X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fseqmappings.html;h=1b078d0651a8062a88ce4058325198cd553961f5;hp=b34e1b8e559e0277dcea62aabecb181f7e334288;hb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;hpb=865a855a4ca87eadb3e5ff284ed32ed307d9c34b diff --git a/help/html/features/seqmappings.html b/help/html/features/seqmappings.html index b34e1b8..1b078d0 100644 --- a/help/html/features/seqmappings.html +++ b/help/html/features/seqmappings.html @@ -1,40 +1,46 @@ + --> Mapping Between Different Sequences -

Mapping Between Different Sequences

-

A new feature in Jalview 2.3 is the ability to map between sequences in different - domains, based on alignment, or by the use of explicit mappings provided by - databases.

-

The most familiar mapping is the one used to identify -the coordinates corresponding to a displayed sequence when -viewing a PDB file associated with a sequence (see -"Viewing PDB Files" -for more information.

-

The newest form of mapping supported by Jalview is the -correspondence between DNA and protein sequences. This mapping -can be imported directly from EMBL and EMBLCDS database records -retrieved by the Sequence Fetcher, -and allows sequence features to be mapped directly from Uniprot -das sources to their coding region on EMBL sequence records. +

+ Mapping Between Different Sequences +

+

A new feature in Jalview 2.3 is the ability to map between + sequences in different domains, based on alignment, or by the use of + explicit mappings provided by databases.

+

+ The most familiar mapping is the one used to identify the + coordinates corresponding to a displayed sequence when viewing a PDB + file associated with a sequence (see "Viewing + PDB Files" for more information. +

+

+ The newest form of mapping supported by Jalview is the + correspondence between DNA and protein sequences. This mapping can + be imported directly from EMBL and EMBLCDS database records + retrieved by the Sequence Fetcher, and + allows sequence features to be mapped directly from Uniprot das + sources to their coding region on EMBL sequence records.