JAL-4026 increase timeouts for command line ops

diff --git a/test/jalview/bin/CommandLineOperations.java b/test/jalview/bin/CommandLineOperations.java
index 2d8ebce..3bfd4f3 100644 (file)
--- a/test/jalview/bin/CommandLineOperations.java
+++ b/test/jalview/bin/CommandLineOperations.java
@@ -23,8 +23,6 @@ package jalview.bin;
 import static org.testng.Assert.assertNotNull;
 import static org.testng.Assert.assertTrue;
 
-import jalview.gui.JvOptionPane;
-
 import java.io.BufferedReader;
 import java.io.File;
 import java.io.IOException;
@@ -43,6 +41,7 @@ import org.testng.annotations.Test;
 import io.github.classgraph.ClassGraph;
 import io.github.classgraph.ModuleRef;
 import io.github.classgraph.ScanResult;
+import jalview.gui.JvOptionPane;
 
 public class CommandLineOperations
 {
@@ -54,12 +53,12 @@ public class CommandLineOperations
     JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
   }
 
-  private static final int TEST_TIMEOUT = 12500; // Note longer timeout needed
+  private static final int TEST_TIMEOUT = 13000; // Note longer timeout needed
                                                  // on
                                                  // full test run than on
                                                  // individual tests
 
-  private static final int SETUP_TIMEOUT = 9000;
+  private static final int SETUP_TIMEOUT = 9500;
 
   private static final int MINFILESIZE_SMALL = 2096;
 
@@ -257,6 +256,7 @@ public class CommandLineOperations
     // STDERR_SETUPLINES have been read
     Thread runner = new Thread(new Runnable()
     {
+      @Override
       public void run()
       {
         String ln = null;