/* * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.datamodel; import static org.testng.AssertJUnit.assertEquals; import static org.testng.AssertJUnit.assertFalse; import static org.testng.AssertJUnit.assertTrue; import jalview.gui.JvOptionPane; import org.testng.annotations.BeforeClass; import org.testng.annotations.Test; public class MatchTest { @BeforeClass(alwaysRun = true) public void setUpJvOptionPane() { JvOptionPane.setInteractiveMode(false); JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION); } @Test(groups = { "Functional" }) public void testToString() { SequenceI seq = new Sequence("Seq1", "abcdefghijklm"); SearchResultMatchI m = new SearchResults().new Match(seq, 3, 5); assertEquals("Seq1/3-5", m.toString()); } @Test(groups = { "Functional" }) public void testEquals() { SequenceI seq1 = new Sequence("", "abcdefghijklm"); SequenceI seq2 = new Sequence("", "abcdefghijklm"); SearchResultsI sr1 = new SearchResults(); SearchResultsI sr2 = new SearchResults(); assertFalse(sr1.equals(null)); assertFalse(sr1.equals(seq1)); assertTrue(sr1.equals(sr1)); assertTrue(sr1.equals(sr2)); assertTrue(sr2.equals(sr1)); sr1.addResult(seq1, 1, 1); assertFalse(sr1.equals(sr2)); assertFalse(sr2.equals(sr1)); sr2.addResult(seq1, 1, 1); assertTrue(sr1.equals(sr2)); assertTrue(sr2.equals(sr1)); /* * same match but on different sequences - not equal */ SearchResultsI sr3 = new SearchResults(); sr3.addResult(seq2, 1, 1); assertFalse(sr1.equals(sr3)); assertFalse(sr3.equals(sr1)); /* * same sequence but different end position - not equal */ sr1.addResult(seq1, 3, 4); sr2.addResult(seq1, 3, 5); assertFalse(sr1.equals(sr2)); /* * same sequence but different start position - not equal */ sr1 = new SearchResults(); sr2 = new SearchResults(); sr1.addResult(seq1, 3, 4); sr2.addResult(seq1, 2, 4); assertFalse(sr1.equals(sr2)); } }