTOOLPASS = CHANNEL=LOCAL getdown_channel_base = https://www.jalview.org/getdown getdown_app_dir_release = release getdown_app_dir_alt = alt getdown_app_dir_java = jre getdown_install_dir = install getdown_rsync_dest = /Volumes/jalview/docroot/getdown reportRsyncCommand = RUNRSYNC=false bamboo_channelbase = https://builds.jalview.org/browse bamboo_planKey = bamboo_getdown_channel_suffix = /latest/artifact/shared/getdown-channel eclipse_codestyle_file = utils/eclipse/JalviewCodeStyle.xml eclipse_extra_jdt_prefs_file = utils/eclipse/org.eclipse.jdt.core.jalview.prefs eclipse_project_name = jalview eclipse_bin_dir = bin eclipse_debug = false ## IMPORTANT for headless build # to enable `gradle jalviewjs` headless build you MUST set # j2s.config.altfileproperty = org.jalview.jalviewjsj2sfilename # (or set to whatever value jalviewjs_j2s_alt_file_property is set to) # in your ./.j2s file # OR run the task `gradle jalviewjsEnableAltFileProperty` to do that for you (before headless build task) jalviewjs_j2s_alt_file_property = org.jalview.jalviewjsj2sfilename jalviewjs_j2s_alt_settings = build/jalviewjs/config/j2s # these are used for actual .j2s file to pass on to alt j2s file jalviewjs_j2s_settings = .j2s jalviewjs_j2s_alt_file_property_config = j2s.config.altfileproperty # for developing in Eclipse as IDE, set this to automatically copy current swingjs/net.sf.j2s.core.jar to your dropins dir jalviewjs_eclipseIDE_auto_copy_j2s_plugin = false # Override this in a local.properties file jalviewjs_eclipse_root = ~/buildtools/eclipse/jee-2019-09 jalviewjs_eclipse_dropins_dir = utils/jalviewjs/eclipse/dropins jalviewjs_swingjs_zip = swingjs/SwingJS-site.zip jalviewjs_j2s_plugin = swingjs/net.sf.j2s.core-j11.jar jalviewjs_libjs_dir = utils/jalviewjs/libjs jalviewjs_site_resource_dir = utils/jalviewjs/site-resources jalviewjs_classlists_dir = utils/jalviewjs/classlists jalviewjs_classlist_jalview = utils/jalviewjs/_j2sclasslist.txt #jalviewjs_eclipse_workspace = ~/tmp/eclipse-workspace # these 3 files/dirs found in build/jalviewjs jalviewjs_eclipse_tmp_dropins_dir = eclipse_dropins jalviewjs_eclipse_workspace_location_file = eclipse_workspace_location jalviewjs_site_dir = site # these dirs are subdirs of the site dir jalviewjs_swingjs_subdir = swingjs jalviewjs_j2s_subdir = swingjs/j2s jalviewjs_js_subdir = swingjs/js #jalviewjs_eclipseBuildArg = build jalviewjs_eclipse_build_arg = cleanBuild jalviewjs_server_port = 9001 jalviewjs_server_wait = 30 jalviewjs_server_resource = /jalview_bin_Jalview.html jalviewjs_core_name = _jalview jalviewjs_name = JalviewJS jalviewjs_core_key = core #jalviewjs_core_key = preloadCore jalviewjs_ignore_transpile_errors = true j2s.compiler.status = enable #j2s.site.directory = null ## site defined from buildDir+'/jalviewjs/'+jalviewjs_site_dir #j2s.log.methods.declared = j2s_methods_declared.log #j2s.log.methods.called = j2s_methods_called.log #a semicolon-separated list of package-level file paths to be excluded j2s.excluded.paths = test;testng;util #j2s.include.tests = true #j2s.testing = null #j2s.compiler.nonqualified.packages = null #j2s.compiler.nonqualified.classes = null #j2s.compiler.mode = debug #a semicolon-separated list of package (foo.) or class (foo.bar) replacements to be made #j2s.class.replacements = org.apache.logging.log4j.->jalview.javascript.log4j. j2s.template.html = utils/jalviewjs/template.html j2s_coretemplate_html = utils/jalviewjs/coretemplate.html #output file name for logging methods declared - delete the file to regenerate a listing #j2s.prop.j2s.log.methods.declared=swingjs/methodsDeclared_csv #output file name for logging methods called - delete the file to regenerate a listing #j2s.prop.j2s.log.methods_called=swingjs/methodsCalled_csv #if set, every instance of methods called will be logged #otherwise, only the first call to a method will be logged #output will be comma-separated: called method,caller class #j2s.prop.j2s.log.all.calls=true jalviewjs_j2s_transpile_stdout = j2s-transpile.out #jalviewjs_j2s_stderr = j2s-transpile.err # all going into out jalviewjs_j2s_to_console = true jalviewjs_closure_compiler = tools/closure_compiler.jar jalviewjs_j2s_closure_stdout = j2s-closure.out testp=gradle.properties