From: Jim Procter <jprocter@issues.jalview.org>
Date: Mon, 27 Jul 2020 14:05:30 +0000 (+0100)
Subject: JAL-3696 log the error message from the exception to the console
X-Git-Tag: Release_2_11_1_1~22^2~13
X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=commitdiff_plain;h=3e9994aa2c41803671f7535a59834ba235cf1d05

JAL-3696 log the error message from the exception to the console
---

diff --git a/src/jalview/io/vcf/VCFLoader.java b/src/jalview/io/vcf/VCFLoader.java
index a44ee26..13d7ae8 100644
--- a/src/jalview/io/vcf/VCFLoader.java
+++ b/src/jalview/io/vcf/VCFLoader.java
@@ -912,7 +912,7 @@ public class VCFLoader
          * RuntimeException throwable by htsjdk
          */
         String msg = String.format("Error reading VCF for %s:%d-%d: %s ",
-                map.chromosome, vcfStart, vcfEnd);
+                map.chromosome, vcfStart, vcfEnd,e.getLocalizedMessage());
         Cache.log.error(msg);
       }
     }