From: Ben Soares <b.soares@dundee.ac.uk>
Date: Sat, 2 Sep 2023 14:14:51 +0000 (+0100)
Subject: JAL-629 Add accessors for argParser and bootstrapArgs
X-Git-Tag: Release_2_11_3_0~8^2~27^2
X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=commitdiff_plain;h=b7175b93f334b38b41eb5cf53bd4f45983ba7c53

JAL-629 Add accessors for argParser and bootstrapArgs
---

diff --git a/src/jalview/bin/Console.java b/src/jalview/bin/Console.java
index 20926cd..1b230ec 100644
--- a/src/jalview/bin/Console.java
+++ b/src/jalview/bin/Console.java
@@ -337,8 +337,8 @@ public class Console
   {
     // send message to stderr if an output file to stdout is expected
     if (!forceStdout && Jalview.getInstance() != null
-            && Jalview.getInstance().bootstrapArgs != null
-            && Jalview.getInstance().bootstrapArgs.outputToStdout())
+            && Jalview.getInstance().getBootstrapArgs() != null
+            && Jalview.getInstance().getBootstrapArgs().outputToStdout())
     {
       return System.err;
     }
diff --git a/src/jalview/bin/Jalview.java b/src/jalview/bin/Jalview.java
index 6c33812..af638c8 100755
--- a/src/jalview/bin/Jalview.java
+++ b/src/jalview/bin/Jalview.java
@@ -139,9 +139,9 @@ public class Jalview
 
   public static AlignFrame currentAlignFrame;
 
-  public ArgParser argparser = null;
+  private ArgParser argparser = null;
 
-  public BootstrapArgs bootstrapArgs = null;
+  private BootstrapArgs bootstrapArgs = null;
 
   private boolean QUIET = false;
 
@@ -1952,4 +1952,15 @@ public class Jalview
     }
     Console.outPrintln("[TESTOUTPUT] arg " + message);
   }
+
+  public ArgParser getArgParser()
+  {
+    return argparser;
+  }
+
+  public BootstrapArgs getBootstrapArgs()
+  {
+    return bootstrapArgs;
+  }
+
 }