X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FRedundancyPanel.java;h=6ed32482a30246fdbd7f2586c0efa48eac1b676b;hp=c4390c042d507c2a143db23fb5c64ec571b8cfbb;hb=86a9434feba170f5a91b0eb366d152262cc65ff8;hpb=8b56642ad01b7d0c99c74160600eabb803ed6485

diff --git a/src/jalview/gui/RedundancyPanel.java b/src/jalview/gui/RedundancyPanel.java
index c4390c0..6ed3248 100755
--- a/src/jalview/gui/RedundancyPanel.java
+++ b/src/jalview/gui/RedundancyPanel.java
@@ -104,7 +104,7 @@ public class RedundancyPanel extends GSliderPanel implements Runnable
     Desktop.addInternalFrame(frame,
             MessageManager
                     .getString("label.redundancy_threshold_selection"),
-            400, 100, false);
+            true, FRAME_WIDTH, FRAME_HEIGHT, false, true);
     frame.addInternalFrameListener(new InternalFrameAdapter()
     {
       @Override
@@ -214,7 +214,7 @@ public class RedundancyPanel extends GSliderPanel implements Runnable
   @Override
   public void applyButton_actionPerformed(ActionEvent e)
   {
-    Vector del = new Vector();
+    List<SequenceI> del = new ArrayList<>();
 
     undoButton.setEnabled(true);
 
@@ -225,13 +225,12 @@ public class RedundancyPanel extends GSliderPanel implements Runnable
     {
       if (value <= redundancy[i])
       {
-        del.addElement(originalSequences[i]);
+        del.add(originalSequences[i]);
       }
     }
 
     // This has to be done before the restoreHistoryItem method of alignFrame
-    // will
-    // actually restore these sequences.
+    // will actually restore these sequences.
     if (del.size() > 0)
     {
       SequenceI[] deleted = new SequenceI[del.size()];
@@ -239,7 +238,7 @@ public class RedundancyPanel extends GSliderPanel implements Runnable
       int width = 0;
       for (int i = 0; i < del.size(); i++)
       {
-        deleted[i] = (SequenceI) del.elementAt(i);
+        deleted[i] = del.get(i);
         if (deleted[i].getLength() > width)
         {
           width = deleted[i].getLength();