/* * This class was automatically generated with * Castor 1.1, using an XML * Schema. * $Id$ */ package jalview.schemabinding.version2; //---------------------------------/ //- Imported classes and packages -/ //---------------------------------/ import org.exolab.castor.xml.Marshaller; import org.exolab.castor.xml.Unmarshaller; /** * Class Pdbentry. * * @version $Revision$ $Date$ */ public class Pdbentry implements java.io.Serializable { //--------------------------/ //- Class/Member Variables -/ //--------------------------/ /** * Field _id. */ private java.lang.String _id; /** * Field _type. */ private java.lang.String _type; /** * Field _file. */ private java.lang.String _file; /** * Field _items. */ private java.util.Vector _items; //----------------/ //- Constructors -/ //----------------/ public Pdbentry() { super(); this._items = new java.util.Vector(); } //-----------/ //- Methods -/ //-----------/ /** * * * @param vPdbentryItem * @throws java.lang.IndexOutOfBoundsException if the index * given is outside the bounds of the collection */ public void addPdbentryItem( final jalview.schemabinding.version2.PdbentryItem vPdbentryItem) throws java.lang.IndexOutOfBoundsException { this._items.addElement(vPdbentryItem); } /** * * * @param index * @param vPdbentryItem * @throws java.lang.IndexOutOfBoundsException if the index * given is outside the bounds of the collection */ public void addPdbentryItem( final int index, final jalview.schemabinding.version2.PdbentryItem vPdbentryItem) throws java.lang.IndexOutOfBoundsException { this._items.add(index, vPdbentryItem); } /** * Method enumeratePdbentryItem. * * @return an Enumeration over all * jalview.schemabinding.version2.PdbentryItem elements */ public java.util.Enumeration enumeratePdbentryItem( ) { return this._items.elements(); } /** * Returns the value of field 'file'. * * @return the value of field 'File'. */ public java.lang.String getFile( ) { return this._file; } /** * Returns the value of field 'id'. * * @return the value of field 'Id'. */ public java.lang.String getId( ) { return this._id; } /** * Method getPdbentryItem. * * @param index * @throws java.lang.IndexOutOfBoundsException if the index * given is outside the bounds of the collection * @return the value of the * jalview.schemabinding.version2.PdbentryItem at the given inde */ public jalview.schemabinding.version2.PdbentryItem getPdbentryItem( final int index) throws java.lang.IndexOutOfBoundsException { // check bounds for index if (index < 0 || index >= this._items.size()) { throw new IndexOutOfBoundsException("getPdbentryItem: Index value '" + index + "' not in range [0.." + (this._items.size() - 1) + "]"); } return (jalview.schemabinding.version2.PdbentryItem) _items.get(index); } /** * Method getPdbentryItem.Returns the contents of the * collection in an Array.

Note: Just in case the * collection contents are changing in another thread, we pass * a 0-length Array of the correct type into the API call. * This way we know that the Array returned is of * exactly the correct length. * * @return this collection as an Array */ public jalview.schemabinding.version2.PdbentryItem[] getPdbentryItem( ) { jalview.schemabinding.version2.PdbentryItem[] array = new jalview.schemabinding.version2.PdbentryItem[0]; return (jalview.schemabinding.version2.PdbentryItem[]) this._items.toArray(array); } /** * Method getPdbentryItemCount. * * @return the size of this collection */ public int getPdbentryItemCount( ) { return this._items.size(); } /** * Returns the value of field 'type'. * * @return the value of field 'Type'. */ public java.lang.String getType( ) { return this._type; } /** * Method isValid. * * @return true if this object is valid according to the schema */ public boolean isValid( ) { try { validate(); } catch (org.exolab.castor.xml.ValidationException vex) { return false; } return true; } /** * * * @param out * @throws org.exolab.castor.xml.MarshalException if object is * null or if any SAXException is thrown during marshaling * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema */ public void marshal( final java.io.Writer out) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, out); } /** * * * @param handler * @throws java.io.IOException if an IOException occurs during * marshaling * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema * @throws org.exolab.castor.xml.MarshalException if object is * null or if any SAXException is thrown during marshaling */ public void marshal( final org.xml.sax.ContentHandler handler) throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, handler); } /** */ public void removeAllPdbentryItem( ) { this._items.clear(); } /** * Method removePdbentryItem. * * @param vPdbentryItem * @return true if the object was removed from the collection. */ public boolean removePdbentryItem( final jalview.schemabinding.version2.PdbentryItem vPdbentryItem) { boolean removed = _items.remove(vPdbentryItem); return removed; } /** * Method removePdbentryItemAt. * * @param index * @return the element removed from the collection */ public jalview.schemabinding.version2.PdbentryItem removePdbentryItemAt( final int index) { java.lang.Object obj = this._items.remove(index); return (jalview.schemabinding.version2.PdbentryItem) obj; } /** * Sets the value of field 'file'. * * @param file the value of field 'file'. */ public void setFile( final java.lang.String file) { this._file = file; } /** * Sets the value of field 'id'. * * @param id the value of field 'id'. */ public void setId( final java.lang.String id) { this._id = id; } /** * * * @param index * @param vPdbentryItem * @throws java.lang.IndexOutOfBoundsException if the index * given is outside the bounds of the collection */ public void setPdbentryItem( final int index, final jalview.schemabinding.version2.PdbentryItem vPdbentryItem) throws java.lang.IndexOutOfBoundsException { // check bounds for index if (index < 0 || index >= this._items.size()) { throw new IndexOutOfBoundsException("setPdbentryItem: Index value '" + index + "' not in range [0.." + (this._items.size() - 1) + "]"); } this._items.set(index, vPdbentryItem); } /** * * * @param vPdbentryItemArray */ public void setPdbentryItem( final jalview.schemabinding.version2.PdbentryItem[] vPdbentryItemArray) { //-- copy array _items.clear(); for (int i = 0; i < vPdbentryItemArray.length; i++) { this._items.add(vPdbentryItemArray[i]); } } /** * Sets the value of field 'type'. * * @param type the value of field 'type'. */ public void setType( final java.lang.String type) { this._type = type; } /** * Method unmarshal. * * @param reader * @throws org.exolab.castor.xml.MarshalException if object is * null or if any SAXException is thrown during marshaling * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema * @return the unmarshaled * jalview.schemabinding.version2.Pdbentry */ public static jalview.schemabinding.version2.Pdbentry unmarshal( final java.io.Reader reader) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { return (jalview.schemabinding.version2.Pdbentry) Unmarshaller.unmarshal(jalview.schemabinding.version2.Pdbentry.class, reader); } /** * * * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema */ public void validate( ) throws org.exolab.castor.xml.ValidationException { org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); validator.validate(this); } }