X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=src%2Fjalview%2Fjbgui%2FGDesktop.java;h=e0467836f8f1caabc00ee1083b84178bed131214;hp=2ea3774578ab0ee4cf653ab19d92c4cf7d73eab9;hb=68c8a239acd5ff30ef4d8f00dfd9d15bf4923b6b;hpb=8fa69554edf6aeb278b4a4afd8e2b60264fdccd8

diff --git a/src/jalview/jbgui/GDesktop.java b/src/jalview/jbgui/GDesktop.java
index 2ea3774..e046783 100755
--- a/src/jalview/jbgui/GDesktop.java
+++ b/src/jalview/jbgui/GDesktop.java
@@ -20,13 +20,7 @@
  */
 package jalview.jbgui;
 
-import jalview.api.AlignmentViewPanel;
-import jalview.io.FileFormatException;
-import jalview.util.MessageManager;
-import jalview.util.Platform;
-
 import java.awt.FlowLayout;
-import java.awt.Toolkit;
 import java.awt.event.ActionEvent;
 import java.awt.event.ActionListener;
 
@@ -36,6 +30,12 @@ import javax.swing.JMenu;
 import javax.swing.JMenuBar;
 import javax.swing.JMenuItem;
 
+import jalview.api.AlignmentViewPanel;
+import jalview.bin.Cache;
+import jalview.io.FileFormatException;
+import jalview.util.MessageManager;
+import jalview.util.Platform;
+
 /**
  * DOCUMENT ME!
  * 
@@ -54,10 +54,6 @@ public class GDesktop extends JFrame
 
   JMenu HelpMenu = new JMenu();
 
-  protected JMenu VamsasMenu = new JMenu();
-
-  protected JMenu VamsasStMenu = new JMenu();
-
   JMenuItem inputLocalFileMenuItem = new JMenuItem();
 
   JMenuItem inputURLMenuItem = new JMenuItem();
@@ -84,16 +80,8 @@ public class GDesktop extends JFrame
 
   JMenu inputMenu = new JMenu();
 
-  protected JMenuItem vamsasStart = new JMenuItem();
-
-  protected JMenuItem vamsasImport = new JMenuItem();
-
-  protected JMenuItem vamsasSave = new JMenuItem();
-
   JMenuItem inputSequence = new JMenuItem();
 
-  protected JMenuItem vamsasStop = new JMenuItem();
-
   JMenuItem closeAll = new JMenuItem();
 
   JMenuItem raiseRelated = new JMenuItem();
@@ -129,13 +117,12 @@ public class GDesktop extends JFrame
       e.printStackTrace();
     }
 
-    if (Platform.allowMnemonics()) 
+    if (Platform.allowMnemonics())
     {
-    	//BH was !Platform.isAMacAndNotJS()) i.e. "JS or not Mac"
-    	// but here we want just not a Mac, period, right?
+      // BH was !Platform.isAMacAndNotJS()) i.e. "JS or not Mac"
+      // but here we want just not a Mac, period, right?
       FileMenu.setMnemonic('F');
       inputLocalFileMenuItem.setMnemonic('L');
-      VamsasMenu.setMnemonic('V'); 
       inputURLMenuItem.setMnemonic('U');
       inputTextboxMenuItem.setMnemonic('C');
       quit.setMnemonic('Q');
@@ -153,21 +140,37 @@ public class GDesktop extends JFrame
    */
   private void jbInit() throws Exception
   {
+    /**
+     * APQHandlers sets handlers for About, Preferences and Quit actions
+     * peculiar to macOS's application menu. APQHandlers will check to see if a
+     * handler is supported before setting it.
+     */
+    try
+    {
+      APQHandlers.setAPQHandlers(this);
+    } catch (Exception e)
+    {
+      System.out.println("Cannot set APQHandlers");
+      // e.printStackTrace();
+    } catch (Throwable t)
+    {
+      jalview.bin.Console
+              .warn("Error setting APQHandlers: " + t.toString());
+      jalview.bin.Console.trace(Cache.getStackTraceString(t));
+    }
+
     setName("jalview-desktop");
     FileMenu.setText(MessageManager.getString("action.file"));
     HelpMenu.setText(MessageManager.getString("action.help"));
-    VamsasMenu.setText("Vamsas");
-    VamsasMenu.setToolTipText(MessageManager
-            .getString("label.share_data_vamsas_applications"));
-    VamsasStMenu.setText(MessageManager.getString("label.connect_to"));
-    VamsasStMenu.setToolTipText(
-            MessageManager.getString("label.join_existing_vamsas_session"));
     inputLocalFileMenuItem
             .setText(MessageManager.getString("label.load_tree_from_file"));
-    inputLocalFileMenuItem.setAccelerator(
-            javax.swing.KeyStroke.getKeyStroke(java.awt.event.KeyEvent.VK_O,
-                    Toolkit.getDefaultToolkit().getMenuShortcutKeyMask(),
-                    false));
+    inputLocalFileMenuItem
+            .setAccelerator(
+                    javax.swing.KeyStroke
+                            .getKeyStroke(java.awt.event.KeyEvent.VK_O,
+                                    jalview.util.ShortcutKeyMaskExWrapper
+                                            .getMenuShortcutKeyMaskEx(),
+                                    false));
     inputLocalFileMenuItem
             .addActionListener(new java.awt.event.ActionListener()
             {
@@ -274,39 +277,6 @@ public class GDesktop extends JFrame
       }
     });
     inputMenu.setText(MessageManager.getString("label.input_alignment"));
-    vamsasStart
-            .setText(MessageManager.getString("label.new_vamsas_session"));
-    vamsasStart.setVisible(false);
-    vamsasStart.addActionListener(new ActionListener()
-    {
-      @Override
-      public void actionPerformed(ActionEvent e)
-      {
-        vamsasStart_actionPerformed(e);
-      }
-    });
-    vamsasImport.setText(
-            MessageManager.getString("action.load_vamsas_session"));
-    vamsasImport.setVisible(false);
-    vamsasImport.addActionListener(new ActionListener()
-    {
-      @Override
-      public void actionPerformed(ActionEvent e)
-      {
-        vamsasImport_actionPerformed(e);
-      }
-    });
-    vamsasSave.setText(
-            MessageManager.getString("action.save_vamsas_session"));
-    vamsasSave.setVisible(false);
-    vamsasSave.addActionListener(new ActionListener()
-    {
-      @Override
-      public void actionPerformed(ActionEvent e)
-      {
-        vamsasSave_actionPerformed(e);
-      }
-    });
     inputSequence
             .setText(MessageManager.getString("action.fetch_sequences"));
     inputSequence.addActionListener(new ActionListener()
@@ -317,17 +287,6 @@ public class GDesktop extends JFrame
         inputSequence_actionPerformed(e);
       }
     });
-    vamsasStop
-            .setText(MessageManager.getString("label.stop_vamsas_session"));
-    vamsasStop.setVisible(false);
-    vamsasStop.addActionListener(new ActionListener()
-    {
-      @Override
-      public void actionPerformed(ActionEvent e)
-      {
-        vamsasStop_actionPerformed(e);
-      }
-    });
     closeAll.setText(MessageManager.getString("action.close_all"));
     closeAll.addActionListener(new ActionListener()
     {
@@ -430,36 +389,38 @@ public class GDesktop extends JFrame
       }
     });
 
+    Float specversion = Platform.isJS() ? Float.valueOf(8)
+            : Float.parseFloat(
+                    System.getProperty("java.specification.version"));
+
     desktopMenubar.add(FileMenu);
     desktopMenubar.add(toolsMenu);
-    VamsasMenu.setVisible(false);
-    desktopMenubar.add(VamsasMenu);
     desktopMenubar.add(HelpMenu);
     desktopMenubar.add(windowMenu);
     FileMenu.add(inputMenu);
     FileMenu.add(inputSequence);
     FileMenu.addSeparator();
-    FileMenu.add(saveState);
+    // FileMenu.add(saveState);
     FileMenu.add(saveAsState);
     FileMenu.add(loadState);
     FileMenu.addSeparator();
-    FileMenu.add(quit);
-    HelpMenu.add(aboutMenuItem);
+    if (!APQHandlers.setQuit)
+    {
+      FileMenu.add(quit);
+    }
+    if (!APQHandlers.setAbout)
+    {
+      HelpMenu.add(aboutMenuItem);
+    }
     HelpMenu.add(documentationMenuItem);
-    VamsasMenu.add(VamsasStMenu);
-    VamsasStMenu.setVisible(false);
-    VamsasMenu.add(vamsasStart);
-    VamsasMenu.add(vamsasImport);
-    VamsasMenu.add(vamsasSave);
-    VamsasMenu.add(vamsasStop);
-    toolsMenu.add(preferences);
-    if (!Platform.isJS())
+    if (!APQHandlers.setPreferences)
     {
-      toolsMenu.add(showMemusage);
-      toolsMenu.add(showConsole);
+      toolsMenu.add(preferences);
     }
     if (!Platform.isJS())
     {
+      toolsMenu.add(showMemusage);
+      toolsMenu.add(showConsole);
       toolsMenu.add(showNews);
       toolsMenu.add(garbageCollect);
       toolsMenu.add(groovyShell);
@@ -561,6 +522,7 @@ public class GDesktop extends JFrame
    */
   protected void quit()
   {
+    // System.out.println("********** GDesktop.quit()");
   }
 
   /**