From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Thu, 27 Aug 2015 10:59:03 +0000 (+0100)
Subject: JAL-892 JAL-1764 Varna and Chimera also saved to project file
X-Git-Tag: Jalview_2_9~10^2~12
X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=commitdiff_plain;h=0bd2b8d583ffd12b34d2da375f05a5415d79bab0

JAL-892 JAL-1764 Varna and Chimera also saved to project file
---

diff --git a/help/html/io/index.html b/help/html/io/index.html
index 40e8f89..69c3a1f 100755
--- a/help/html/io/index.html
+++ b/help/html/io/index.html
@@ -48,7 +48,7 @@ an unknown format or there is any other error reading the alignment file
 then you will be given an error message. If you think Jalview really
 should be able to read your file, then send an email containing the
 problem file to help@jalview.org.</p>
-<p>Jalview can also read jalview specific files for <a
+<p>Jalview can also read Jalview specific files for <a
 	href="../features/featuresFormat.html">sequence features</a> and <a
 	href="../features/annotationsFormat.html">alignment annotation</a>.</p>
 <p><strong>Output</strong></p>
@@ -71,7 +71,7 @@ annotation</a> can be exported as a comma separated value file by right
 clicking on an annotation row under the alignment.</p>
 <p>You can also save the current set of alignments and their
 colours, annotations and trees in a Jalview archive file using <strong>Desktop&#8594;Save
-project</strong>.</p>
+project</strong>.<br>The project data includes the state of any open structure viewers (Jmol, and <em>since Jalview 2.9</em> also Chimera and Varna).</p>
 <p>&nbsp;</p>
 </body>
 </html>