/*
 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
 * Copyright (C) 2015 The Jalview Authors
 * 
 * This file is part of Jalview.
 * 
 * Jalview is free software: you can redistribute it and/or
 * modify it under the terms of the GNU General Public License 
 * as published by the Free Software Foundation, either version 3
 * of the License, or (at your option) any later version.
 *  
 * Jalview is distributed in the hope that it will be useful, but 
 * WITHOUT ANY WARRANTY; without even the implied warranty 
 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
 * PURPOSE.  See the GNU General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License
 * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
 * The Jalview Authors are detailed in the 'AUTHORS' file.
 */
package uk.ac.ebi.www.picr.AccessionMappingService;

public interface AccessionMapperInterface extends java.rmi.Remote
{
  public uk.ac.ebi.picr.model.UPEntry getUPIForSequence(
          java.lang.String sequence, java.lang.String[] searchDatabases,
          java.lang.String taxonId, boolean onlyActive)
          throws java.rmi.RemoteException;

  public uk.ac.ebi.picr.model.UPEntry[] getUPIForAccession(
          java.lang.String accession, java.lang.String ac_version,
          java.lang.String[] searchDatabases, java.lang.String taxonId,
          boolean onlyActive) throws java.rmi.RemoteException;

  public java.lang.String[] getMappedDatabaseNames()
          throws java.rmi.RemoteException;
}