X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=test%2Fjalview%2Fio%2FAnnotatedPDBFileInputTest.java;h=150ee5925f5694b3b0195eee369c146ec6f912c9;hp=31bfd9de3658cd334232ceda6be758fd4a782c18;hb=06e3a52df5af8243cdb67c023c8ddd834711ad36;hpb=2d03102b7c6af888fda6676a90497b8d71a14f11 diff --git a/test/jalview/io/AnnotatedPDBFileInputTest.java b/test/jalview/io/AnnotatedPDBFileInputTest.java index 31bfd9d..150ee59 100644 --- a/test/jalview/io/AnnotatedPDBFileInputTest.java +++ b/test/jalview/io/AnnotatedPDBFileInputTest.java @@ -43,7 +43,7 @@ public class AnnotatedPDBFileInputTest AlignFrame af = loader.LoadFileWaitTillLoaded(pdbStr, FormatAdapter.FILE); al = af.getViewport().getAlignment(); - pdbId = al.getSequenceAt(0).getDatasetSequence().getPDBId() + pdbId = al.getSequenceAt(0).getDatasetSequence().getAllPDBEntries() .get(0).getId(); } @@ -197,9 +197,9 @@ public class AnnotatedPDBFileInputTest { sq = sq.getDatasetSequence(); } - assertNotNull(sq.getPDBId()); - assertEquals("Expected only one PDB ID", sq.getPDBId().size(), 1); - for (PDBEntry pdbentry : sq.getPDBId()) + assertNotNull(sq.getAllPDBEntries()); + assertEquals("Expected only one PDB ID", sq.getAllPDBEntries().size(), 1); + for (PDBEntry pdbentry : sq.getAllPDBEntries()) { System.err.println("PDB Entry " + pdbentry.getId() + " " + pdbentry.getFile());