From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Thu, 18 Sep 2014 08:29:57 +0000 (+0100)
Subject: JAL-1544 it's --> its
X-Git-Tag: Release_2_8_2b1^2~53^2~5
X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=commitdiff_plain;h=b528740d54b70ef784725aca3122eeceabcff8f9

JAL-1544 it's --> its
---

diff --git a/help/html/calculations/consensus.html b/help/html/calculations/consensus.html
index 6df11da..bc42278 100644
--- a/help/html/calculations/consensus.html
+++ b/help/html/calculations/consensus.html
@@ -37,7 +37,7 @@ clipboard.
 <p><strong>Sequence logo</strong></p>
 	By clicking on the label you can also activate the sequence logo. It
 	indicates the relative amount of residues per column which can be
-	estimated by it's size in the logo. The tooltip of a column gives the
+	estimated by its size in the logo. The tooltip of a column gives the
 	exact numbers for all occuring residues.
 	<br />If columns of the alignment are very diverse, then it can
 	sometimes be difficult to see the sequence logo - in this case, right
diff --git a/help/html/calculations/structureconsensus.html b/help/html/calculations/structureconsensus.html
index 097068d..6e797b1 100755
--- a/help/html/calculations/structureconsensus.html
+++ b/help/html/calculations/structureconsensus.html
@@ -40,7 +40,7 @@ similar to a sequence logo but counts the numbers of base pairs. There
 are two residues per column, the actual column and the interacting
 base. The opening bracket is always the one on the left side.<br>
 Like sequence logos the relative amount of a specific base pair can be
-estimated by it's size in the logo. The tool tip of a column gives the
+estimated by its size in the logo. The tool tip of a column gives the
 exact numbers for all occurring valid base pairs.
 </p>
 </body>
diff --git a/help/html/features/groovy.html b/help/html/features/groovy.html
index 4185cc7..6559fd1 100644
--- a/help/html/features/groovy.html
+++ b/help/html/features/groovy.html
@@ -44,7 +44,7 @@
 		The jars are obtained from the <em>embedded</em> directory within the
 		<a href="http://dist.codehaus.org/groovy/distributions">groovy
 			distribution</a>. The easiest way of adding them to the Jalview classpath
-		is to download and build jalview from it's source distribution, and
+		is to download and build jalview from its source distribution, and
 		then add the groovy-all-*.jar to the lib directory whose path is given
 		in the java.ext.dirs property.
 	</p>
diff --git a/help/html/webServices/dbreffetcher.html b/help/html/webServices/dbreffetcher.html
index 382991b..ad42153 100644
--- a/help/html/webServices/dbreffetcher.html
+++ b/help/html/webServices/dbreffetcher.html
@@ -45,7 +45,7 @@ of ID queries from the ID string of each sequence in the alignment. It
 then tries to query a subset of all the databases it can access in order to match
 the alignment sequence to any records retrieved from the database. If a
 match is found, then the sequence is annotated with that database's
-reference, and any cross-references that it's records contain.</p>
+reference, and any cross-references that its records contain.</p>
 <p><strong>The Sequence Identification Process</strong><br>
 The method of accession id discovery is derived from the method which
 earlier Jalview versions used for Uniprot sequence feature retrieval,