X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAlignFrame.java;fp=src%2Fjalview%2Fgui%2FAlignFrame.java;h=bac06e9268598862cddacd96b50026f61ec60494;hp=4fa840858477186647d2338223c3ab48555273a3;hb=4435c731351c802772dd1355fdb5747cfacd7838;hpb=2d241446c80365862d31e76f2ecccaab33a1547f

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index 4fa8408..bac06e9 100644
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -4525,6 +4525,7 @@ public class AlignFrame extends GAlignFrame
     {
       viewport.setShowSequenceFeatures(true);
       showSeqFeatures.setSelected(true);
+      alignPanel.getAlignment().resetColors();
     }
 
   }