X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=src%2Fjalview%2Fxml%2Fbinding%2Funiprot%2FSourceDataType.java;h=3b71bae25b8908b01a6306aa9e89b9f31f1c6cda;hp=c3838ec7a5e7d65f69c7ec900f9a137adaba3804;hb=57738a1f3c19b1c3a00bd3ac5108f8cd0af32f99;hpb=e7338a61f3ce96dadf44ac80b2b32cc5ba4b94c8
diff --git a/src/jalview/xml/binding/uniprot/SourceDataType.java b/src/jalview/xml/binding/uniprot/SourceDataType.java
index c3838ec..3b71bae 100644
--- a/src/jalview/xml/binding/uniprot/SourceDataType.java
+++ b/src/jalview/xml/binding/uniprot/SourceDataType.java
@@ -5,7 +5,6 @@
// Generated on: 2019.04.05 at 08:01:44 AM BST
//
-
package jalview.xml.binding.uniprot;
import java.util.ArrayList;
@@ -18,14 +17,16 @@ import javax.xml.bind.annotation.XmlElements;
import javax.xml.bind.annotation.XmlType;
import javax.xml.bind.annotation.XmlValue;
-
/**
- * Describes the source of the sequence according to the citation.
- * Equivalent to the flat file RC-line.
+ * Describes the source of the sequence according to the citation. Equivalent to
+ * the flat file RC-line.
*
- * Java class for sourceDataType complex type.
+ *
+ * Java class for sourceDataType complex type.
*
- *
The following schema fragment specifies the expected content contained within this class.
+ *
+ * The following schema fragment specifies the expected content contained within
+ * this class.
*
*
* <complexType name="sourceDataType">
@@ -77,385 +78,401 @@ import javax.xml.bind.annotation.XmlValue;
*
*/
@XmlAccessorType(XmlAccessType.FIELD)
-@XmlType(name = "sourceDataType", propOrder = {
- "strainOrPlasmidOrTransposon"
-})
-public class SourceDataType {
-
- @XmlElements({
- @XmlElement(name = "strain", type = SourceDataType.Strain.class),
- @XmlElement(name = "plasmid", type = SourceDataType.Plasmid.class),
- @XmlElement(name = "transposon", type = SourceDataType.Transposon.class),
- @XmlElement(name = "tissue", type = SourceDataType.Tissue.class)
- })
- protected List strainOrPlasmidOrTransposon;
+@XmlType(
+ name = "sourceDataType",
+ propOrder =
+ { "strainOrPlasmidOrTransposon" })
+public class SourceDataType
+{
+
+ @XmlElements({
+ @XmlElement(name = "strain", type = SourceDataType.Strain.class),
+ @XmlElement(name = "plasmid", type = SourceDataType.Plasmid.class),
+ @XmlElement(
+ name = "transposon",
+ type = SourceDataType.Transposon.class),
+ @XmlElement(name = "tissue", type = SourceDataType.Tissue.class) })
+ protected List strainOrPlasmidOrTransposon;
+
+ /**
+ * Gets the value of the strainOrPlasmidOrTransposon property.
+ *
+ *
+ * This accessor method returns a reference to the live list, not a snapshot.
+ * Therefore any modification you make to the returned list will be present
+ * inside the JAXB object. This is why there is not a set method
+ * for the strainOrPlasmidOrTransposon property.
+ *
+ *
+ * For example, to add a new item, do as follows:
+ *
+ *
+ * getStrainOrPlasmidOrTransposon().add(newItem);
+ *
+ *
+ *
+ *
+ * Objects of the following type(s) are allowed in the list
+ * {@link SourceDataType.Strain } {@link SourceDataType.Plasmid }
+ * {@link SourceDataType.Transposon } {@link SourceDataType.Tissue }
+ *
+ *
+ */
+ public List getStrainOrPlasmidOrTransposon()
+ {
+ if (strainOrPlasmidOrTransposon == null)
+ {
+ strainOrPlasmidOrTransposon = new ArrayList();
+ }
+ return this.strainOrPlasmidOrTransposon;
+ }
+
+ /**
+ *
+ * Java class for anonymous complex type.
+ *
+ *
+ * The following schema fragment specifies the expected content contained
+ * within this class.
+ *
+ *
+ * <complexType>
+ * <simpleContent>
+ * <extension base="<http://www.w3.org/2001/XMLSchema>string">
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </extension>
+ * </simpleContent>
+ * </complexType>
+ *
+ *
+ *
+ */
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = { "value" })
+ public static class Plasmid
+ {
+
+ @XmlValue
+ protected String value;
+
+ @XmlAttribute(name = "evidence")
+ protected List evidence;
+
+ /**
+ * Gets the value of the value property.
+ *
+ * @return possible object is {@link String }
+ *
+ */
+ public String getValue()
+ {
+ return value;
+ }
/**
- * Gets the value of the strainOrPlasmidOrTransposon property.
+ * Sets the value of the value property.
+ *
+ * @param value
+ * allowed object is {@link String }
+ *
+ */
+ public void setValue(String value)
+ {
+ this.value = value;
+ }
+
+ /**
+ * Gets the value of the evidence property.
*
*
- * This accessor method returns a reference to the live list,
- * not a snapshot. Therefore any modification you make to the
- * returned list will be present inside the JAXB object.
- * This is why there is not a set method for the strainOrPlasmidOrTransposon property.
+ * This accessor method returns a reference to the live list, not a
+ * snapshot. Therefore any modification you make to the returned list will
+ * be present inside the JAXB object. This is why there is not a
+ * set method for the evidence property.
*
*
* For example, to add a new item, do as follows:
+ *
*
- * getStrainOrPlasmidOrTransposon().add(newItem);
+ * getEvidence().add(newItem);
*
*
*
*
- * Objects of the following type(s) are allowed in the list
- * {@link SourceDataType.Strain }
- * {@link SourceDataType.Plasmid }
- * {@link SourceDataType.Transposon }
- * {@link SourceDataType.Tissue }
+ * Objects of the following type(s) are allowed in the list {@link Integer }
*
*
*/
- public List getStrainOrPlasmidOrTransposon() {
- if (strainOrPlasmidOrTransposon == null) {
- strainOrPlasmidOrTransposon = new ArrayList();
- }
- return this.strainOrPlasmidOrTransposon;
+ public List getEvidence()
+ {
+ if (evidence == null)
+ {
+ evidence = new ArrayList();
+ }
+ return this.evidence;
}
+ }
+
+ /**
+ *
+ * Java class for anonymous complex type.
+ *
+ *
+ * The following schema fragment specifies the expected content contained
+ * within this class.
+ *
+ *
+ * <complexType>
+ * <simpleContent>
+ * <extension base="<http://www.w3.org/2001/XMLSchema>string">
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </extension>
+ * </simpleContent>
+ * </complexType>
+ *
+ *
+ *
+ */
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = { "value" })
+ public static class Strain
+ {
+
+ @XmlValue
+ protected String value;
+
+ @XmlAttribute(name = "evidence")
+ protected List evidence;
/**
- * Java class for anonymous complex type.
+ * Gets the value of the value property.
*
- *
The following schema fragment specifies the expected content contained within this class.
+ * @return possible object is {@link String }
*
- *
- * <complexType>
- * <simpleContent>
- * <extension base="<http://www.w3.org/2001/XMLSchema>string">
- * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
- * </extension>
- * </simpleContent>
- * </complexType>
- *
+ */
+ public String getValue()
+ {
+ return value;
+ }
+
+ /**
+ * Sets the value of the value property.
*
+ * @param value
+ * allowed object is {@link String }
*
*/
- @XmlAccessorType(XmlAccessType.FIELD)
- @XmlType(name = "", propOrder = {
- "value"
- })
- public static class Plasmid {
-
- @XmlValue
- protected String value;
- @XmlAttribute(name = "evidence")
- protected List evidence;
-
- /**
- * Gets the value of the value property.
- *
- * @return
- * possible object is
- * {@link String }
- *
- */
- public String getValue() {
- return value;
- }
-
- /**
- * Sets the value of the value property.
- *
- * @param value
- * allowed object is
- * {@link String }
- *
- */
- public void setValue(String value) {
- this.value = value;
- }
-
- /**
- * Gets the value of the evidence property.
- *
- *
- * This accessor method returns a reference to the live list,
- * not a snapshot. Therefore any modification you make to the
- * returned list will be present inside the JAXB object.
- * This is why there is not a set method for the evidence property.
- *
- *
- * For example, to add a new item, do as follows:
- *
- * getEvidence().add(newItem);
- *
- *
- *
- *
- * Objects of the following type(s) are allowed in the list
- * {@link Integer }
- *
- *
- */
- public List getEvidence() {
- if (evidence == null) {
- evidence = new ArrayList();
- }
- return this.evidence;
- }
-
+ public void setValue(String value)
+ {
+ this.value = value;
}
-
/**
- * Java class for anonymous complex type.
+ * Gets the value of the evidence property.
*
- *
The following schema fragment specifies the expected content contained within this class.
+ *
+ * This accessor method returns a reference to the live list, not a
+ * snapshot. Therefore any modification you make to the returned list will
+ * be present inside the JAXB object. This is why there is not a
+ * set method for the evidence property.
+ *
+ *
+ * For example, to add a new item, do as follows:
*
*
- * <complexType>
- * <simpleContent>
- * <extension base="<http://www.w3.org/2001/XMLSchema>string">
- * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
- * </extension>
- * </simpleContent>
- * </complexType>
+ * getEvidence().add(newItem);
*
*
*
+ *
+ * Objects of the following type(s) are allowed in the list {@link Integer }
+ *
+ *
*/
- @XmlAccessorType(XmlAccessType.FIELD)
- @XmlType(name = "", propOrder = {
- "value"
- })
- public static class Strain {
-
- @XmlValue
- protected String value;
- @XmlAttribute(name = "evidence")
- protected List evidence;
-
- /**
- * Gets the value of the value property.
- *
- * @return
- * possible object is
- * {@link String }
- *
- */
- public String getValue() {
- return value;
- }
-
- /**
- * Sets the value of the value property.
- *
- * @param value
- * allowed object is
- * {@link String }
- *
- */
- public void setValue(String value) {
- this.value = value;
- }
-
- /**
- * Gets the value of the evidence property.
- *
- *
- * This accessor method returns a reference to the live list,
- * not a snapshot. Therefore any modification you make to the
- * returned list will be present inside the JAXB object.
- * This is why there is not a set method for the evidence property.
- *
- *
- * For example, to add a new item, do as follows:
- *
- * getEvidence().add(newItem);
- *
- *
- *
- *
- * Objects of the following type(s) are allowed in the list
- * {@link Integer }
- *
- *
- */
- public List getEvidence() {
- if (evidence == null) {
- evidence = new ArrayList();
- }
- return this.evidence;
- }
+ public List getEvidence()
+ {
+ if (evidence == null)
+ {
+ evidence = new ArrayList();
+ }
+ return this.evidence;
+ }
+
+ }
+
+ /**
+ *
+ * Java class for anonymous complex type.
+ *
+ *
+ * The following schema fragment specifies the expected content contained
+ * within this class.
+ *
+ *
+ * <complexType>
+ * <simpleContent>
+ * <extension base="<http://www.w3.org/2001/XMLSchema>string">
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </extension>
+ * </simpleContent>
+ * </complexType>
+ *
+ *
+ *
+ */
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = { "value" })
+ public static class Tissue
+ {
+
+ @XmlValue
+ protected String value;
+
+ @XmlAttribute(name = "evidence")
+ protected List evidence;
+ /**
+ * Gets the value of the value property.
+ *
+ * @return possible object is {@link String }
+ *
+ */
+ public String getValue()
+ {
+ return value;
}
+ /**
+ * Sets the value of the value property.
+ *
+ * @param value
+ * allowed object is {@link String }
+ *
+ */
+ public void setValue(String value)
+ {
+ this.value = value;
+ }
/**
- * Java class for anonymous complex type.
+ * Gets the value of the evidence property.
*
- *
The following schema fragment specifies the expected content contained within this class.
+ *
+ * This accessor method returns a reference to the live list, not a
+ * snapshot. Therefore any modification you make to the returned list will
+ * be present inside the JAXB object. This is why there is not a
+ * set method for the evidence property.
+ *
+ *
+ * For example, to add a new item, do as follows:
*
*
- * <complexType>
- * <simpleContent>
- * <extension base="<http://www.w3.org/2001/XMLSchema>string">
- * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
- * </extension>
- * </simpleContent>
- * </complexType>
+ * getEvidence().add(newItem);
*
*
*
+ *
+ * Objects of the following type(s) are allowed in the list {@link Integer }
+ *
+ *
*/
- @XmlAccessorType(XmlAccessType.FIELD)
- @XmlType(name = "", propOrder = {
- "value"
- })
- public static class Tissue {
-
- @XmlValue
- protected String value;
- @XmlAttribute(name = "evidence")
- protected List evidence;
-
- /**
- * Gets the value of the value property.
- *
- * @return
- * possible object is
- * {@link String }
- *
- */
- public String getValue() {
- return value;
- }
-
- /**
- * Sets the value of the value property.
- *
- * @param value
- * allowed object is
- * {@link String }
- *
- */
- public void setValue(String value) {
- this.value = value;
- }
-
- /**
- * Gets the value of the evidence property.
- *
- *
- * This accessor method returns a reference to the live list,
- * not a snapshot. Therefore any modification you make to the
- * returned list will be present inside the JAXB object.
- * This is why there is not a set method for the evidence property.
- *
- *
- * For example, to add a new item, do as follows:
- *
- * getEvidence().add(newItem);
- *
- *
- *
- *
- * Objects of the following type(s) are allowed in the list
- * {@link Integer }
- *
- *
- */
- public List getEvidence() {
- if (evidence == null) {
- evidence = new ArrayList();
- }
- return this.evidence;
- }
+ public List getEvidence()
+ {
+ if (evidence == null)
+ {
+ evidence = new ArrayList();
+ }
+ return this.evidence;
+ }
+ }
+
+ /**
+ *
+ * Java class for anonymous complex type.
+ *
+ *
+ * The following schema fragment specifies the expected content contained
+ * within this class.
+ *
+ *
+ * <complexType>
+ * <simpleContent>
+ * <extension base="<http://www.w3.org/2001/XMLSchema>string">
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </extension>
+ * </simpleContent>
+ * </complexType>
+ *
+ *
+ *
+ */
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = { "value" })
+ public static class Transposon
+ {
+
+ @XmlValue
+ protected String value;
+
+ @XmlAttribute(name = "evidence")
+ protected List evidence;
+
+ /**
+ * Gets the value of the value property.
+ *
+ * @return possible object is {@link String }
+ *
+ */
+ public String getValue()
+ {
+ return value;
}
+ /**
+ * Sets the value of the value property.
+ *
+ * @param value
+ * allowed object is {@link String }
+ *
+ */
+ public void setValue(String value)
+ {
+ this.value = value;
+ }
/**
- * Java class for anonymous complex type.
+ * Gets the value of the evidence property.
*
- *
The following schema fragment specifies the expected content contained within this class.
+ *
+ * This accessor method returns a reference to the live list, not a
+ * snapshot. Therefore any modification you make to the returned list will
+ * be present inside the JAXB object. This is why there is not a
+ * set method for the evidence property.
+ *
+ *
+ * For example, to add a new item, do as follows:
*
*
- * <complexType>
- * <simpleContent>
- * <extension base="<http://www.w3.org/2001/XMLSchema>string">
- * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
- * </extension>
- * </simpleContent>
- * </complexType>
+ * getEvidence().add(newItem);
*
*
*
+ *
+ * Objects of the following type(s) are allowed in the list {@link Integer }
+ *
+ *
*/
- @XmlAccessorType(XmlAccessType.FIELD)
- @XmlType(name = "", propOrder = {
- "value"
- })
- public static class Transposon {
-
- @XmlValue
- protected String value;
- @XmlAttribute(name = "evidence")
- protected List evidence;
-
- /**
- * Gets the value of the value property.
- *
- * @return
- * possible object is
- * {@link String }
- *
- */
- public String getValue() {
- return value;
- }
-
- /**
- * Sets the value of the value property.
- *
- * @param value
- * allowed object is
- * {@link String }
- *
- */
- public void setValue(String value) {
- this.value = value;
- }
-
- /**
- * Gets the value of the evidence property.
- *
- *
- * This accessor method returns a reference to the live list,
- * not a snapshot. Therefore any modification you make to the
- * returned list will be present inside the JAXB object.
- * This is why there is not a set method for the evidence property.
- *
- *
- * For example, to add a new item, do as follows:
- *
- * getEvidence().add(newItem);
- *
- *
- *
- *
- * Objects of the following type(s) are allowed in the list
- * {@link Integer }
- *
- *
- */
- public List getEvidence() {
- if (evidence == null) {
- evidence = new ArrayList();
- }
- return this.evidence;
- }
-
+ public List getEvidence()
+ {
+ if (evidence == null)
+ {
+ evidence = new ArrayList();
+ }
+ return this.evidence;
}
+ }
+
}