From: Ben Soares Date: Thu, 8 Nov 2018 16:53:42 +0000 (+0000) Subject: JAL-1988 JAL-3130 Now we're in Java 11 land, using jdeps and jlink have made a pared... X-Git-Tag: Release_2_11_0~17^2~7^2~58^2~21 X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=commitdiff_plain;h=c043b91227c31bdb6178086bfd0a633c6de510aa JAL-1988 JAL-3130 Now we're in Java 11 land, using jdeps and jlink have made a pared down Java 11 (44MB) in jalview_java. Run with './jalview_java/bin/java -cp "classes:lib/*:j11lib/*" jalview.bin.Jalview'. --- diff --git a/j11lib/saaj-impl.jar b/j11lib/saaj-impl.jar deleted file mode 100644 index 7eda25c..0000000 Binary files a/j11lib/saaj-impl.jar and /dev/null differ diff --git a/jalview_java/bin/java b/jalview_java/bin/java new file mode 100755 index 0000000..b824345 Binary files /dev/null and b/jalview_java/bin/java differ diff --git a/jalview_java/bin/keytool b/jalview_java/bin/keytool new file mode 100755 index 0000000..5d22523 Binary files /dev/null and b/jalview_java/bin/keytool differ diff --git a/jalview_java/bin/rmid b/jalview_java/bin/rmid new file mode 100755 index 0000000..d483c7a Binary files /dev/null and b/jalview_java/bin/rmid differ diff --git a/jalview_java/bin/rmiregistry b/jalview_java/bin/rmiregistry new file mode 100755 index 0000000..5ac975f Binary files /dev/null and b/jalview_java/bin/rmiregistry differ diff --git a/jalview_java/conf/logging.properties b/jalview_java/conf/logging.properties new file mode 100644 index 0000000..58997e5 --- /dev/null +++ b/jalview_java/conf/logging.properties @@ -0,0 +1,63 @@ +############################################################ +# Default Logging Configuration File +# +# You can use a different file by specifying a filename +# with the java.util.logging.config.file system property. +# For example java -Djava.util.logging.config.file=myfile +############################################################ + +############################################################ +# Global properties +############################################################ + +# "handlers" specifies a comma separated list of log Handler +# classes. These handlers will be installed during VM startup. +# Note that these classes must be on the system classpath. +# By default we only configure a ConsoleHandler, which will only +# show messages at the INFO and above levels. +handlers= java.util.logging.ConsoleHandler + +# To also add the FileHandler, use the following line instead. +#handlers= java.util.logging.FileHandler, java.util.logging.ConsoleHandler + +# Default global logging level. +# This specifies which kinds of events are logged across +# all loggers. For any given facility this global level +# can be overriden by a facility specific level +# Note that the ConsoleHandler also has a separate level +# setting to limit messages printed to the console. +.level= INFO + +############################################################ +# Handler specific properties. +# Describes specific configuration info for Handlers. +############################################################ + +# default file output is in user's home directory. +java.util.logging.FileHandler.pattern = %h/java%u.log +java.util.logging.FileHandler.limit = 50000 +java.util.logging.FileHandler.count = 1 +# Default number of locks FileHandler can obtain synchronously. +# This specifies maximum number of attempts to obtain lock file by FileHandler +# implemented by incrementing the unique field %u as per FileHandler API documentation. +java.util.logging.FileHandler.maxLocks = 100 +java.util.logging.FileHandler.formatter = java.util.logging.XMLFormatter + +# Limit the message that are printed on the console to INFO and above. +java.util.logging.ConsoleHandler.level = INFO +java.util.logging.ConsoleHandler.formatter = java.util.logging.SimpleFormatter + +# Example to customize the SimpleFormatter output format +# to print one-line log message like this: +# : [] +# +# java.util.logging.SimpleFormatter.format=%4$s: %5$s [%1$tc]%n + +############################################################ +# Facility specific properties. +# Provides extra control for each logger. +############################################################ + +# For example, set the com.xyz.foo logger to only log SEVERE +# messages: +com.xyz.foo.level = SEVERE diff --git a/jalview_java/conf/net.properties b/jalview_java/conf/net.properties new file mode 100644 index 0000000..ac94b30 --- /dev/null +++ b/jalview_java/conf/net.properties @@ -0,0 +1,101 @@ +############################################################ +# Default Networking Configuration File +# +# This file may contain default values for the networking system properties. +# These values are only used when the system properties are not specified +# on the command line or set programmatically. +# For now, only the various proxy settings can be configured here. +############################################################ + +# Whether or not the DefaultProxySelector will default to System Proxy +# settings when they do exist. +# Set it to 'true' to enable this feature and check for platform +# specific proxy settings +# Note that the system properties that do explicitly set proxies +# (like http.proxyHost) do take precedence over the system settings +# even if java.net.useSystemProxies is set to true. + +java.net.useSystemProxies=false + +#------------------------------------------------------------------------ +# Proxy configuration for the various protocol handlers. +# DO NOT uncomment these lines if you have set java.net.useSystemProxies +# to true as the protocol specific properties will take precedence over +# system settings. +#------------------------------------------------------------------------ + +# HTTP Proxy settings. proxyHost is the name of the proxy server +# (e.g. proxy.mydomain.com), proxyPort is the port number to use (default +# value is 80) and nonProxyHosts is a '|' separated list of hostnames which +# should be accessed directly, ignoring the proxy server (default value is +# localhost & 127.0.0.1). +# +# http.proxyHost= +# http.proxyPort=80 +http.nonProxyHosts=localhost|127.*|[::1] +# +# HTTPS Proxy Settings. proxyHost is the name of the proxy server +# (e.g. proxy.mydomain.com), proxyPort is the port number to use (default +# value is 443). The HTTPS protocol handlers uses the http nonProxyHosts list. +# +# https.proxyHost= +# https.proxyPort=443 +# +# FTP Proxy settings. proxyHost is the name of the proxy server +# (e.g. proxy.mydomain.com), proxyPort is the port number to use (default +# value is 80) and nonProxyHosts is a '|' separated list of hostnames which +# should be accessed directly, ignoring the proxy server (default value is +# localhost & 127.0.0.1). +# +# ftp.proxyHost= +# ftp.proxyPort=80 +ftp.nonProxyHosts=localhost|127.*|[::1] +# +# Gopher Proxy settings. proxyHost is the name of the proxy server +# (e.g. proxy.mydomain.com), proxyPort is the port number to use (default +# value is 80) +# +# gopher.proxyHost= +# gopher.proxyPort=80 +# +# Socks proxy settings. socksProxyHost is the name of the proxy server +# (e.g. socks.domain.com), socksProxyPort is the port number to use +# (default value is 1080) +# +# socksProxyHost= +# socksProxyPort=1080 +# +# HTTP Keep Alive settings. remainingData is the maximum amount of data +# in kilobytes that will be cleaned off the underlying socket so that it +# can be reused (default value is 512K), queuedConnections is the maximum +# number of Keep Alive connections to be on the queue for clean up (default +# value is 10). +# http.KeepAlive.remainingData=512 +# http.KeepAlive.queuedConnections=10 + +# Authentication Scheme restrictions for HTTP and HTTPS. +# +# In some environments certain authentication schemes may be undesirable +# when proxying HTTP or HTTPS. For example, "Basic" results in effectively the +# cleartext transmission of the user's password over the physical network. +# This section describes the mechanism for disabling authentication schemes +# based on the scheme name. Disabled schemes will be treated as if they are not +# supported by the implementation. +# +# The 'jdk.http.auth.tunneling.disabledSchemes' property lists the authentication +# schemes that will be disabled when tunneling HTTPS over a proxy, HTTP CONNECT. +# The 'jdk.http.auth.proxying.disabledSchemes' property lists the authentication +# schemes that will be disabled when proxying HTTP. +# +# In both cases the property is a comma-separated list of, case-insensitive, +# authentication scheme names, as defined by their relevant RFCs. An +# implementation may, but is not required to, support common schemes whose names +# include: 'Basic', 'Digest', 'NTLM', 'Kerberos', 'Negotiate'. A scheme that +# is not known, or not supported, by the implementation is ignored. +# +# Note: This property is currently used by the JDK Reference implementation. It +# is not guaranteed to be examined and used by other implementations. +# +#jdk.http.auth.proxying.disabledSchemes= +jdk.http.auth.tunneling.disabledSchemes=Basic + diff --git a/jalview_java/conf/security/java.policy b/jalview_java/conf/security/java.policy new file mode 100644 index 0000000..1554541 --- /dev/null +++ b/jalview_java/conf/security/java.policy @@ -0,0 +1,44 @@ +// +// This system policy file grants a set of default permissions to all domains +// and can be configured to grant additional permissions to modules and other +// code sources. The code source URL scheme for modules linked into a +// run-time image is "jrt". +// +// For example, to grant permission to read the "foo" property to the module +// "com.greetings", the grant entry is: +// +// grant codeBase "jrt:/com.greetings" { +// permission java.util.PropertyPermission "foo", "read"; +// }; +// + +// default permissions granted to all domains +grant { + // allows anyone to listen on dynamic ports + permission java.net.SocketPermission "localhost:0", "listen"; + + // "standard" properies that can be read by anyone + permission java.util.PropertyPermission "java.version", "read"; + permission java.util.PropertyPermission "java.vendor", "read"; + permission java.util.PropertyPermission "java.vendor.url", "read"; + permission java.util.PropertyPermission "java.class.version", "read"; + permission java.util.PropertyPermission "os.name", "read"; + permission java.util.PropertyPermission "os.version", "read"; + permission java.util.PropertyPermission "os.arch", "read"; + permission java.util.PropertyPermission "file.separator", "read"; + permission java.util.PropertyPermission "path.separator", "read"; + permission java.util.PropertyPermission "line.separator", "read"; + permission java.util.PropertyPermission + "java.specification.version", "read"; + permission java.util.PropertyPermission "java.specification.vendor", "read"; + permission java.util.PropertyPermission "java.specification.name", "read"; + permission java.util.PropertyPermission + "java.vm.specification.version", "read"; + permission java.util.PropertyPermission + "java.vm.specification.vendor", "read"; + permission java.util.PropertyPermission + "java.vm.specification.name", "read"; + permission java.util.PropertyPermission "java.vm.version", "read"; + permission java.util.PropertyPermission "java.vm.vendor", "read"; + permission java.util.PropertyPermission "java.vm.name", "read"; +}; diff --git a/jalview_java/conf/security/java.security b/jalview_java/conf/security/java.security new file mode 100644 index 0000000..26beb23 --- /dev/null +++ b/jalview_java/conf/security/java.security @@ -0,0 +1,1065 @@ +# +# This is the "master security properties file". +# +# An alternate java.security properties file may be specified +# from the command line via the system property +# +# -Djava.security.properties= +# +# This properties file appends to the master security properties file. +# If both properties files specify values for the same key, the value +# from the command-line properties file is selected, as it is the last +# one loaded. +# +# Also, if you specify +# +# -Djava.security.properties== (2 equals), +# +# then that properties file completely overrides the master security +# properties file. +# +# To disable the ability to specify an additional properties file from +# the command line, set the key security.overridePropertiesFile +# to false in the master security properties file. It is set to true +# by default. + +# In this file, various security properties are set for use by +# java.security classes. This is where users can statically register +# Cryptography Package Providers ("providers" for short). The term +# "provider" refers to a package or set of packages that supply a +# concrete implementation of a subset of the cryptography aspects of +# the Java Security API. A provider may, for example, implement one or +# more digital signature algorithms or message digest algorithms. +# +# Each provider must implement a subclass of the Provider class. +# To register a provider in this master security properties file, +# specify the provider and priority in the format +# +# security.provider.= +# +# This declares a provider, and specifies its preference +# order n. The preference order is the order in which providers are +# searched for requested algorithms (when no specific provider is +# requested). The order is 1-based; 1 is the most preferred, followed +# by 2, and so on. +# +# must specify the name of the Provider as passed to its super +# class java.security.Provider constructor. This is for providers loaded +# through the ServiceLoader mechanism. +# +# must specify the subclass of the Provider class whose +# constructor sets the values of various properties that are required +# for the Java Security API to look up the algorithms or other +# facilities implemented by the provider. This is for providers loaded +# through classpath. +# +# Note: Providers can be dynamically registered instead by calls to +# either the addProvider or insertProviderAt method in the Security +# class. + +# +# List of providers and their preference orders (see above): +# +security.provider.1=SUN +security.provider.2=SunRsaSign +security.provider.3=SunEC +security.provider.4=SunJSSE +security.provider.5=SunJCE +security.provider.6=SunJGSS +security.provider.7=SunSASL +security.provider.8=XMLDSig +security.provider.9=SunPCSC +security.provider.10=JdkLDAP +security.provider.11=JdkSASL +security.provider.12=Apple +security.provider.13=SunPKCS11 + +# +# A list of preferred providers for specific algorithms. These providers will +# be searched for matching algorithms before the list of registered providers. +# Entries containing errors (parsing, etc) will be ignored. Use the +# -Djava.security.debug=jca property to debug these errors. +# +# The property is a comma-separated list of serviceType.algorithm:provider +# entries. The serviceType (example: "MessageDigest") is optional, and if +# not specified, the algorithm applies to all service types that support it. +# The algorithm is the standard algorithm name or transformation. +# Transformations can be specified in their full standard name +# (ex: AES/CBC/PKCS5Padding), or as partial matches (ex: AES, AES/CBC). +# The provider is the name of the provider. Any provider that does not +# also appear in the registered list will be ignored. +# +# There is a special serviceType for this property only to group a set of +# algorithms together. The type is "Group" and is followed by an algorithm +# keyword. Groups are to simplify and lessen the entries on the property +# line. Current groups are: +# Group.SHA2 = SHA-224, SHA-256, SHA-384, SHA-512, SHA-512/224, SHA-512/256 +# Group.HmacSHA2 = HmacSHA224, HmacSHA256, HmacSHA384, HmacSHA512 +# Group.SHA2RSA = SHA224withRSA, SHA256withRSA, SHA384withRSA, SHA512withRSA +# Group.SHA2DSA = SHA224withDSA, SHA256withDSA, SHA384withDSA, SHA512withDSA +# Group.SHA2ECDSA = SHA224withECDSA, SHA256withECDSA, SHA384withECDSA, \ +# SHA512withECDSA +# Group.SHA3 = SHA3-224, SHA3-256, SHA3-384, SHA3-512 +# Group.HmacSHA3 = HmacSHA3-224, HmacSHA3-256, HmacSHA3-384, HmacSHA3-512 +# +# Example: +# jdk.security.provider.preferred=AES/GCM/NoPadding:SunJCE, \ +# MessageDigest.SHA-256:SUN, Group.HmacSHA2:SunJCE +# +#jdk.security.provider.preferred= + + +# +# Sun Provider SecureRandom seed source. +# +# Select the primary source of seed data for the "NativePRNG", "SHA1PRNG" +# and "DRBG" SecureRandom implementations in the "Sun" provider. +# (Other SecureRandom implementations might also use this property.) +# +# On Unix-like systems (for example, Solaris/Linux/MacOS), the +# "NativePRNG", "SHA1PRNG" and "DRBG" implementations obtains seed data from +# special device files such as file:/dev/random. +# +# On Windows systems, specifying the URLs "file:/dev/random" or +# "file:/dev/urandom" will enable the native Microsoft CryptoAPI seeding +# mechanism for SHA1PRNG and DRBG. +# +# By default, an attempt is made to use the entropy gathering device +# specified by the "securerandom.source" Security property. If an +# exception occurs while accessing the specified URL: +# +# NativePRNG: +# a default value of /dev/random will be used. If neither +# are available, the implementation will be disabled. +# "file" is the only currently supported protocol type. +# +# SHA1PRNG and DRBG: +# the traditional system/thread activity algorithm will be used. +# +# The entropy gathering device can also be specified with the System +# property "java.security.egd". For example: +# +# % java -Djava.security.egd=file:/dev/random MainClass +# +# Specifying this System property will override the +# "securerandom.source" Security property. +# +# In addition, if "file:/dev/random" or "file:/dev/urandom" is +# specified, the "NativePRNG" implementation will be more preferred than +# DRBG and SHA1PRNG in the Sun provider. +# +securerandom.source=file:/dev/random + +# +# A list of known strong SecureRandom implementations. +# +# To help guide applications in selecting a suitable strong +# java.security.SecureRandom implementation, Java distributions should +# indicate a list of known strong implementations using the property. +# +# This is a comma-separated list of algorithm and/or algorithm:provider +# entries. +# +securerandom.strongAlgorithms=NativePRNGBlocking:SUN,DRBG:SUN + +# +# Sun provider DRBG configuration and default instantiation request. +# +# NIST SP 800-90Ar1 lists several DRBG mechanisms. Each can be configured +# with a DRBG algorithm name, and can be instantiated with a security strength, +# prediction resistance support, etc. This property defines the configuration +# and the default instantiation request of "DRBG" SecureRandom implementations +# in the SUN provider. (Other DRBG implementations can also use this property.) +# Applications can request different instantiation parameters like security +# strength, capability, personalization string using one of the +# getInstance(...,SecureRandomParameters,...) methods with a +# DrbgParameters.Instantiation argument, but other settings such as the +# mechanism and DRBG algorithm names are not currently configurable by any API. +# +# Please note that the SUN implementation of DRBG always supports reseeding. +# +# The value of this property is a comma-separated list of all configurable +# aspects. The aspects can appear in any order but the same aspect can only +# appear at most once. Its BNF-style definition is: +# +# Value: +# aspect { "," aspect } +# +# aspect: +# mech_name | algorithm_name | strength | capability | df +# +# // The DRBG mechanism to use. Default "Hash_DRBG" +# mech_name: +# "Hash_DRBG" | "HMAC_DRBG" | "CTR_DRBG" +# +# // The DRBG algorithm name. The "SHA-***" names are for Hash_DRBG and +# // HMAC_DRBG, default "SHA-256". The "AES-***" names are for CTR_DRBG, +# // default "AES-128" when using the limited cryptographic or "AES-256" +# // when using the unlimited. +# algorithm_name: +# "SHA-224" | "SHA-512/224" | "SHA-256" | +# "SHA-512/256" | "SHA-384" | "SHA-512" | +# "AES-128" | "AES-192" | "AES-256" +# +# // Security strength requested. Default "128" +# strength: +# "112" | "128" | "192" | "256" +# +# // Prediction resistance and reseeding request. Default "none" +# // "pr_and_reseed" - Both prediction resistance and reseeding +# // support requested +# // "reseed_only" - Only reseeding support requested +# // "none" - Neither prediction resistance not reseeding +# // support requested +# pr: +# "pr_and_reseed" | "reseed_only" | "none" +# +# // Whether a derivation function should be used. only applicable +# // to CTR_DRBG. Default "use_df" +# df: +# "use_df" | "no_df" +# +# Examples, +# securerandom.drbg.config=Hash_DRBG,SHA-224,112,none +# securerandom.drbg.config=CTR_DRBG,AES-256,192,pr_and_reseed,use_df +# +# The default value is an empty string, which is equivalent to +# securerandom.drbg.config=Hash_DRBG,SHA-256,128,none +# +securerandom.drbg.config= + +# +# Class to instantiate as the javax.security.auth.login.Configuration +# provider. +# +login.configuration.provider=sun.security.provider.ConfigFile + +# +# Default login configuration file +# +#login.config.url.1=file:${user.home}/.java.login.config + +# +# Class to instantiate as the system Policy. This is the name of the class +# that will be used as the Policy object. The system class loader is used to +# locate this class. +# +policy.provider=sun.security.provider.PolicyFile + +# The default is to have a single system-wide policy file, +# and a policy file in the user's home directory. +# +policy.url.1=file:${java.home}/conf/security/java.policy +policy.url.2=file:${user.home}/.java.policy + +# whether or not we expand properties in the policy file +# if this is set to false, properties (${...}) will not be expanded in policy +# files. +# +policy.expandProperties=true + +# whether or not we allow an extra policy to be passed on the command line +# with -Djava.security.policy=somefile. Comment out this line to disable +# this feature. +# +policy.allowSystemProperty=true + +# whether or not we look into the IdentityScope for trusted Identities +# when encountering a 1.1 signed JAR file. If the identity is found +# and is trusted, we grant it AllPermission. Note: the default policy +# provider (sun.security.provider.PolicyFile) does not support this property. +# +policy.ignoreIdentityScope=false + +# +# Default keystore type. +# +keystore.type=pkcs12 + +# +# Controls compatibility mode for JKS and PKCS12 keystore types. +# +# When set to 'true', both JKS and PKCS12 keystore types support loading +# keystore files in either JKS or PKCS12 format. When set to 'false' the +# JKS keystore type supports loading only JKS keystore files and the PKCS12 +# keystore type supports loading only PKCS12 keystore files. +# +keystore.type.compat=true + +# +# List of comma-separated packages that start with or equal this string +# will cause a security exception to be thrown when passed to the +# SecurityManager::checkPackageAccess method unless the corresponding +# RuntimePermission("accessClassInPackage."+package) has been granted. +# +package.access=sun.misc.,\ + sun.reflect. + +# +# List of comma-separated packages that start with or equal this string +# will cause a security exception to be thrown when passed to the +# SecurityManager::checkPackageDefinition method unless the corresponding +# RuntimePermission("defineClassInPackage."+package) has been granted. +# +# By default, none of the class loaders supplied with the JDK call +# checkPackageDefinition. +# +package.definition=sun.misc.,\ + sun.reflect. + +# +# Determines whether this properties file can be appended to +# or overridden on the command line via -Djava.security.properties +# +security.overridePropertiesFile=true + +# +# Determines the default key and trust manager factory algorithms for +# the javax.net.ssl package. +# +ssl.KeyManagerFactory.algorithm=SunX509 +ssl.TrustManagerFactory.algorithm=PKIX + +# +# The Java-level namelookup cache policy for successful lookups: +# +# any negative value: caching forever +# any positive value: the number of seconds to cache an address for +# zero: do not cache +# +# default value is forever (FOREVER). For security reasons, this +# caching is made forever when a security manager is set. When a security +# manager is not set, the default behavior in this implementation +# is to cache for 30 seconds. +# +# NOTE: setting this to anything other than the default value can have +# serious security implications. Do not set it unless +# you are sure you are not exposed to DNS spoofing attack. +# +#networkaddress.cache.ttl=-1 + +# The Java-level namelookup cache policy for failed lookups: +# +# any negative value: cache forever +# any positive value: the number of seconds to cache negative lookup results +# zero: do not cache +# +# In some Microsoft Windows networking environments that employ +# the WINS name service in addition to DNS, name service lookups +# that fail may take a noticeably long time to return (approx. 5 seconds). +# For this reason the default caching policy is to maintain these +# results for 10 seconds. +# +networkaddress.cache.negative.ttl=10 + +# +# Properties to configure OCSP for certificate revocation checking +# + +# Enable OCSP +# +# By default, OCSP is not used for certificate revocation checking. +# This property enables the use of OCSP when set to the value "true". +# +# NOTE: SocketPermission is required to connect to an OCSP responder. +# +# Example, +# ocsp.enable=true + +# +# Location of the OCSP responder +# +# By default, the location of the OCSP responder is determined implicitly +# from the certificate being validated. This property explicitly specifies +# the location of the OCSP responder. The property is used when the +# Authority Information Access extension (defined in RFC 5280) is absent +# from the certificate or when it requires overriding. +# +# Example, +# ocsp.responderURL=http://ocsp.example.net:80 + +# +# Subject name of the OCSP responder's certificate +# +# By default, the certificate of the OCSP responder is that of the issuer +# of the certificate being validated. This property identifies the certificate +# of the OCSP responder when the default does not apply. Its value is a string +# distinguished name (defined in RFC 2253) which identifies a certificate in +# the set of certificates supplied during cert path validation. In cases where +# the subject name alone is not sufficient to uniquely identify the certificate +# then both the "ocsp.responderCertIssuerName" and +# "ocsp.responderCertSerialNumber" properties must be used instead. When this +# property is set then those two properties are ignored. +# +# Example, +# ocsp.responderCertSubjectName=CN=OCSP Responder, O=XYZ Corp + +# +# Issuer name of the OCSP responder's certificate +# +# By default, the certificate of the OCSP responder is that of the issuer +# of the certificate being validated. This property identifies the certificate +# of the OCSP responder when the default does not apply. Its value is a string +# distinguished name (defined in RFC 2253) which identifies a certificate in +# the set of certificates supplied during cert path validation. When this +# property is set then the "ocsp.responderCertSerialNumber" property must also +# be set. When the "ocsp.responderCertSubjectName" property is set then this +# property is ignored. +# +# Example, +# ocsp.responderCertIssuerName=CN=Enterprise CA, O=XYZ Corp + +# +# Serial number of the OCSP responder's certificate +# +# By default, the certificate of the OCSP responder is that of the issuer +# of the certificate being validated. This property identifies the certificate +# of the OCSP responder when the default does not apply. Its value is a string +# of hexadecimal digits (colon or space separators may be present) which +# identifies a certificate in the set of certificates supplied during cert path +# validation. When this property is set then the "ocsp.responderCertIssuerName" +# property must also be set. When the "ocsp.responderCertSubjectName" property +# is set then this property is ignored. +# +# Example, +# ocsp.responderCertSerialNumber=2A:FF:00 + +# +# Policy for failed Kerberos KDC lookups: +# +# When a KDC is unavailable (network error, service failure, etc), it is +# put inside a blacklist and accessed less often for future requests. The +# value (case-insensitive) for this policy can be: +# +# tryLast +# KDCs in the blacklist are always tried after those not on the list. +# +# tryLess[:max_retries,timeout] +# KDCs in the blacklist are still tried by their order in the configuration, +# but with smaller max_retries and timeout values. max_retries and timeout +# are optional numerical parameters (default 1 and 5000, which means once +# and 5 seconds). Please notes that if any of the values defined here is +# more than what is defined in krb5.conf, it will be ignored. +# +# Whenever a KDC is detected as available, it is removed from the blacklist. +# The blacklist is reset when krb5.conf is reloaded. You can add +# refreshKrb5Config=true to a JAAS configuration file so that krb5.conf is +# reloaded whenever a JAAS authentication is attempted. +# +# Example, +# krb5.kdc.bad.policy = tryLast +# krb5.kdc.bad.policy = tryLess:2,2000 +# +krb5.kdc.bad.policy = tryLast + +# +# Algorithm restrictions for certification path (CertPath) processing +# +# In some environments, certain algorithms or key lengths may be undesirable +# for certification path building and validation. For example, "MD2" is +# generally no longer considered to be a secure hash algorithm. This section +# describes the mechanism for disabling algorithms based on algorithm name +# and/or key length. This includes algorithms used in certificates, as well +# as revocation information such as CRLs and signed OCSP Responses. +# The syntax of the disabled algorithm string is described as follows: +# DisabledAlgorithms: +# " DisabledAlgorithm { , DisabledAlgorithm } " +# +# DisabledAlgorithm: +# AlgorithmName [Constraint] { '&' Constraint } +# +# AlgorithmName: +# (see below) +# +# Constraint: +# KeySizeConstraint | CAConstraint | DenyAfterConstraint | +# UsageConstraint +# +# KeySizeConstraint: +# keySize Operator KeyLength +# +# Operator: +# <= | < | == | != | >= | > +# +# KeyLength: +# Integer value of the algorithm's key length in bits +# +# CAConstraint: +# jdkCA +# +# DenyAfterConstraint: +# denyAfter YYYY-MM-DD +# +# UsageConstraint: +# usage [TLSServer] [TLSClient] [SignedJAR] +# +# The "AlgorithmName" is the standard algorithm name of the disabled +# algorithm. See "Java Cryptography Architecture Standard Algorithm Name +# Documentation" for information about Standard Algorithm Names. Matching +# is performed using a case-insensitive sub-element matching rule. (For +# example, in "SHA1withECDSA" the sub-elements are "SHA1" for hashing and +# "ECDSA" for signatures.) If the assertion "AlgorithmName" is a +# sub-element of the certificate algorithm name, the algorithm will be +# rejected during certification path building and validation. For example, +# the assertion algorithm name "DSA" will disable all certificate algorithms +# that rely on DSA, such as NONEwithDSA, SHA1withDSA. However, the assertion +# will not disable algorithms related to "ECDSA". +# +# A "Constraint" defines restrictions on the keys and/or certificates for +# a specified AlgorithmName: +# +# KeySizeConstraint: +# keySize Operator KeyLength +# The constraint requires a key of a valid size range if the +# "AlgorithmName" is of a key algorithm. The "KeyLength" indicates +# the key size specified in number of bits. For example, +# "RSA keySize <= 1024" indicates that any RSA key with key size less +# than or equal to 1024 bits should be disabled, and +# "RSA keySize < 1024, RSA keySize > 2048" indicates that any RSA key +# with key size less than 1024 or greater than 2048 should be disabled. +# This constraint is only used on algorithms that have a key size. +# +# CAConstraint: +# jdkCA +# This constraint prohibits the specified algorithm only if the +# algorithm is used in a certificate chain that terminates at a marked +# trust anchor in the lib/security/cacerts keystore. If the jdkCA +# constraint is not set, then all chains using the specified algorithm +# are restricted. jdkCA may only be used once in a DisabledAlgorithm +# expression. +# Example: To apply this constraint to SHA-1 certificates, include +# the following: "SHA1 jdkCA" +# +# DenyAfterConstraint: +# denyAfter YYYY-MM-DD +# This constraint prohibits a certificate with the specified algorithm +# from being used after the date regardless of the certificate's +# validity. JAR files that are signed and timestamped before the +# constraint date with certificates containing the disabled algorithm +# will not be restricted. The date is processed in the UTC timezone. +# This constraint can only be used once in a DisabledAlgorithm +# expression. +# Example: To deny usage of RSA 2048 bit certificates after Feb 3 2020, +# use the following: "RSA keySize == 2048 & denyAfter 2020-02-03" +# +# UsageConstraint: +# usage [TLSServer] [TLSClient] [SignedJAR] +# This constraint prohibits the specified algorithm for +# a specified usage. This should be used when disabling an algorithm +# for all usages is not practical. 'TLSServer' restricts the algorithm +# in TLS server certificate chains when server authentication is +# performed. 'TLSClient' restricts the algorithm in TLS client +# certificate chains when client authentication is performed. +# 'SignedJAR' constrains use of certificates in signed jar files. +# The usage type follows the keyword and more than one usage type can +# be specified with a whitespace delimiter. +# Example: "SHA1 usage TLSServer TLSClient" +# +# When an algorithm must satisfy more than one constraint, it must be +# delimited by an ampersand '&'. For example, to restrict certificates in a +# chain that terminate at a distribution provided trust anchor and contain +# RSA keys that are less than or equal to 1024 bits, add the following +# constraint: "RSA keySize <= 1024 & jdkCA". +# +# All DisabledAlgorithms expressions are processed in the order defined in the +# property. This requires lower keysize constraints to be specified +# before larger keysize constraints of the same algorithm. For example: +# "RSA keySize < 1024 & jdkCA, RSA keySize < 2048". +# +# Note: The algorithm restrictions do not apply to trust anchors or +# self-signed certificates. +# +# Note: This property is currently used by Oracle's PKIX implementation. It +# is not guaranteed to be examined and used by other implementations. +# +# Example: +# jdk.certpath.disabledAlgorithms=MD2, DSA, RSA keySize < 2048 +# +# +jdk.certpath.disabledAlgorithms=MD2, MD5, SHA1 jdkCA & usage TLSServer, \ + RSA keySize < 1024, DSA keySize < 1024, EC keySize < 224 + +# +# Algorithm restrictions for signed JAR files +# +# In some environments, certain algorithms or key lengths may be undesirable +# for signed JAR validation. For example, "MD2" is generally no longer +# considered to be a secure hash algorithm. This section describes the +# mechanism for disabling algorithms based on algorithm name and/or key length. +# JARs signed with any of the disabled algorithms or key sizes will be treated +# as unsigned. +# +# The syntax of the disabled algorithm string is described as follows: +# DisabledAlgorithms: +# " DisabledAlgorithm { , DisabledAlgorithm } " +# +# DisabledAlgorithm: +# AlgorithmName [Constraint] { '&' Constraint } +# +# AlgorithmName: +# (see below) +# +# Constraint: +# KeySizeConstraint | DenyAfterConstraint +# +# KeySizeConstraint: +# keySize Operator KeyLength +# +# DenyAfterConstraint: +# denyAfter YYYY-MM-DD +# +# Operator: +# <= | < | == | != | >= | > +# +# KeyLength: +# Integer value of the algorithm's key length in bits +# +# Note: This property is currently used by the JDK Reference +# implementation. It is not guaranteed to be examined and used by other +# implementations. +# +# See "jdk.certpath.disabledAlgorithms" for syntax descriptions. +# +jdk.jar.disabledAlgorithms=MD2, MD5, RSA keySize < 1024, \ + DSA keySize < 1024 + +# +# Algorithm restrictions for Secure Socket Layer/Transport Layer Security +# (SSL/TLS/DTLS) processing +# +# In some environments, certain algorithms or key lengths may be undesirable +# when using SSL/TLS/DTLS. This section describes the mechanism for disabling +# algorithms during SSL/TLS/DTLS security parameters negotiation, including +# protocol version negotiation, cipher suites selection, peer authentication +# and key exchange mechanisms. +# +# Disabled algorithms will not be negotiated for SSL/TLS connections, even +# if they are enabled explicitly in an application. +# +# For PKI-based peer authentication and key exchange mechanisms, this list +# of disabled algorithms will also be checked during certification path +# building and validation, including algorithms used in certificates, as +# well as revocation information such as CRLs and signed OCSP Responses. +# This is in addition to the jdk.certpath.disabledAlgorithms property above. +# +# See the specification of "jdk.certpath.disabledAlgorithms" for the +# syntax of the disabled algorithm string. +# +# Note: The algorithm restrictions do not apply to trust anchors or +# self-signed certificates. +# +# Note: This property is currently used by the JDK Reference implementation. +# It is not guaranteed to be examined and used by other implementations. +# +# Example: +# jdk.tls.disabledAlgorithms=MD5, SSLv3, DSA, RSA keySize < 2048 +jdk.tls.disabledAlgorithms=SSLv3, RC4, MD5withRSA, DH keySize < 1024, \ + EC keySize < 224, DES40_CBC, RC4_40, 3DES_EDE_CBC + +# +# Legacy algorithms for Secure Socket Layer/Transport Layer Security (SSL/TLS) +# processing in JSSE implementation. +# +# In some environments, a certain algorithm may be undesirable but it +# cannot be disabled because of its use in legacy applications. Legacy +# algorithms may still be supported, but applications should not use them +# as the security strength of legacy algorithms are usually not strong enough +# in practice. +# +# During SSL/TLS security parameters negotiation, legacy algorithms will +# not be negotiated unless there are no other candidates. +# +# The syntax of the legacy algorithms string is described as this Java +# BNF-style: +# LegacyAlgorithms: +# " LegacyAlgorithm { , LegacyAlgorithm } " +# +# LegacyAlgorithm: +# AlgorithmName (standard JSSE algorithm name) +# +# See the specification of security property "jdk.certpath.disabledAlgorithms" +# for the syntax and description of the "AlgorithmName" notation. +# +# Per SSL/TLS specifications, cipher suites have the form: +# SSL_KeyExchangeAlg_WITH_CipherAlg_MacAlg +# or +# TLS_KeyExchangeAlg_WITH_CipherAlg_MacAlg +# +# For example, the cipher suite TLS_RSA_WITH_AES_128_CBC_SHA uses RSA as the +# key exchange algorithm, AES_128_CBC (128 bits AES cipher algorithm in CBC +# mode) as the cipher (encryption) algorithm, and SHA-1 as the message digest +# algorithm for HMAC. +# +# The LegacyAlgorithm can be one of the following standard algorithm names: +# 1. JSSE cipher suite name, e.g., TLS_RSA_WITH_AES_128_CBC_SHA +# 2. JSSE key exchange algorithm name, e.g., RSA +# 3. JSSE cipher (encryption) algorithm name, e.g., AES_128_CBC +# 4. JSSE message digest algorithm name, e.g., SHA +# +# See SSL/TLS specifications and "Java Cryptography Architecture Standard +# Algorithm Name Documentation" for information about the algorithm names. +# +# Note: If a legacy algorithm is also restricted through the +# jdk.tls.disabledAlgorithms property or the +# java.security.AlgorithmConstraints API (See +# javax.net.ssl.SSLParameters.setAlgorithmConstraints()), +# then the algorithm is completely disabled and will not be negotiated. +# +# Note: This property is currently used by the JDK Reference implementation. +# It is not guaranteed to be examined and used by other implementations. +# There is no guarantee the property will continue to exist or be of the +# same syntax in future releases. +# +# Example: +# jdk.tls.legacyAlgorithms=DH_anon, DES_CBC, SSL_RSA_WITH_RC4_128_MD5 +# +jdk.tls.legacyAlgorithms= \ + K_NULL, C_NULL, M_NULL, \ + DH_anon, ECDH_anon, \ + RC4_128, RC4_40, DES_CBC, DES40_CBC, \ + 3DES_EDE_CBC + +# +# The pre-defined default finite field Diffie-Hellman ephemeral (DHE) +# parameters for Transport Layer Security (SSL/TLS/DTLS) processing. +# +# In traditional SSL/TLS/DTLS connections where finite field DHE parameters +# negotiation mechanism is not used, the server offers the client group +# parameters, base generator g and prime modulus p, for DHE key exchange. +# It is recommended to use dynamic group parameters. This property defines +# a mechanism that allows you to specify custom group parameters. +# +# The syntax of this property string is described as this Java BNF-style: +# DefaultDHEParameters: +# DefinedDHEParameters { , DefinedDHEParameters } +# +# DefinedDHEParameters: +# "{" DHEPrimeModulus , DHEBaseGenerator "}" +# +# DHEPrimeModulus: +# HexadecimalDigits +# +# DHEBaseGenerator: +# HexadecimalDigits +# +# HexadecimalDigits: +# HexadecimalDigit { HexadecimalDigit } +# +# HexadecimalDigit: one of +# 0 1 2 3 4 5 6 7 8 9 A B C D E F a b c d e f +# +# Whitespace characters are ignored. +# +# The "DefinedDHEParameters" defines the custom group parameters, prime +# modulus p and base generator g, for a particular size of prime modulus p. +# The "DHEPrimeModulus" defines the hexadecimal prime modulus p, and the +# "DHEBaseGenerator" defines the hexadecimal base generator g of a group +# parameter. It is recommended to use safe primes for the custom group +# parameters. +# +# If this property is not defined or the value is empty, the underlying JSSE +# provider's default group parameter is used for each connection. +# +# If the property value does not follow the grammar, or a particular group +# parameter is not valid, the connection will fall back and use the +# underlying JSSE provider's default group parameter. +# +# Note: This property is currently used by OpenJDK's JSSE implementation. It +# is not guaranteed to be examined and used by other implementations. +# +# Example: +# jdk.tls.server.defaultDHEParameters= +# { \ +# FFFFFFFF FFFFFFFF C90FDAA2 2168C234 C4C6628B 80DC1CD1 \ +# 29024E08 8A67CC74 020BBEA6 3B139B22 514A0879 8E3404DD \ +# EF9519B3 CD3A431B 302B0A6D F25F1437 4FE1356D 6D51C245 \ +# E485B576 625E7EC6 F44C42E9 A637ED6B 0BFF5CB6 F406B7ED \ +# EE386BFB 5A899FA5 AE9F2411 7C4B1FE6 49286651 ECE65381 \ +# FFFFFFFF FFFFFFFF, 2} + +# +# TLS key limits on symmetric cryptographic algorithms +# +# This security property sets limits on algorithms key usage in TLS 1.3. +# When the amount of data encrypted exceeds the algorithm value listed below, +# a KeyUpdate message will trigger a key change. This is for symmetric ciphers +# with TLS 1.3 only. +# +# The syntax for the property is described below: +# KeyLimits: +# " KeyLimit { , KeyLimit } " +# +# WeakKeyLimit: +# AlgorithmName Action Length +# +# AlgorithmName: +# A full algorithm transformation. +# +# Action: +# KeyUpdate +# +# Length: +# The amount of encrypted data in a session before the Action occurs +# This value may be an integer value in bytes, or as a power of two, 2^29. +# +# KeyUpdate: +# The TLS 1.3 KeyUpdate handshake process begins when the Length amount +# is fulfilled. +# +# Note: This property is currently used by OpenJDK's JSSE implementation. It +# is not guaranteed to be examined and used by other implementations. +# +jdk.tls.keyLimits=AES/GCM/NoPadding KeyUpdate 2^37 + +# +# Cryptographic Jurisdiction Policy defaults +# +# Import and export control rules on cryptographic software vary from +# country to country. By default, Java provides two different sets of +# cryptographic policy files[1]: +# +# unlimited: These policy files contain no restrictions on cryptographic +# strengths or algorithms +# +# limited: These policy files contain more restricted cryptographic +# strengths +# +# The default setting is determined by the value of the "crypto.policy" +# Security property below. If your country or usage requires the +# traditional restrictive policy, the "limited" Java cryptographic +# policy is still available and may be appropriate for your environment. +# +# If you have restrictions that do not fit either use case mentioned +# above, Java provides the capability to customize these policy files. +# The "crypto.policy" security property points to a subdirectory +# within /conf/security/policy/ which can be customized. +# Please see the /conf/security/policy/README.txt file or consult +# the Java Security Guide/JCA documentation for more information. +# +# YOU ARE ADVISED TO CONSULT YOUR EXPORT/IMPORT CONTROL COUNSEL OR ATTORNEY +# TO DETERMINE THE EXACT REQUIREMENTS. +# +# [1] Please note that the JCE for Java SE, including the JCE framework, +# cryptographic policy files, and standard JCE providers provided with +# the Java SE, have been reviewed and approved for export as mass market +# encryption item by the US Bureau of Industry and Security. +# +# Note: This property is currently used by the JDK Reference implementation. +# It is not guaranteed to be examined and used by other implementations. +# +crypto.policy=unlimited + +# +# The policy for the XML Signature secure validation mode. The mode is +# enabled by setting the property "org.jcp.xml.dsig.secureValidation" to +# true with the javax.xml.crypto.XMLCryptoContext.setProperty() method, +# or by running the code with a SecurityManager. +# +# Policy: +# Constraint {"," Constraint } +# Constraint: +# AlgConstraint | MaxTransformsConstraint | MaxReferencesConstraint | +# ReferenceUriSchemeConstraint | KeySizeConstraint | OtherConstraint +# AlgConstraint +# "disallowAlg" Uri +# MaxTransformsConstraint: +# "maxTransforms" Integer +# MaxReferencesConstraint: +# "maxReferences" Integer +# ReferenceUriSchemeConstraint: +# "disallowReferenceUriSchemes" String { String } +# KeySizeConstraint: +# "minKeySize" KeyAlg Integer +# OtherConstraint: +# "noDuplicateIds" | "noRetrievalMethodLoops" +# +# For AlgConstraint, Uri is the algorithm URI String that is not allowed. +# See the XML Signature Recommendation for more information on algorithm +# URI Identifiers. For KeySizeConstraint, KeyAlg is the standard algorithm +# name of the key type (ex: "RSA"). If the MaxTransformsConstraint, +# MaxReferencesConstraint or KeySizeConstraint (for the same key type) is +# specified more than once, only the last entry is enforced. +# +# Note: This property is currently used by the JDK Reference implementation. It +# is not guaranteed to be examined and used by other implementations. +# +jdk.xml.dsig.secureValidationPolicy=\ + disallowAlg http://www.w3.org/TR/1999/REC-xslt-19991116,\ + disallowAlg http://www.w3.org/2001/04/xmldsig-more#rsa-md5,\ + disallowAlg http://www.w3.org/2001/04/xmldsig-more#hmac-md5,\ + disallowAlg http://www.w3.org/2001/04/xmldsig-more#md5,\ + maxTransforms 5,\ + maxReferences 30,\ + disallowReferenceUriSchemes file http https,\ + minKeySize RSA 1024,\ + minKeySize DSA 1024,\ + minKeySize EC 224,\ + noDuplicateIds,\ + noRetrievalMethodLoops + +# +# Serialization process-wide filter +# +# A filter, if configured, is used by java.io.ObjectInputStream during +# deserialization to check the contents of the stream. +# A filter is configured as a sequence of patterns, each pattern is either +# matched against the name of a class in the stream or defines a limit. +# Patterns are separated by ";" (semicolon). +# Whitespace is significant and is considered part of the pattern. +# +# If the system property jdk.serialFilter is also specified, it supersedes +# the security property value defined here. +# +# If a pattern includes a "=", it sets a limit. +# If a limit appears more than once the last value is used. +# Limits are checked before classes regardless of the order in the +# sequence of patterns. +# If any of the limits are exceeded, the filter status is REJECTED. +# +# maxdepth=value - the maximum depth of a graph +# maxrefs=value - the maximum number of internal references +# maxbytes=value - the maximum number of bytes in the input stream +# maxarray=value - the maximum array length allowed +# +# Other patterns, from left to right, match the class or package name as +# returned from Class.getName. +# If the class is an array type, the class or package to be matched is the +# element type. +# Arrays of any number of dimensions are treated the same as the element type. +# For example, a pattern of "!example.Foo", rejects creation of any instance or +# array of example.Foo. +# +# If the pattern starts with "!", the status is REJECTED if the remaining +# pattern is matched; otherwise the status is ALLOWED if the pattern matches. +# If the pattern contains "/", the non-empty prefix up to the "/" is the +# module name; +# if the module name matches the module name of the class then +# the remaining pattern is matched with the class name. +# If there is no "/", the module name is not compared. +# If the pattern ends with ".**" it matches any class in the package and all +# subpackages. +# If the pattern ends with ".*" it matches any class in the package. +# If the pattern ends with "*", it matches any class with the pattern as a +# prefix. +# If the pattern is equal to the class name, it matches. +# Otherwise, the status is UNDECIDED. +# +#jdk.serialFilter=pattern;pattern + +# +# RMI Registry Serial Filter +# +# The filter pattern uses the same format as jdk.serialFilter. +# This filter can override the builtin filter if additional types need to be +# allowed or rejected from the RMI Registry or to decrease limits but not +# to increase limits. +# If the limits (maxdepth, maxrefs, or maxbytes) are exceeded, the object is rejected. +# +# Each non-array type is allowed or rejected if it matches one of the patterns, +# evaluated from left to right, and is otherwise allowed. Arrays of any +# component type, including subarrays and arrays of primitives, are allowed. +# +# Array construction of any component type, including subarrays and arrays of +# primitives, are allowed unless the length is greater than the maxarray limit. +# The filter is applied to each array element. +# +# Note: This property is currently used by the JDK Reference implementation. +# It is not guaranteed to be examined and used by other implementations. +# +# The built-in filter allows subclasses of allowed classes and +# can approximately be represented as the pattern: +# +#sun.rmi.registry.registryFilter=\ +# maxarray=1000000;\ +# maxdepth=20;\ +# java.lang.String;\ +# java.lang.Number;\ +# java.lang.reflect.Proxy;\ +# java.rmi.Remote;\ +# sun.rmi.server.UnicastRef;\ +# sun.rmi.server.RMIClientSocketFactory;\ +# sun.rmi.server.RMIServerSocketFactory;\ +# java.rmi.activation.ActivationID;\ +# java.rmi.server.UID +# +# RMI Distributed Garbage Collector (DGC) Serial Filter +# +# The filter pattern uses the same format as jdk.serialFilter. +# This filter can override the builtin filter if additional types need to be +# allowed or rejected from the RMI DGC. +# +# Note: This property is currently used by the JDK Reference implementation. +# It is not guaranteed to be examined and used by other implementations. +# +# The builtin DGC filter can approximately be represented as the filter pattern: +# +#sun.rmi.transport.dgcFilter=\ +# java.rmi.server.ObjID;\ +# java.rmi.server.UID;\ +# java.rmi.dgc.VMID;\ +# java.rmi.dgc.Lease;\ +# maxdepth=5;maxarray=10000 + +# CORBA ORBIorTypeCheckRegistryFilter +# Type check enhancement for ORB::string_to_object processing +# +# An IOR type check filter, if configured, is used by an ORB during +# an ORB::string_to_object invocation to check the veracity of the type encoded +# in the ior string. +# +# The filter pattern consists of a semi-colon separated list of class names. +# The configured list contains the binary class names of the IDL interface types +# corresponding to the IDL stub class to be instantiated. +# As such, a filter specifies a list of IDL stub classes that will be +# allowed by an ORB when an ORB::string_to_object is invoked. +# It is used to specify a white list configuration of acceptable +# IDL stub types which may be contained in a stringified IOR +# parameter passed as input to an ORB::string_to_object method. +# +# Note: This property is currently used by the JDK Reference implementation. +# It is not guaranteed to be examined and used by other implementations. +# +#com.sun.CORBA.ORBIorTypeCheckRegistryFilter=binary_class_name;binary_class_name + +# +# JCEKS Encrypted Key Serial Filter +# +# This filter, if configured, is used by the JCEKS KeyStore during the +# deserialization of the encrypted Key object stored inside a key entry. +# If not configured or the filter result is UNDECIDED (i.e. none of the patterns +# matches), the filter configured by jdk.serialFilter will be consulted. +# +# If the system property jceks.key.serialFilter is also specified, it supersedes +# the security property value defined here. +# +# The filter pattern uses the same format as jdk.serialFilter. The default +# pattern allows java.lang.Enum, java.security.KeyRep, java.security.KeyRep$Type, +# and javax.crypto.spec.SecretKeySpec and rejects all the others. +jceks.key.serialFilter = java.base/java.lang.Enum;java.base/java.security.KeyRep;\ + java.base/java.security.KeyRep$Type;java.base/javax.crypto.spec.SecretKeySpec;!* + +# +# Enhanced exception message information +# +# By default, exception messages should not include potentially sensitive +# information such as file names, host names, or port numbers. This property +# accepts one or more comma separated values, each of which represents a +# category of enhanced exception message information to enable. Values are +# case-insensitive. Leading and trailing whitespaces, surrounding each value, +# are ignored. Unknown values are ignored. +# +# NOTE: Use caution before setting this property. Setting this property +# exposes sensitive information in Exceptions, which could, for example, +# propagate to untrusted code or be emitted in stack traces that are +# inadvertently disclosed and made accessible over a public network. +# +# The categories are: +# +# hostInfo - IOExceptions thrown by java.net.Socket and the socket types in the +# java.nio.channels package will contain enhanced exception +# message information +# +# The property setting in this file can be overridden by a system property of +# the same name, with the same syntax and possible values. +# +#jdk.includeInExceptions=hostInfo diff --git a/jalview_java/conf/security/policy/README.txt b/jalview_java/conf/security/policy/README.txt new file mode 100644 index 0000000..fdf77d3 --- /dev/null +++ b/jalview_java/conf/security/policy/README.txt @@ -0,0 +1,54 @@ + + Java(TM) Cryptography Extension Policy Files + for the Java(TM) Platform, Standard Edition Runtime Environment + + README +------------------------------------------------------------------------ + +Import and export control rules on cryptographic software vary from +country to country. The Java Cryptography Extension (JCE) architecture +allows flexible cryptographic key strength to be configured via the +jurisdiction policy files which are referenced by the "crypto.policy" +security property in the /conf/security/java.security file. + +By default, Java provides two different sets of cryptographic policy +files: + + unlimited: These policy files contain no restrictions on cryptographic + strengths or algorithms + + limited: These policy files contain more restricted cryptographic + strengths + +These files reside in /conf/security/policy in the "unlimited" +or "limited" subdirectories respectively. + +Each subdirectory contains a complete policy configuration, +and subdirectories can be added/edited/removed to reflect your +import or export control product requirements. + +Within a subdirectory, the effective policy is the combined minimum +permissions of the grant statements in the file(s) matching the filename +pattern "default_*.policy". At least one grant is required. For example: + + limited = Export (all) + Import (limited) = Limited + unlimited = Export (all) + Import (all) = Unlimited + +The effective exemption policy is the combined minimum permissions +of the grant statements in the file(s) matching the filename pattern +"exempt_*.policy". Exemption grants are optional. For example: + + limited = grants exemption permissions, by which the + effective policy can be circumvented. + e.g. KeyRecovery/KeyEscrow/KeyWeakening. + +Please see the Java Cryptography Architecture (JCA) documentation for +additional information on these files and formats. + +YOU ARE ADVISED TO CONSULT YOUR EXPORT/IMPORT CONTROL COUNSEL OR ATTORNEY +TO DETERMINE THE EXACT REQUIREMENTS. + +Please note that the JCE for Java SE, including the JCE framework, +cryptographic policy files, and standard JCE providers provided with +the Java SE, have been reviewed and approved for export as mass market +encryption item by the US Bureau of Industry and Security. diff --git a/jalview_java/conf/security/policy/limited/default_US_export.policy b/jalview_java/conf/security/policy/limited/default_US_export.policy new file mode 100644 index 0000000..1f38934 --- /dev/null +++ b/jalview_java/conf/security/policy/limited/default_US_export.policy @@ -0,0 +1,6 @@ +// Default US Export policy file. + +grant { + // There is no restriction to any algorithms. + permission javax.crypto.CryptoAllPermission; +}; diff --git a/jalview_java/conf/security/policy/limited/default_local.policy b/jalview_java/conf/security/policy/limited/default_local.policy new file mode 100644 index 0000000..2a6d513 --- /dev/null +++ b/jalview_java/conf/security/policy/limited/default_local.policy @@ -0,0 +1,14 @@ +// Some countries have import limits on crypto strength. This policy file +// is worldwide importable. + +grant { + permission javax.crypto.CryptoPermission "DES", 64; + permission javax.crypto.CryptoPermission "DESede", *; + permission javax.crypto.CryptoPermission "RC2", 128, + "javax.crypto.spec.RC2ParameterSpec", 128; + permission javax.crypto.CryptoPermission "RC4", 128; + permission javax.crypto.CryptoPermission "RC5", 128, + "javax.crypto.spec.RC5ParameterSpec", *, 12, *; + permission javax.crypto.CryptoPermission "RSA", *; + permission javax.crypto.CryptoPermission *, 128; +}; diff --git a/jalview_java/conf/security/policy/limited/exempt_local.policy b/jalview_java/conf/security/policy/limited/exempt_local.policy new file mode 100644 index 0000000..9dd5b91 --- /dev/null +++ b/jalview_java/conf/security/policy/limited/exempt_local.policy @@ -0,0 +1,13 @@ +// Some countries have import limits on crypto strength, but may allow for +// these exemptions if the exemption mechanism is used. + +grant { + // There is no restriction to any algorithms if KeyRecovery is enforced. + permission javax.crypto.CryptoPermission *, "KeyRecovery"; + + // There is no restriction to any algorithms if KeyEscrow is enforced. + permission javax.crypto.CryptoPermission *, "KeyEscrow"; + + // There is no restriction to any algorithms if KeyWeakening is enforced. + permission javax.crypto.CryptoPermission *, "KeyWeakening"; +}; diff --git a/jalview_java/conf/security/policy/unlimited/default_US_export.policy b/jalview_java/conf/security/policy/unlimited/default_US_export.policy new file mode 100644 index 0000000..1f38934 --- /dev/null +++ b/jalview_java/conf/security/policy/unlimited/default_US_export.policy @@ -0,0 +1,6 @@ +// Default US Export policy file. + +grant { + // There is no restriction to any algorithms. + permission javax.crypto.CryptoAllPermission; +}; diff --git a/jalview_java/conf/security/policy/unlimited/default_local.policy b/jalview_java/conf/security/policy/unlimited/default_local.policy new file mode 100644 index 0000000..2b907e2 --- /dev/null +++ b/jalview_java/conf/security/policy/unlimited/default_local.policy @@ -0,0 +1,6 @@ +// Country-specific policy file for countries with no limits on crypto strength. + +grant { + // There is no restriction to any algorithms. + permission javax.crypto.CryptoAllPermission; +}; diff --git a/jalview_java/conf/sound.properties b/jalview_java/conf/sound.properties new file mode 100644 index 0000000..68309d1 --- /dev/null +++ b/jalview_java/conf/sound.properties @@ -0,0 +1,39 @@ +############################################################ +# Sound Configuration File +############################################################ +# +# This properties file is used to specify default service +# providers for javax.sound.midi.MidiSystem and +# javax.sound.sampled.AudioSystem. +# +# The following keys are recognized by MidiSystem methods: +# +# javax.sound.midi.Receiver +# javax.sound.midi.Sequencer +# javax.sound.midi.Synthesizer +# javax.sound.midi.Transmitter +# +# The following keys are recognized by AudioSystem methods: +# +# javax.sound.sampled.Clip +# javax.sound.sampled.Port +# javax.sound.sampled.SourceDataLine +# javax.sound.sampled.TargetDataLine +# +# The values specify the full class name of the service +# provider, or the device name. +# +# See the class descriptions for details. +# +# Example 1: +# Use MyDeviceProvider as default for SourceDataLines: +# javax.sound.sampled.SourceDataLine=com.xyz.MyDeviceProvider +# +# Example 2: +# Specify the default Synthesizer by its name "InternalSynth". +# javax.sound.midi.Synthesizer=#InternalSynth +# +# Example 3: +# Specify the default Receiver by provider and name: +# javax.sound.midi.Receiver=com.sun.media.sound.MidiProvider#SunMIDI1 +# diff --git a/jalview_java/include/classfile_constants.h b/jalview_java/include/classfile_constants.h new file mode 100644 index 0000000..68628b1 --- /dev/null +++ b/jalview_java/include/classfile_constants.h @@ -0,0 +1,582 @@ +/* + * Copyright (c) 2004, 2017, Oracle and/or its affiliates. All rights reserved. + * DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. + * + * This code is free software; you can redistribute it and/or modify it + * under the terms of the GNU General Public License version 2 only, as + * published by the Free Software Foundation. Oracle designates this + * particular file as subject to the "Classpath" exception as provided + * by Oracle in the LICENSE file that accompanied this code. + * + * This code is distributed in the hope that it will be useful, but WITHOUT + * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or + * FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License + * version 2 for more details (a copy is included in the LICENSE file that + * accompanied this code). + * + * You should have received a copy of the GNU General Public License version + * 2 along with this work; if not, write to the Free Software Foundation, + * Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. + * + * Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA + * or visit www.oracle.com if you need additional information or have any + * questions. + */ + +#ifndef CLASSFILE_CONSTANTS_H +#define CLASSFILE_CONSTANTS_H + +#ifdef __cplusplus +extern "C" { +#endif + +/* Classfile version number for this information */ +#define JVM_CLASSFILE_MAJOR_VERSION 55 +#define JVM_CLASSFILE_MINOR_VERSION 0 + +/* Flags */ + +enum { + JVM_ACC_PUBLIC = 0x0001, + JVM_ACC_PRIVATE = 0x0002, + JVM_ACC_PROTECTED = 0x0004, + JVM_ACC_STATIC = 0x0008, + JVM_ACC_FINAL = 0x0010, + JVM_ACC_SYNCHRONIZED = 0x0020, + JVM_ACC_SUPER = 0x0020, + JVM_ACC_VOLATILE = 0x0040, + JVM_ACC_BRIDGE = 0x0040, + JVM_ACC_TRANSIENT = 0x0080, + JVM_ACC_VARARGS = 0x0080, + JVM_ACC_NATIVE = 0x0100, + JVM_ACC_INTERFACE = 0x0200, + JVM_ACC_ABSTRACT = 0x0400, + JVM_ACC_STRICT = 0x0800, + JVM_ACC_SYNTHETIC = 0x1000, + JVM_ACC_ANNOTATION = 0x2000, + JVM_ACC_ENUM = 0x4000, + JVM_ACC_MODULE = 0x8000 +}; + +#define JVM_ACC_PUBLIC_BIT 0 +#define JVM_ACC_PRIVATE_BIT 1 +#define JVM_ACC_PROTECTED_BIT 2 +#define JVM_ACC_STATIC_BIT 3 +#define JVM_ACC_FINAL_BIT 4 +#define JVM_ACC_SYNCHRONIZED_BIT 5 +#define JVM_ACC_SUPER_BIT 5 +#define JVM_ACC_VOLATILE_BIT 6 +#define JVM_ACC_BRIDGE_BIT 6 +#define JVM_ACC_TRANSIENT_BIT 7 +#define JVM_ACC_VARARGS_BIT 7 +#define JVM_ACC_NATIVE_BIT 8 +#define JVM_ACC_INTERFACE_BIT 9 +#define JVM_ACC_ABSTRACT_BIT 10 +#define JVM_ACC_STRICT_BIT 11 +#define JVM_ACC_SYNTHETIC_BIT 12 +#define JVM_ACC_ANNOTATION_BIT 13 +#define JVM_ACC_ENUM_BIT 14 + +/* Used in newarray instruction. */ + +enum { + JVM_T_BOOLEAN = 4, + JVM_T_CHAR = 5, + JVM_T_FLOAT = 6, + JVM_T_DOUBLE = 7, + JVM_T_BYTE = 8, + JVM_T_SHORT = 9, + JVM_T_INT = 10, + JVM_T_LONG = 11 +}; + +/* Constant Pool Entries */ + +enum { + JVM_CONSTANT_Utf8 = 1, + JVM_CONSTANT_Unicode = 2, /* unused */ + JVM_CONSTANT_Integer = 3, + JVM_CONSTANT_Float = 4, + JVM_CONSTANT_Long = 5, + JVM_CONSTANT_Double = 6, + JVM_CONSTANT_Class = 7, + JVM_CONSTANT_String = 8, + JVM_CONSTANT_Fieldref = 9, + JVM_CONSTANT_Methodref = 10, + JVM_CONSTANT_InterfaceMethodref = 11, + JVM_CONSTANT_NameAndType = 12, + JVM_CONSTANT_MethodHandle = 15, // JSR 292 + JVM_CONSTANT_MethodType = 16, // JSR 292 + JVM_CONSTANT_Dynamic = 17, + JVM_CONSTANT_InvokeDynamic = 18, + JVM_CONSTANT_ExternalMax = 18 +}; + +/* JVM_CONSTANT_MethodHandle subtypes */ +enum { + JVM_REF_getField = 1, + JVM_REF_getStatic = 2, + JVM_REF_putField = 3, + JVM_REF_putStatic = 4, + JVM_REF_invokeVirtual = 5, + JVM_REF_invokeStatic = 6, + JVM_REF_invokeSpecial = 7, + JVM_REF_newInvokeSpecial = 8, + JVM_REF_invokeInterface = 9 +}; + +/* StackMapTable type item numbers */ + +enum { + JVM_ITEM_Top = 0, + JVM_ITEM_Integer = 1, + JVM_ITEM_Float = 2, + JVM_ITEM_Double = 3, + JVM_ITEM_Long = 4, + JVM_ITEM_Null = 5, + JVM_ITEM_UninitializedThis = 6, + JVM_ITEM_Object = 7, + JVM_ITEM_Uninitialized = 8 +}; + +/* Type signatures */ + +enum { + JVM_SIGNATURE_ARRAY = '[', + JVM_SIGNATURE_BYTE = 'B', + JVM_SIGNATURE_CHAR = 'C', + JVM_SIGNATURE_CLASS = 'L', + JVM_SIGNATURE_ENDCLASS = ';', + JVM_SIGNATURE_ENUM = 'E', + JVM_SIGNATURE_FLOAT = 'F', + JVM_SIGNATURE_DOUBLE = 'D', + JVM_SIGNATURE_FUNC = '(', + JVM_SIGNATURE_ENDFUNC = ')', + JVM_SIGNATURE_INT = 'I', + JVM_SIGNATURE_LONG = 'J', + JVM_SIGNATURE_SHORT = 'S', + JVM_SIGNATURE_VOID = 'V', + JVM_SIGNATURE_BOOLEAN = 'Z' +}; + +/* Opcodes */ + +enum { + JVM_OPC_nop = 0, + JVM_OPC_aconst_null = 1, + JVM_OPC_iconst_m1 = 2, + JVM_OPC_iconst_0 = 3, + JVM_OPC_iconst_1 = 4, + JVM_OPC_iconst_2 = 5, + JVM_OPC_iconst_3 = 6, + JVM_OPC_iconst_4 = 7, + JVM_OPC_iconst_5 = 8, + JVM_OPC_lconst_0 = 9, + JVM_OPC_lconst_1 = 10, + JVM_OPC_fconst_0 = 11, + JVM_OPC_fconst_1 = 12, + JVM_OPC_fconst_2 = 13, + JVM_OPC_dconst_0 = 14, + JVM_OPC_dconst_1 = 15, + JVM_OPC_bipush = 16, + JVM_OPC_sipush = 17, + JVM_OPC_ldc = 18, + JVM_OPC_ldc_w = 19, + JVM_OPC_ldc2_w = 20, + JVM_OPC_iload = 21, + JVM_OPC_lload = 22, + JVM_OPC_fload = 23, + JVM_OPC_dload = 24, + JVM_OPC_aload = 25, + JVM_OPC_iload_0 = 26, + JVM_OPC_iload_1 = 27, + JVM_OPC_iload_2 = 28, + JVM_OPC_iload_3 = 29, + JVM_OPC_lload_0 = 30, + JVM_OPC_lload_1 = 31, + JVM_OPC_lload_2 = 32, + JVM_OPC_lload_3 = 33, + JVM_OPC_fload_0 = 34, + JVM_OPC_fload_1 = 35, + JVM_OPC_fload_2 = 36, + JVM_OPC_fload_3 = 37, + JVM_OPC_dload_0 = 38, + JVM_OPC_dload_1 = 39, + JVM_OPC_dload_2 = 40, + JVM_OPC_dload_3 = 41, + JVM_OPC_aload_0 = 42, + JVM_OPC_aload_1 = 43, + JVM_OPC_aload_2 = 44, + JVM_OPC_aload_3 = 45, + JVM_OPC_iaload = 46, + JVM_OPC_laload = 47, + JVM_OPC_faload = 48, + JVM_OPC_daload = 49, + JVM_OPC_aaload = 50, + JVM_OPC_baload = 51, + JVM_OPC_caload = 52, + JVM_OPC_saload = 53, + JVM_OPC_istore = 54, + JVM_OPC_lstore = 55, + JVM_OPC_fstore = 56, + JVM_OPC_dstore = 57, + JVM_OPC_astore = 58, + JVM_OPC_istore_0 = 59, + JVM_OPC_istore_1 = 60, + JVM_OPC_istore_2 = 61, + JVM_OPC_istore_3 = 62, + JVM_OPC_lstore_0 = 63, + JVM_OPC_lstore_1 = 64, + JVM_OPC_lstore_2 = 65, + JVM_OPC_lstore_3 = 66, + JVM_OPC_fstore_0 = 67, + JVM_OPC_fstore_1 = 68, + JVM_OPC_fstore_2 = 69, + JVM_OPC_fstore_3 = 70, + JVM_OPC_dstore_0 = 71, + JVM_OPC_dstore_1 = 72, + JVM_OPC_dstore_2 = 73, + JVM_OPC_dstore_3 = 74, + JVM_OPC_astore_0 = 75, + JVM_OPC_astore_1 = 76, + JVM_OPC_astore_2 = 77, + JVM_OPC_astore_3 = 78, + JVM_OPC_iastore = 79, + JVM_OPC_lastore = 80, + JVM_OPC_fastore = 81, + JVM_OPC_dastore = 82, + JVM_OPC_aastore = 83, + JVM_OPC_bastore = 84, + JVM_OPC_castore = 85, + JVM_OPC_sastore = 86, + JVM_OPC_pop = 87, + JVM_OPC_pop2 = 88, + JVM_OPC_dup = 89, + JVM_OPC_dup_x1 = 90, + JVM_OPC_dup_x2 = 91, + JVM_OPC_dup2 = 92, + JVM_OPC_dup2_x1 = 93, + JVM_OPC_dup2_x2 = 94, + JVM_OPC_swap = 95, + JVM_OPC_iadd = 96, + JVM_OPC_ladd = 97, + JVM_OPC_fadd = 98, + JVM_OPC_dadd = 99, + JVM_OPC_isub = 100, + JVM_OPC_lsub = 101, + JVM_OPC_fsub = 102, + JVM_OPC_dsub = 103, + JVM_OPC_imul = 104, + JVM_OPC_lmul = 105, + JVM_OPC_fmul = 106, + JVM_OPC_dmul = 107, + JVM_OPC_idiv = 108, + JVM_OPC_ldiv = 109, + JVM_OPC_fdiv = 110, + JVM_OPC_ddiv = 111, + JVM_OPC_irem = 112, + JVM_OPC_lrem = 113, + JVM_OPC_frem = 114, + JVM_OPC_drem = 115, + JVM_OPC_ineg = 116, + JVM_OPC_lneg = 117, + JVM_OPC_fneg = 118, + JVM_OPC_dneg = 119, + JVM_OPC_ishl = 120, + JVM_OPC_lshl = 121, + JVM_OPC_ishr = 122, + JVM_OPC_lshr = 123, + JVM_OPC_iushr = 124, + JVM_OPC_lushr = 125, + JVM_OPC_iand = 126, + JVM_OPC_land = 127, + JVM_OPC_ior = 128, + JVM_OPC_lor = 129, + JVM_OPC_ixor = 130, + JVM_OPC_lxor = 131, + JVM_OPC_iinc = 132, + JVM_OPC_i2l = 133, + JVM_OPC_i2f = 134, + JVM_OPC_i2d = 135, + JVM_OPC_l2i = 136, + JVM_OPC_l2f = 137, + JVM_OPC_l2d = 138, + JVM_OPC_f2i = 139, + JVM_OPC_f2l = 140, + JVM_OPC_f2d = 141, + JVM_OPC_d2i = 142, + JVM_OPC_d2l = 143, + JVM_OPC_d2f = 144, + JVM_OPC_i2b = 145, + JVM_OPC_i2c = 146, + JVM_OPC_i2s = 147, + JVM_OPC_lcmp = 148, + JVM_OPC_fcmpl = 149, + JVM_OPC_fcmpg = 150, + JVM_OPC_dcmpl = 151, + JVM_OPC_dcmpg = 152, + JVM_OPC_ifeq = 153, + JVM_OPC_ifne = 154, + JVM_OPC_iflt = 155, + JVM_OPC_ifge = 156, + JVM_OPC_ifgt = 157, + JVM_OPC_ifle = 158, + JVM_OPC_if_icmpeq = 159, + JVM_OPC_if_icmpne = 160, + JVM_OPC_if_icmplt = 161, + JVM_OPC_if_icmpge = 162, + JVM_OPC_if_icmpgt = 163, + JVM_OPC_if_icmple = 164, + JVM_OPC_if_acmpeq = 165, + JVM_OPC_if_acmpne = 166, + JVM_OPC_goto = 167, + JVM_OPC_jsr = 168, + JVM_OPC_ret = 169, + JVM_OPC_tableswitch = 170, + JVM_OPC_lookupswitch = 171, + JVM_OPC_ireturn = 172, + JVM_OPC_lreturn = 173, + JVM_OPC_freturn = 174, + JVM_OPC_dreturn = 175, + JVM_OPC_areturn = 176, + JVM_OPC_return = 177, + JVM_OPC_getstatic = 178, + JVM_OPC_putstatic = 179, + JVM_OPC_getfield = 180, + JVM_OPC_putfield = 181, + JVM_OPC_invokevirtual = 182, + JVM_OPC_invokespecial = 183, + JVM_OPC_invokestatic = 184, + JVM_OPC_invokeinterface = 185, + JVM_OPC_invokedynamic = 186, + JVM_OPC_new = 187, + JVM_OPC_newarray = 188, + JVM_OPC_anewarray = 189, + JVM_OPC_arraylength = 190, + JVM_OPC_athrow = 191, + JVM_OPC_checkcast = 192, + JVM_OPC_instanceof = 193, + JVM_OPC_monitorenter = 194, + JVM_OPC_monitorexit = 195, + JVM_OPC_wide = 196, + JVM_OPC_multianewarray = 197, + JVM_OPC_ifnull = 198, + JVM_OPC_ifnonnull = 199, + JVM_OPC_goto_w = 200, + JVM_OPC_jsr_w = 201, + JVM_OPC_MAX = 201 +}; + +/* Opcode length initializer, use with something like: + * unsigned char opcode_length[JVM_OPC_MAX+1] = JVM_OPCODE_LENGTH_INITIALIZER; + */ +#define JVM_OPCODE_LENGTH_INITIALIZER { \ + 1, /* nop */ \ + 1, /* aconst_null */ \ + 1, /* iconst_m1 */ \ + 1, /* iconst_0 */ \ + 1, /* iconst_1 */ \ + 1, /* iconst_2 */ \ + 1, /* iconst_3 */ \ + 1, /* iconst_4 */ \ + 1, /* iconst_5 */ \ + 1, /* lconst_0 */ \ + 1, /* lconst_1 */ \ + 1, /* fconst_0 */ \ + 1, /* fconst_1 */ \ + 1, /* fconst_2 */ \ + 1, /* dconst_0 */ \ + 1, /* dconst_1 */ \ + 2, /* bipush */ \ + 3, /* sipush */ \ + 2, /* ldc */ \ + 3, /* ldc_w */ \ + 3, /* ldc2_w */ \ + 2, /* iload */ \ + 2, /* lload */ \ + 2, /* fload */ \ + 2, /* dload */ \ + 2, /* aload */ \ + 1, /* iload_0 */ \ + 1, /* iload_1 */ \ + 1, /* iload_2 */ \ + 1, /* iload_3 */ \ + 1, /* lload_0 */ \ + 1, /* lload_1 */ \ + 1, /* lload_2 */ \ + 1, /* lload_3 */ \ + 1, /* fload_0 */ \ + 1, /* fload_1 */ \ + 1, /* fload_2 */ \ + 1, /* fload_3 */ \ + 1, /* dload_0 */ \ + 1, /* dload_1 */ \ + 1, /* dload_2 */ \ + 1, /* dload_3 */ \ + 1, /* aload_0 */ \ + 1, /* aload_1 */ \ + 1, /* aload_2 */ \ + 1, /* aload_3 */ \ + 1, /* iaload */ \ + 1, /* laload */ \ + 1, /* faload */ \ + 1, /* daload */ \ + 1, /* aaload */ \ + 1, /* baload */ \ + 1, /* caload */ \ + 1, /* saload */ \ + 2, /* istore */ \ + 2, /* lstore */ \ + 2, /* fstore */ \ + 2, /* dstore */ \ + 2, /* astore */ \ + 1, /* istore_0 */ \ + 1, /* istore_1 */ \ + 1, /* istore_2 */ \ + 1, /* istore_3 */ \ + 1, /* lstore_0 */ \ + 1, /* lstore_1 */ \ + 1, /* lstore_2 */ \ + 1, /* lstore_3 */ \ + 1, /* fstore_0 */ \ + 1, /* fstore_1 */ \ + 1, /* fstore_2 */ \ + 1, /* fstore_3 */ \ + 1, /* dstore_0 */ \ + 1, /* dstore_1 */ \ + 1, /* dstore_2 */ \ + 1, /* dstore_3 */ \ + 1, /* astore_0 */ \ + 1, /* astore_1 */ \ + 1, /* astore_2 */ \ + 1, /* astore_3 */ \ + 1, /* iastore */ \ + 1, /* lastore */ \ + 1, /* fastore */ \ + 1, /* dastore */ \ + 1, /* aastore */ \ + 1, /* bastore */ \ + 1, /* castore */ \ + 1, /* sastore */ \ + 1, /* pop */ \ + 1, /* pop2 */ \ + 1, /* dup */ \ + 1, /* dup_x1 */ \ + 1, /* dup_x2 */ \ + 1, /* dup2 */ \ + 1, /* dup2_x1 */ \ + 1, /* dup2_x2 */ \ + 1, /* swap */ \ + 1, /* iadd */ \ + 1, /* ladd */ \ + 1, /* fadd */ \ + 1, /* dadd */ \ + 1, /* isub */ \ + 1, /* lsub */ \ + 1, /* fsub */ \ + 1, /* dsub */ \ + 1, /* imul */ \ + 1, /* lmul */ \ + 1, /* fmul */ \ + 1, /* dmul */ \ + 1, /* idiv */ \ + 1, /* ldiv */ \ + 1, /* fdiv */ \ + 1, /* ddiv */ \ + 1, /* irem */ \ + 1, /* lrem */ \ + 1, /* frem */ \ + 1, /* drem */ \ + 1, /* ineg */ \ + 1, /* lneg */ \ + 1, /* fneg */ \ + 1, /* dneg */ \ + 1, /* ishl */ \ + 1, /* lshl */ \ + 1, /* ishr */ \ + 1, /* lshr */ \ + 1, /* iushr */ \ + 1, /* lushr */ \ + 1, /* iand */ \ + 1, /* land */ \ + 1, /* ior */ \ + 1, /* lor */ \ + 1, /* ixor */ \ + 1, /* lxor */ \ + 3, /* iinc */ \ + 1, /* i2l */ \ + 1, /* i2f */ \ + 1, /* i2d */ \ + 1, /* l2i */ \ + 1, /* l2f */ \ + 1, /* l2d */ \ + 1, /* f2i */ \ + 1, /* f2l */ \ + 1, /* f2d */ \ + 1, /* d2i */ \ + 1, /* d2l */ \ + 1, /* d2f */ \ + 1, /* i2b */ \ + 1, /* i2c */ \ + 1, /* i2s */ \ + 1, /* lcmp */ \ + 1, /* fcmpl */ \ + 1, /* fcmpg */ \ + 1, /* dcmpl */ \ + 1, /* dcmpg */ \ + 3, /* ifeq */ \ + 3, /* ifne */ \ + 3, /* iflt */ \ + 3, /* ifge */ \ + 3, /* ifgt */ \ + 3, /* ifle */ \ + 3, /* if_icmpeq */ \ + 3, /* if_icmpne */ \ + 3, /* if_icmplt */ \ + 3, /* if_icmpge */ \ + 3, /* if_icmpgt */ \ + 3, /* if_icmple */ \ + 3, /* if_acmpeq */ \ + 3, /* if_acmpne */ \ + 3, /* goto */ \ + 3, /* jsr */ \ + 2, /* ret */ \ + 99, /* tableswitch */ \ + 99, /* lookupswitch */ \ + 1, /* ireturn */ \ + 1, /* lreturn */ \ + 1, /* freturn */ \ + 1, /* dreturn */ \ + 1, /* areturn */ \ + 1, /* return */ \ + 3, /* getstatic */ \ + 3, /* putstatic */ \ + 3, /* getfield */ \ + 3, /* putfield */ \ + 3, /* invokevirtual */ \ + 3, /* invokespecial */ \ + 3, /* invokestatic */ \ + 5, /* invokeinterface */ \ + 5, /* invokedynamic */ \ + 3, /* new */ \ + 2, /* newarray */ \ + 3, /* anewarray */ \ + 1, /* arraylength */ \ + 1, /* athrow */ \ + 3, /* checkcast */ \ + 3, /* instanceof */ \ + 1, /* monitorenter */ \ + 1, /* monitorexit */ \ + 0, /* wide */ \ + 4, /* multianewarray */ \ + 3, /* ifnull */ \ + 3, /* ifnonnull */ \ + 5, /* goto_w */ \ + 5 /* jsr_w */ \ +} + +#ifdef __cplusplus +} /* extern "C" */ +#endif /* __cplusplus */ + +#endif /* CLASSFILE_CONSTANTS */ diff --git a/jalview_java/include/darwin/jawt_md.h b/jalview_java/include/darwin/jawt_md.h new file mode 100644 index 0000000..94a13c9 --- /dev/null +++ b/jalview_java/include/darwin/jawt_md.h @@ -0,0 +1,77 @@ +/* + * Copyright (c) 1999, 2013, Oracle and/or its affiliates. All rights reserved. + * DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. + * + * This code is free software; you can redistribute it and/or modify it + * under the terms of the GNU General Public License version 2 only, as + * published by the Free Software Foundation. Oracle designates this + * particular file as subject to the "Classpath" exception as provided + * by Oracle in the LICENSE file that accompanied this code. + * + * This code is distributed in the hope that it will be useful, but WITHOUT + * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or + * FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License + * version 2 for more details (a copy is included in the LICENSE file that + * accompanied this code). + * + * You should have received a copy of the GNU General Public License version + * 2 along with this work; if not, write to the Free Software Foundation, + * Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. + * + * Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA + * or visit www.oracle.com if you need additional information or have any + * questions. + */ + +#ifndef _JAVASOFT_JAWT_MD_H_ +#define _JAVASOFT_JAWT_MD_H_ + +#include "jawt.h" + +#ifdef __OBJC__ +#import +#endif + +#ifdef __cplusplus +extern "C" { +#endif + +/* + * MacOS specific declarations for AWT native interface. + * See notes in jawt.h for an example of use. + */ + +/* + * When calling JAWT_GetAWT with a JAWT version less than 1.7, you must pass this + * flag or you will not be able to get a valid drawing surface and JAWT_GetAWT will + * return false. This is to maintain compatibility with applications that used the + * interface with Java 6 which had multiple rendering models. This flag is not necessary + * when JAWT version 1.7 or greater is used as this is the only supported rendering mode. + * + * Example: + * JAWT awt; + * awt.version = JAWT_VERSION_1_4 | JAWT_MACOSX_USE_CALAYER; + * jboolean success = JAWT_GetAWT(env, &awt); + */ +#define JAWT_MACOSX_USE_CALAYER 0x80000000 + +/* + * When the native Cocoa toolkit is in use, the pointer stored in + * JAWT_DrawingSurfaceInfo->platformInfo points to a NSObject that conforms to the + * JAWT_SurfaceLayers protocol. Setting the layer property of this object will cause the + * specified layer to be overlaid on the Components rectangle. If the window the + * Component belongs to has a CALayer attached to it, this layer will be accessible via + * the windowLayer property. + */ +#ifdef __OBJC__ +@protocol JAWT_SurfaceLayers +@property (readwrite, retain) CALayer *layer; +@property (readonly) CALayer *windowLayer; +@end +#endif + +#ifdef __cplusplus +} +#endif + +#endif /* !_JAVASOFT_JAWT_MD_H_ */ diff --git a/jalview_java/include/darwin/jni_md.h b/jalview_java/include/darwin/jni_md.h new file mode 100644 index 0000000..6e35203 --- /dev/null +++ b/jalview_java/include/darwin/jni_md.h @@ -0,0 +1,56 @@ +/* + * Copyright (c) 1996, 2013, Oracle and/or its affiliates. All rights reserved. + * DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. + * + * This code is free software; you can redistribute it and/or modify it + * under the terms of the GNU General Public License version 2 only, as + * published by the Free Software Foundation. Oracle designates this + * particular file as subject to the "Classpath" exception as provided + * by Oracle in the LICENSE file that accompanied this code. + * + * This code is distributed in the hope that it will be useful, but WITHOUT + * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or + * FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License + * version 2 for more details (a copy is included in the LICENSE file that + * accompanied this code). + * + * You should have received a copy of the GNU General Public License version + * 2 along with this work; if not, write to the Free Software Foundation, + * Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. + * + * Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA + * or visit www.oracle.com if you need additional information or have any + * questions. + */ + +#ifndef _JAVASOFT_JNI_MD_H_ +#define _JAVASOFT_JNI_MD_H_ + +#ifndef __has_attribute + #define __has_attribute(x) 0 +#endif +#if (defined(__GNUC__) && ((__GNUC__ > 4) || (__GNUC__ == 4) && (__GNUC_MINOR__ > 2))) || __has_attribute(visibility) + #ifdef ARM + #define JNIEXPORT __attribute__((externally_visible,visibility("default"))) + #define JNIIMPORT __attribute__((externally_visible,visibility("default"))) + #else + #define JNIEXPORT __attribute__((visibility("default"))) + #define JNIIMPORT __attribute__((visibility("default"))) + #endif +#else + #define JNIEXPORT + #define JNIIMPORT +#endif + +#define JNICALL + +typedef int jint; +#ifdef _LP64 +typedef long jlong; +#else +typedef long long jlong; +#endif + +typedef signed char jbyte; + +#endif /* !_JAVASOFT_JNI_MD_H_ */ diff --git a/jalview_java/include/jawt.h b/jalview_java/include/jawt.h new file mode 100644 index 0000000..2079b0b --- /dev/null +++ b/jalview_java/include/jawt.h @@ -0,0 +1,356 @@ +/* + * Copyright (c) 1999, 2017, Oracle and/or its affiliates. All rights reserved. + * DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. + * + * This code is free software; you can redistribute it and/or modify it + * under the terms of the GNU General Public License version 2 only, as + * published by the Free Software Foundation. Oracle designates this + * particular file as subject to the "Classpath" exception as provided + * by Oracle in the LICENSE file that accompanied this code. + * + * This code is distributed in the hope that it will be useful, but WITHOUT + * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or + * FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License + * version 2 for more details (a copy is included in the LICENSE file that + * accompanied this code). + * + * You should have received a copy of the GNU General Public License version + * 2 along with this work; if not, write to the Free Software Foundation, + * Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. + * + * Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA + * or visit www.oracle.com if you need additional information or have any + * questions. + */ + +#ifndef _JAVASOFT_JAWT_H_ +#define _JAVASOFT_JAWT_H_ + +#include "jni.h" + +#ifdef __cplusplus +extern "C" { +#endif + +/* + * AWT native interface. + * + * The AWT native interface allows a native C or C++ application a means + * by which to access native structures in AWT. This is to facilitate moving + * legacy C and C++ applications to Java and to target the needs of the + * developers who need to do their own native rendering to canvases + * for performance or other reasons. + * + * Conversely it also provides mechanisms for an application which already + * has a native window to provide that to AWT for AWT rendering. + * + * Since every platform may be different in its native data structures + * and APIs for windowing systems the application must necessarily + * provided per-platform source and compile and deliver per-platform + * native code to use this API. + * + * These interfaces are not part of the Java SE specification and + * a VM is not required to implement this API. However it is strongly + * recommended that all implementations which support headful AWT + * also support these interfaces. + * + */ + +/* + * AWT Native Drawing Surface (JAWT_DrawingSurface). + * + * For each platform, there is a native drawing surface structure. This + * platform-specific structure can be found in jawt_md.h. It is recommended + * that additional platforms follow the same model. It is also recommended + * that VMs on all platforms support the existing structures in jawt_md.h. + * + ******************* + * EXAMPLE OF USAGE: + ******************* + * + * In Win32, a programmer wishes to access the HWND of a canvas to perform + * native rendering into it. The programmer has declared the paint() method + * for their canvas subclass to be native: + * + * + * MyCanvas.java: + * + * import java.awt.*; + * + * public class MyCanvas extends Canvas { + * + * static { + * System.loadLibrary("mylib"); + * } + * + * public native void paint(Graphics g); + * } + * + * + * myfile.c: + * + * #include "jawt_md.h" + * #include + * + * JNIEXPORT void JNICALL + * Java_MyCanvas_paint(JNIEnv* env, jobject canvas, jobject graphics) + * { + * JAWT awt; + * JAWT_DrawingSurface* ds; + * JAWT_DrawingSurfaceInfo* dsi; + * JAWT_Win32DrawingSurfaceInfo* dsi_win; + * jboolean result; + * jint lock; + * + * // Get the AWT. Request version 9 to access features in that release. + * awt.version = JAWT_VERSION_9; + * result = JAWT_GetAWT(env, &awt); + * assert(result != JNI_FALSE); + * + * // Get the drawing surface + * ds = awt.GetDrawingSurface(env, canvas); + * assert(ds != NULL); + * + * // Lock the drawing surface + * lock = ds->Lock(ds); + * assert((lock & JAWT_LOCK_ERROR) == 0); + * + * // Get the drawing surface info + * dsi = ds->GetDrawingSurfaceInfo(ds); + * + * // Get the platform-specific drawing info + * dsi_win = (JAWT_Win32DrawingSurfaceInfo*)dsi->platformInfo; + * + * ////////////////////////////// + * // !!! DO PAINTING HERE !!! // + * ////////////////////////////// + * + * // Free the drawing surface info + * ds->FreeDrawingSurfaceInfo(dsi); + * + * // Unlock the drawing surface + * ds->Unlock(ds); + * + * // Free the drawing surface + * awt.FreeDrawingSurface(ds); + * } + * + */ + +/* + * JAWT_Rectangle + * Structure for a native rectangle. + */ +typedef struct jawt_Rectangle { + jint x; + jint y; + jint width; + jint height; +} JAWT_Rectangle; + +struct jawt_DrawingSurface; + +/* + * JAWT_DrawingSurfaceInfo + * Structure for containing the underlying drawing information of a component. + */ +typedef struct jawt_DrawingSurfaceInfo { + /* + * Pointer to the platform-specific information. This can be safely + * cast to a JAWT_Win32DrawingSurfaceInfo on Windows or a + * JAWT_X11DrawingSurfaceInfo on Linux and Solaris. On Mac OS X this is a + * pointer to a NSObject that conforms to the JAWT_SurfaceLayers + * protocol. See jawt_md.h for details. + */ + void* platformInfo; + /* Cached pointer to the underlying drawing surface */ + struct jawt_DrawingSurface* ds; + /* Bounding rectangle of the drawing surface */ + JAWT_Rectangle bounds; + /* Number of rectangles in the clip */ + jint clipSize; + /* Clip rectangle array */ + JAWT_Rectangle* clip; +} JAWT_DrawingSurfaceInfo; + +#define JAWT_LOCK_ERROR 0x00000001 +#define JAWT_LOCK_CLIP_CHANGED 0x00000002 +#define JAWT_LOCK_BOUNDS_CHANGED 0x00000004 +#define JAWT_LOCK_SURFACE_CHANGED 0x00000008 + +/* + * JAWT_DrawingSurface + * Structure for containing the underlying drawing information of a component. + * All operations on a JAWT_DrawingSurface MUST be performed from the same + * thread as the call to GetDrawingSurface. + */ +typedef struct jawt_DrawingSurface { + /* + * Cached reference to the Java environment of the calling thread. + * If Lock(), Unlock(), GetDrawingSurfaceInfo() or + * FreeDrawingSurfaceInfo() are called from a different thread, + * this data member should be set before calling those functions. + */ + JNIEnv* env; + /* Cached reference to the target object */ + jobject target; + /* + * Lock the surface of the target component for native rendering. + * When finished drawing, the surface must be unlocked with + * Unlock(). This function returns a bitmask with one or more of the + * following values: + * + * JAWT_LOCK_ERROR - When an error has occurred and the surface could not + * be locked. + * + * JAWT_LOCK_CLIP_CHANGED - When the clip region has changed. + * + * JAWT_LOCK_BOUNDS_CHANGED - When the bounds of the surface have changed. + * + * JAWT_LOCK_SURFACE_CHANGED - When the surface itself has changed + */ + jint (JNICALL *Lock) + (struct jawt_DrawingSurface* ds); + /* + * Get the drawing surface info. + * The value returned may be cached, but the values may change if + * additional calls to Lock() or Unlock() are made. + * Lock() must be called before this can return a valid value. + * Returns NULL if an error has occurred. + * When finished with the returned value, FreeDrawingSurfaceInfo must be + * called. + */ + JAWT_DrawingSurfaceInfo* (JNICALL *GetDrawingSurfaceInfo) + (struct jawt_DrawingSurface* ds); + /* + * Free the drawing surface info. + */ + void (JNICALL *FreeDrawingSurfaceInfo) + (JAWT_DrawingSurfaceInfo* dsi); + /* + * Unlock the drawing surface of the target component for native rendering. + */ + void (JNICALL *Unlock) + (struct jawt_DrawingSurface* ds); +} JAWT_DrawingSurface; + +/* + * JAWT + * Structure for containing native AWT functions. + */ +typedef struct jawt { + /* + * Version of this structure. This must always be set before + * calling JAWT_GetAWT(). It affects the functions returned. + * Must be one of the known pre-defined versions. + */ + jint version; + /* + * Return a drawing surface from a target jobject. This value + * may be cached. + * Returns NULL if an error has occurred. + * Target must be a java.awt.Component (should be a Canvas + * or Window for native rendering). + * FreeDrawingSurface() must be called when finished with the + * returned JAWT_DrawingSurface. + */ + JAWT_DrawingSurface* (JNICALL *GetDrawingSurface) + (JNIEnv* env, jobject target); + /* + * Free the drawing surface allocated in GetDrawingSurface. + */ + void (JNICALL *FreeDrawingSurface) + (JAWT_DrawingSurface* ds); + /* + * Since 1.4 + * Locks the entire AWT for synchronization purposes + */ + void (JNICALL *Lock)(JNIEnv* env); + /* + * Since 1.4 + * Unlocks the entire AWT for synchronization purposes + */ + void (JNICALL *Unlock)(JNIEnv* env); + /* + * Since 1.4 + * Returns a reference to a java.awt.Component from a native + * platform handle. On Windows, this corresponds to an HWND; + * on Solaris and Linux, this is a Drawable. For other platforms, + * see the appropriate machine-dependent header file for a description. + * The reference returned by this function is a local + * reference that is only valid in this environment. + * This function returns a NULL reference if no component could be + * found with matching platform information. + */ + jobject (JNICALL *GetComponent)(JNIEnv* env, void* platformInfo); + + /** + * Since 9 + * Creates a java.awt.Frame placed in a native container. Container is + * referenced by the native platform handle. For example on Windows this + * corresponds to an HWND. For other platforms, see the appropriate + * machine-dependent header file for a description. The reference returned + * by this function is a local reference that is only valid in this + * environment. This function returns a NULL reference if no frame could be + * created with matching platform information. + */ + jobject (JNICALL *CreateEmbeddedFrame) (JNIEnv *env, void* platformInfo); + + /** + * Since 9 + * Moves and resizes the embedded frame. The new location of the top-left + * corner is specified by x and y parameters relative to the native parent + * component. The new size is specified by width and height. + * + * The embedded frame should be created by CreateEmbeddedFrame() method, or + * this function will not have any effect. + * + * java.awt.Component.setLocation() and java.awt.Component.setBounds() for + * EmbeddedFrame really don't move it within the native parent. These + * methods always locate the embedded frame at (0, 0) for backward + * compatibility. To allow moving embedded frames this method was + * introduced, and it works just the same way as setLocation() and + * setBounds() for usual, non-embedded components. + * + * Using usual get/setLocation() and get/setBounds() together with this new + * method is not recommended. + */ + void (JNICALL *SetBounds) (JNIEnv *env, jobject embeddedFrame, + jint x, jint y, jint w, jint h); + /** + * Since 9 + * Synthesize a native message to activate or deactivate an EmbeddedFrame + * window depending on the value of parameter doActivate, if "true" + * activates the window; otherwise, deactivates the window. + * + * The embedded frame should be created by CreateEmbeddedFrame() method, or + * this function will not have any effect. + */ + void (JNICALL *SynthesizeWindowActivation) (JNIEnv *env, + jobject embeddedFrame, jboolean doActivate); +} JAWT; + +/* + * Get the AWT native structure. This function returns JNI_FALSE if + * an error occurs. + */ +_JNI_IMPORT_OR_EXPORT_ +jboolean JNICALL JAWT_GetAWT(JNIEnv* env, JAWT* awt); + +/* + * Specify one of these constants as the JAWT.version + * Specifying an earlier version will limit the available functions to + * those provided in that earlier version of JAWT. + * See the "Since" note on each API. Methods with no "Since" + * may be presumed to be present in JAWT_VERSION_1_3. + */ +#define JAWT_VERSION_1_3 0x00010003 +#define JAWT_VERSION_1_4 0x00010004 +#define JAWT_VERSION_1_7 0x00010007 +#define JAWT_VERSION_9 0x00090000 + +#ifdef __cplusplus +} /* extern "C" */ +#endif + +#endif /* !_JAVASOFT_JAWT_H_ */ diff --git a/jalview_java/include/jni.h b/jalview_java/include/jni.h new file mode 100644 index 0000000..e15503f --- /dev/null +++ b/jalview_java/include/jni.h @@ -0,0 +1,1973 @@ +/* + * Copyright (c) 1996, 2016, Oracle and/or its affiliates. All rights reserved. + * DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. + * + * This code is free software; you can redistribute it and/or modify it + * under the terms of the GNU General Public License version 2 only, as + * published by the Free Software Foundation. Oracle designates this + * particular file as subject to the "Classpath" exception as provided + * by Oracle in the LICENSE file that accompanied this code. + * + * This code is distributed in the hope that it will be useful, but WITHOUT + * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or + * FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License + * version 2 for more details (a copy is included in the LICENSE file that + * accompanied this code). + * + * You should have received a copy of the GNU General Public License version + * 2 along with this work; if not, write to the Free Software Foundation, + * Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. + * + * Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA + * or visit www.oracle.com if you need additional information or have any + * questions. + */ + +/* + * We used part of Netscape's Java Runtime Interface (JRI) as the starting + * point of our design and implementation. + */ + +/****************************************************************************** + * Java Runtime Interface + * Copyright (c) 1996 Netscape Communications Corporation. All rights reserved. + *****************************************************************************/ + +#ifndef _JAVASOFT_JNI_H_ +#define _JAVASOFT_JNI_H_ + +#include +#include + +/* jni_md.h contains the machine-dependent typedefs for jbyte, jint + and jlong */ + +#include "jni_md.h" + +#ifdef __cplusplus +extern "C" { +#endif + +/* + * JNI Types + */ + +#ifndef JNI_TYPES_ALREADY_DEFINED_IN_JNI_MD_H + +typedef unsigned char jboolean; +typedef unsigned short jchar; +typedef short jshort; +typedef float jfloat; +typedef double jdouble; + +typedef jint jsize; + +#ifdef __cplusplus + +class _jobject {}; +class _jclass : public _jobject {}; +class _jthrowable : public _jobject {}; +class _jstring : public _jobject {}; +class _jarray : public _jobject {}; +class _jbooleanArray : public _jarray {}; +class _jbyteArray : public _jarray {}; +class _jcharArray : public _jarray {}; +class _jshortArray : public _jarray {}; +class _jintArray : public _jarray {}; +class _jlongArray : public _jarray {}; +class _jfloatArray : public _jarray {}; +class _jdoubleArray : public _jarray {}; +class _jobjectArray : public _jarray {}; + +typedef _jobject *jobject; +typedef _jclass *jclass; +typedef _jthrowable *jthrowable; +typedef _jstring *jstring; +typedef _jarray *jarray; +typedef _jbooleanArray *jbooleanArray; +typedef _jbyteArray *jbyteArray; +typedef _jcharArray *jcharArray; +typedef _jshortArray *jshortArray; +typedef _jintArray *jintArray; +typedef _jlongArray *jlongArray; +typedef _jfloatArray *jfloatArray; +typedef _jdoubleArray *jdoubleArray; +typedef _jobjectArray *jobjectArray; + +#else + +struct _jobject; + +typedef struct _jobject *jobject; +typedef jobject jclass; +typedef jobject jthrowable; +typedef jobject jstring; +typedef jobject jarray; +typedef jarray jbooleanArray; +typedef jarray jbyteArray; +typedef jarray jcharArray; +typedef jarray jshortArray; +typedef jarray jintArray; +typedef jarray jlongArray; +typedef jarray jfloatArray; +typedef jarray jdoubleArray; +typedef jarray jobjectArray; + +#endif + +typedef jobject jweak; + +typedef union jvalue { + jboolean z; + jbyte b; + jchar c; + jshort s; + jint i; + jlong j; + jfloat f; + jdouble d; + jobject l; +} jvalue; + +struct _jfieldID; +typedef struct _jfieldID *jfieldID; + +struct _jmethodID; +typedef struct _jmethodID *jmethodID; + +/* Return values from jobjectRefType */ +typedef enum _jobjectType { + JNIInvalidRefType = 0, + JNILocalRefType = 1, + JNIGlobalRefType = 2, + JNIWeakGlobalRefType = 3 +} jobjectRefType; + + +#endif /* JNI_TYPES_ALREADY_DEFINED_IN_JNI_MD_H */ + +/* + * jboolean constants + */ + +#define JNI_FALSE 0 +#define JNI_TRUE 1 + +/* + * possible return values for JNI functions. + */ + +#define JNI_OK 0 /* success */ +#define JNI_ERR (-1) /* unknown error */ +#define JNI_EDETACHED (-2) /* thread detached from the VM */ +#define JNI_EVERSION (-3) /* JNI version error */ +#define JNI_ENOMEM (-4) /* not enough memory */ +#define JNI_EEXIST (-5) /* VM already created */ +#define JNI_EINVAL (-6) /* invalid arguments */ + +/* + * used in ReleaseScalarArrayElements + */ + +#define JNI_COMMIT 1 +#define JNI_ABORT 2 + +/* + * used in RegisterNatives to describe native method name, signature, + * and function pointer. + */ + +typedef struct { + char *name; + char *signature; + void *fnPtr; +} JNINativeMethod; + +/* + * JNI Native Method Interface. + */ + +struct JNINativeInterface_; + +struct JNIEnv_; + +#ifdef __cplusplus +typedef JNIEnv_ JNIEnv; +#else +typedef const struct JNINativeInterface_ *JNIEnv; +#endif + +/* + * JNI Invocation Interface. + */ + +struct JNIInvokeInterface_; + +struct JavaVM_; + +#ifdef __cplusplus +typedef JavaVM_ JavaVM; +#else +typedef const struct JNIInvokeInterface_ *JavaVM; +#endif + +struct JNINativeInterface_ { + void *reserved0; + void *reserved1; + void *reserved2; + + void *reserved3; + jint (JNICALL *GetVersion)(JNIEnv *env); + + jclass (JNICALL *DefineClass) + (JNIEnv *env, const char *name, jobject loader, const jbyte *buf, + jsize len); + jclass (JNICALL *FindClass) + (JNIEnv *env, const char *name); + + jmethodID (JNICALL *FromReflectedMethod) + (JNIEnv *env, jobject method); + jfieldID (JNICALL *FromReflectedField) + (JNIEnv *env, jobject field); + + jobject (JNICALL *ToReflectedMethod) + (JNIEnv *env, jclass cls, jmethodID methodID, jboolean isStatic); + + jclass (JNICALL *GetSuperclass) + (JNIEnv *env, jclass sub); + jboolean (JNICALL *IsAssignableFrom) + (JNIEnv *env, jclass sub, jclass sup); + + jobject (JNICALL *ToReflectedField) + (JNIEnv *env, jclass cls, jfieldID fieldID, jboolean isStatic); + + jint (JNICALL *Throw) + (JNIEnv *env, jthrowable obj); + jint (JNICALL *ThrowNew) + (JNIEnv *env, jclass clazz, const char *msg); + jthrowable (JNICALL *ExceptionOccurred) + (JNIEnv *env); + void (JNICALL *ExceptionDescribe) + (JNIEnv *env); + void (JNICALL *ExceptionClear) + (JNIEnv *env); + void (JNICALL *FatalError) + (JNIEnv *env, const char *msg); + + jint (JNICALL *PushLocalFrame) + (JNIEnv *env, jint capacity); + jobject (JNICALL *PopLocalFrame) + (JNIEnv *env, jobject result); + + jobject (JNICALL *NewGlobalRef) + (JNIEnv *env, jobject lobj); + void (JNICALL *DeleteGlobalRef) + (JNIEnv *env, jobject gref); + void (JNICALL *DeleteLocalRef) + (JNIEnv *env, jobject obj); + jboolean (JNICALL *IsSameObject) + (JNIEnv *env, jobject obj1, jobject obj2); + jobject (JNICALL *NewLocalRef) + (JNIEnv *env, jobject ref); + jint (JNICALL *EnsureLocalCapacity) + (JNIEnv *env, jint capacity); + + jobject (JNICALL *AllocObject) + (JNIEnv *env, jclass clazz); + jobject (JNICALL *NewObject) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jobject (JNICALL *NewObjectV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jobject (JNICALL *NewObjectA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + jclass (JNICALL *GetObjectClass) + (JNIEnv *env, jobject obj); + jboolean (JNICALL *IsInstanceOf) + (JNIEnv *env, jobject obj, jclass clazz); + + jmethodID (JNICALL *GetMethodID) + (JNIEnv *env, jclass clazz, const char *name, const char *sig); + + jobject (JNICALL *CallObjectMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + jobject (JNICALL *CallObjectMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + jobject (JNICALL *CallObjectMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue * args); + + jboolean (JNICALL *CallBooleanMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + jboolean (JNICALL *CallBooleanMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + jboolean (JNICALL *CallBooleanMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue * args); + + jbyte (JNICALL *CallByteMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + jbyte (JNICALL *CallByteMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + jbyte (JNICALL *CallByteMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue *args); + + jchar (JNICALL *CallCharMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + jchar (JNICALL *CallCharMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + jchar (JNICALL *CallCharMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue *args); + + jshort (JNICALL *CallShortMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + jshort (JNICALL *CallShortMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + jshort (JNICALL *CallShortMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue *args); + + jint (JNICALL *CallIntMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + jint (JNICALL *CallIntMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + jint (JNICALL *CallIntMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue *args); + + jlong (JNICALL *CallLongMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + jlong (JNICALL *CallLongMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + jlong (JNICALL *CallLongMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue *args); + + jfloat (JNICALL *CallFloatMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + jfloat (JNICALL *CallFloatMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + jfloat (JNICALL *CallFloatMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue *args); + + jdouble (JNICALL *CallDoubleMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + jdouble (JNICALL *CallDoubleMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + jdouble (JNICALL *CallDoubleMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue *args); + + void (JNICALL *CallVoidMethod) + (JNIEnv *env, jobject obj, jmethodID methodID, ...); + void (JNICALL *CallVoidMethodV) + (JNIEnv *env, jobject obj, jmethodID methodID, va_list args); + void (JNICALL *CallVoidMethodA) + (JNIEnv *env, jobject obj, jmethodID methodID, const jvalue * args); + + jobject (JNICALL *CallNonvirtualObjectMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + jobject (JNICALL *CallNonvirtualObjectMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + jobject (JNICALL *CallNonvirtualObjectMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue * args); + + jboolean (JNICALL *CallNonvirtualBooleanMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + jboolean (JNICALL *CallNonvirtualBooleanMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + jboolean (JNICALL *CallNonvirtualBooleanMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue * args); + + jbyte (JNICALL *CallNonvirtualByteMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + jbyte (JNICALL *CallNonvirtualByteMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + jbyte (JNICALL *CallNonvirtualByteMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue *args); + + jchar (JNICALL *CallNonvirtualCharMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + jchar (JNICALL *CallNonvirtualCharMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + jchar (JNICALL *CallNonvirtualCharMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue *args); + + jshort (JNICALL *CallNonvirtualShortMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + jshort (JNICALL *CallNonvirtualShortMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + jshort (JNICALL *CallNonvirtualShortMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue *args); + + jint (JNICALL *CallNonvirtualIntMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + jint (JNICALL *CallNonvirtualIntMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + jint (JNICALL *CallNonvirtualIntMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue *args); + + jlong (JNICALL *CallNonvirtualLongMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + jlong (JNICALL *CallNonvirtualLongMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + jlong (JNICALL *CallNonvirtualLongMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue *args); + + jfloat (JNICALL *CallNonvirtualFloatMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + jfloat (JNICALL *CallNonvirtualFloatMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + jfloat (JNICALL *CallNonvirtualFloatMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue *args); + + jdouble (JNICALL *CallNonvirtualDoubleMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + jdouble (JNICALL *CallNonvirtualDoubleMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + jdouble (JNICALL *CallNonvirtualDoubleMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue *args); + + void (JNICALL *CallNonvirtualVoidMethod) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, ...); + void (JNICALL *CallNonvirtualVoidMethodV) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + va_list args); + void (JNICALL *CallNonvirtualVoidMethodA) + (JNIEnv *env, jobject obj, jclass clazz, jmethodID methodID, + const jvalue * args); + + jfieldID (JNICALL *GetFieldID) + (JNIEnv *env, jclass clazz, const char *name, const char *sig); + + jobject (JNICALL *GetObjectField) + (JNIEnv *env, jobject obj, jfieldID fieldID); + jboolean (JNICALL *GetBooleanField) + (JNIEnv *env, jobject obj, jfieldID fieldID); + jbyte (JNICALL *GetByteField) + (JNIEnv *env, jobject obj, jfieldID fieldID); + jchar (JNICALL *GetCharField) + (JNIEnv *env, jobject obj, jfieldID fieldID); + jshort (JNICALL *GetShortField) + (JNIEnv *env, jobject obj, jfieldID fieldID); + jint (JNICALL *GetIntField) + (JNIEnv *env, jobject obj, jfieldID fieldID); + jlong (JNICALL *GetLongField) + (JNIEnv *env, jobject obj, jfieldID fieldID); + jfloat (JNICALL *GetFloatField) + (JNIEnv *env, jobject obj, jfieldID fieldID); + jdouble (JNICALL *GetDoubleField) + (JNIEnv *env, jobject obj, jfieldID fieldID); + + void (JNICALL *SetObjectField) + (JNIEnv *env, jobject obj, jfieldID fieldID, jobject val); + void (JNICALL *SetBooleanField) + (JNIEnv *env, jobject obj, jfieldID fieldID, jboolean val); + void (JNICALL *SetByteField) + (JNIEnv *env, jobject obj, jfieldID fieldID, jbyte val); + void (JNICALL *SetCharField) + (JNIEnv *env, jobject obj, jfieldID fieldID, jchar val); + void (JNICALL *SetShortField) + (JNIEnv *env, jobject obj, jfieldID fieldID, jshort val); + void (JNICALL *SetIntField) + (JNIEnv *env, jobject obj, jfieldID fieldID, jint val); + void (JNICALL *SetLongField) + (JNIEnv *env, jobject obj, jfieldID fieldID, jlong val); + void (JNICALL *SetFloatField) + (JNIEnv *env, jobject obj, jfieldID fieldID, jfloat val); + void (JNICALL *SetDoubleField) + (JNIEnv *env, jobject obj, jfieldID fieldID, jdouble val); + + jmethodID (JNICALL *GetStaticMethodID) + (JNIEnv *env, jclass clazz, const char *name, const char *sig); + + jobject (JNICALL *CallStaticObjectMethod) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jobject (JNICALL *CallStaticObjectMethodV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jobject (JNICALL *CallStaticObjectMethodA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + jboolean (JNICALL *CallStaticBooleanMethod) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jboolean (JNICALL *CallStaticBooleanMethodV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jboolean (JNICALL *CallStaticBooleanMethodA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + jbyte (JNICALL *CallStaticByteMethod) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jbyte (JNICALL *CallStaticByteMethodV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jbyte (JNICALL *CallStaticByteMethodA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + jchar (JNICALL *CallStaticCharMethod) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jchar (JNICALL *CallStaticCharMethodV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jchar (JNICALL *CallStaticCharMethodA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + jshort (JNICALL *CallStaticShortMethod) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jshort (JNICALL *CallStaticShortMethodV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jshort (JNICALL *CallStaticShortMethodA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + jint (JNICALL *CallStaticIntMethod) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jint (JNICALL *CallStaticIntMethodV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jint (JNICALL *CallStaticIntMethodA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + jlong (JNICALL *CallStaticLongMethod) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jlong (JNICALL *CallStaticLongMethodV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jlong (JNICALL *CallStaticLongMethodA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + jfloat (JNICALL *CallStaticFloatMethod) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jfloat (JNICALL *CallStaticFloatMethodV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jfloat (JNICALL *CallStaticFloatMethodA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + jdouble (JNICALL *CallStaticDoubleMethod) + (JNIEnv *env, jclass clazz, jmethodID methodID, ...); + jdouble (JNICALL *CallStaticDoubleMethodV) + (JNIEnv *env, jclass clazz, jmethodID methodID, va_list args); + jdouble (JNICALL *CallStaticDoubleMethodA) + (JNIEnv *env, jclass clazz, jmethodID methodID, const jvalue *args); + + void (JNICALL *CallStaticVoidMethod) + (JNIEnv *env, jclass cls, jmethodID methodID, ...); + void (JNICALL *CallStaticVoidMethodV) + (JNIEnv *env, jclass cls, jmethodID methodID, va_list args); + void (JNICALL *CallStaticVoidMethodA) + (JNIEnv *env, jclass cls, jmethodID methodID, const jvalue * args); + + jfieldID (JNICALL *GetStaticFieldID) + (JNIEnv *env, jclass clazz, const char *name, const char *sig); + jobject (JNICALL *GetStaticObjectField) + (JNIEnv *env, jclass clazz, jfieldID fieldID); + jboolean (JNICALL *GetStaticBooleanField) + (JNIEnv *env, jclass clazz, jfieldID fieldID); + jbyte (JNICALL *GetStaticByteField) + (JNIEnv *env, jclass clazz, jfieldID fieldID); + jchar (JNICALL *GetStaticCharField) + (JNIEnv *env, jclass clazz, jfieldID fieldID); + jshort (JNICALL *GetStaticShortField) + (JNIEnv *env, jclass clazz, jfieldID fieldID); + jint (JNICALL *GetStaticIntField) + (JNIEnv *env, jclass clazz, jfieldID fieldID); + jlong (JNICALL *GetStaticLongField) + (JNIEnv *env, jclass clazz, jfieldID fieldID); + jfloat (JNICALL *GetStaticFloatField) + (JNIEnv *env, jclass clazz, jfieldID fieldID); + jdouble (JNICALL *GetStaticDoubleField) + (JNIEnv *env, jclass clazz, jfieldID fieldID); + + void (JNICALL *SetStaticObjectField) + (JNIEnv *env, jclass clazz, jfieldID fieldID, jobject value); + void (JNICALL *SetStaticBooleanField) + (JNIEnv *env, jclass clazz, jfieldID fieldID, jboolean value); + void (JNICALL *SetStaticByteField) + (JNIEnv *env, jclass clazz, jfieldID fieldID, jbyte value); + void (JNICALL *SetStaticCharField) + (JNIEnv *env, jclass clazz, jfieldID fieldID, jchar value); + void (JNICALL *SetStaticShortField) + (JNIEnv *env, jclass clazz, jfieldID fieldID, jshort value); + void (JNICALL *SetStaticIntField) + (JNIEnv *env, jclass clazz, jfieldID fieldID, jint value); + void (JNICALL *SetStaticLongField) + (JNIEnv *env, jclass clazz, jfieldID fieldID, jlong value); + void (JNICALL *SetStaticFloatField) + (JNIEnv *env, jclass clazz, jfieldID fieldID, jfloat value); + void (JNICALL *SetStaticDoubleField) + (JNIEnv *env, jclass clazz, jfieldID fieldID, jdouble value); + + jstring (JNICALL *NewString) + (JNIEnv *env, const jchar *unicode, jsize len); + jsize (JNICALL *GetStringLength) + (JNIEnv *env, jstring str); + const jchar *(JNICALL *GetStringChars) + (JNIEnv *env, jstring str, jboolean *isCopy); + void (JNICALL *ReleaseStringChars) + (JNIEnv *env, jstring str, const jchar *chars); + + jstring (JNICALL *NewStringUTF) + (JNIEnv *env, const char *utf); + jsize (JNICALL *GetStringUTFLength) + (JNIEnv *env, jstring str); + const char* (JNICALL *GetStringUTFChars) + (JNIEnv *env, jstring str, jboolean *isCopy); + void (JNICALL *ReleaseStringUTFChars) + (JNIEnv *env, jstring str, const char* chars); + + + jsize (JNICALL *GetArrayLength) + (JNIEnv *env, jarray array); + + jobjectArray (JNICALL *NewObjectArray) + (JNIEnv *env, jsize len, jclass clazz, jobject init); + jobject (JNICALL *GetObjectArrayElement) + (JNIEnv *env, jobjectArray array, jsize index); + void (JNICALL *SetObjectArrayElement) + (JNIEnv *env, jobjectArray array, jsize index, jobject val); + + jbooleanArray (JNICALL *NewBooleanArray) + (JNIEnv *env, jsize len); + jbyteArray (JNICALL *NewByteArray) + (JNIEnv *env, jsize len); + jcharArray (JNICALL *NewCharArray) + (JNIEnv *env, jsize len); + jshortArray (JNICALL *NewShortArray) + (JNIEnv *env, jsize len); + jintArray (JNICALL *NewIntArray) + (JNIEnv *env, jsize len); + jlongArray (JNICALL *NewLongArray) + (JNIEnv *env, jsize len); + jfloatArray (JNICALL *NewFloatArray) + (JNIEnv *env, jsize len); + jdoubleArray (JNICALL *NewDoubleArray) + (JNIEnv *env, jsize len); + + jboolean * (JNICALL *GetBooleanArrayElements) + (JNIEnv *env, jbooleanArray array, jboolean *isCopy); + jbyte * (JNICALL *GetByteArrayElements) + (JNIEnv *env, jbyteArray array, jboolean *isCopy); + jchar * (JNICALL *GetCharArrayElements) + (JNIEnv *env, jcharArray array, jboolean *isCopy); + jshort * (JNICALL *GetShortArrayElements) + (JNIEnv *env, jshortArray array, jboolean *isCopy); + jint * (JNICALL *GetIntArrayElements) + (JNIEnv *env, jintArray array, jboolean *isCopy); + jlong * (JNICALL *GetLongArrayElements) + (JNIEnv *env, jlongArray array, jboolean *isCopy); + jfloat * (JNICALL *GetFloatArrayElements) + (JNIEnv *env, jfloatArray array, jboolean *isCopy); + jdouble * (JNICALL *GetDoubleArrayElements) + (JNIEnv *env, jdoubleArray array, jboolean *isCopy); + + void (JNICALL *ReleaseBooleanArrayElements) + (JNIEnv *env, jbooleanArray array, jboolean *elems, jint mode); + void (JNICALL *ReleaseByteArrayElements) + (JNIEnv *env, jbyteArray array, jbyte *elems, jint mode); + void (JNICALL *ReleaseCharArrayElements) + (JNIEnv *env, jcharArray array, jchar *elems, jint mode); + void (JNICALL *ReleaseShortArrayElements) + (JNIEnv *env, jshortArray array, jshort *elems, jint mode); + void (JNICALL *ReleaseIntArrayElements) + (JNIEnv *env, jintArray array, jint *elems, jint mode); + void (JNICALL *ReleaseLongArrayElements) + (JNIEnv *env, jlongArray array, jlong *elems, jint mode); + void (JNICALL *ReleaseFloatArrayElements) + (JNIEnv *env, jfloatArray array, jfloat *elems, jint mode); + void (JNICALL *ReleaseDoubleArrayElements) + (JNIEnv *env, jdoubleArray array, jdouble *elems, jint mode); + + void (JNICALL *GetBooleanArrayRegion) + (JNIEnv *env, jbooleanArray array, jsize start, jsize l, jboolean *buf); + void (JNICALL *GetByteArrayRegion) + (JNIEnv *env, jbyteArray array, jsize start, jsize len, jbyte *buf); + void (JNICALL *GetCharArrayRegion) + (JNIEnv *env, jcharArray array, jsize start, jsize len, jchar *buf); + void (JNICALL *GetShortArrayRegion) + (JNIEnv *env, jshortArray array, jsize start, jsize len, jshort *buf); + void (JNICALL *GetIntArrayRegion) + (JNIEnv *env, jintArray array, jsize start, jsize len, jint *buf); + void (JNICALL *GetLongArrayRegion) + (JNIEnv *env, jlongArray array, jsize start, jsize len, jlong *buf); + void (JNICALL *GetFloatArrayRegion) + (JNIEnv *env, jfloatArray array, jsize start, jsize len, jfloat *buf); + void (JNICALL *GetDoubleArrayRegion) + (JNIEnv *env, jdoubleArray array, jsize start, jsize len, jdouble *buf); + + void (JNICALL *SetBooleanArrayRegion) + (JNIEnv *env, jbooleanArray array, jsize start, jsize l, const jboolean *buf); + void (JNICALL *SetByteArrayRegion) + (JNIEnv *env, jbyteArray array, jsize start, jsize len, const jbyte *buf); + void (JNICALL *SetCharArrayRegion) + (JNIEnv *env, jcharArray array, jsize start, jsize len, const jchar *buf); + void (JNICALL *SetShortArrayRegion) + (JNIEnv *env, jshortArray array, jsize start, jsize len, const jshort *buf); + void (JNICALL *SetIntArrayRegion) + (JNIEnv *env, jintArray array, jsize start, jsize len, const jint *buf); + void (JNICALL *SetLongArrayRegion) + (JNIEnv *env, jlongArray array, jsize start, jsize len, const jlong *buf); + void (JNICALL *SetFloatArrayRegion) + (JNIEnv *env, jfloatArray array, jsize start, jsize len, const jfloat *buf); + void (JNICALL *SetDoubleArrayRegion) + (JNIEnv *env, jdoubleArray array, jsize start, jsize len, const jdouble *buf); + + jint (JNICALL *RegisterNatives) + (JNIEnv *env, jclass clazz, const JNINativeMethod *methods, + jint nMethods); + jint (JNICALL *UnregisterNatives) + (JNIEnv *env, jclass clazz); + + jint (JNICALL *MonitorEnter) + (JNIEnv *env, jobject obj); + jint (JNICALL *MonitorExit) + (JNIEnv *env, jobject obj); + + jint (JNICALL *GetJavaVM) + (JNIEnv *env, JavaVM **vm); + + void (JNICALL *GetStringRegion) + (JNIEnv *env, jstring str, jsize start, jsize len, jchar *buf); + void (JNICALL *GetStringUTFRegion) + (JNIEnv *env, jstring str, jsize start, jsize len, char *buf); + + void * (JNICALL *GetPrimitiveArrayCritical) + (JNIEnv *env, jarray array, jboolean *isCopy); + void (JNICALL *ReleasePrimitiveArrayCritical) + (JNIEnv *env, jarray array, void *carray, jint mode); + + const jchar * (JNICALL *GetStringCritical) + (JNIEnv *env, jstring string, jboolean *isCopy); + void (JNICALL *ReleaseStringCritical) + (JNIEnv *env, jstring string, const jchar *cstring); + + jweak (JNICALL *NewWeakGlobalRef) + (JNIEnv *env, jobject obj); + void (JNICALL *DeleteWeakGlobalRef) + (JNIEnv *env, jweak ref); + + jboolean (JNICALL *ExceptionCheck) + (JNIEnv *env); + + jobject (JNICALL *NewDirectByteBuffer) + (JNIEnv* env, void* address, jlong capacity); + void* (JNICALL *GetDirectBufferAddress) + (JNIEnv* env, jobject buf); + jlong (JNICALL *GetDirectBufferCapacity) + (JNIEnv* env, jobject buf); + + /* New JNI 1.6 Features */ + + jobjectRefType (JNICALL *GetObjectRefType) + (JNIEnv* env, jobject obj); + + /* Module Features */ + + jobject (JNICALL *GetModule) + (JNIEnv* env, jclass clazz); +}; + +/* + * We use inlined functions for C++ so that programmers can write: + * + * env->FindClass("java/lang/String") + * + * in C++ rather than: + * + * (*env)->FindClass(env, "java/lang/String") + * + * in C. + */ + +struct JNIEnv_ { + const struct JNINativeInterface_ *functions; +#ifdef __cplusplus + + jint GetVersion() { + return functions->GetVersion(this); + } + jclass DefineClass(const char *name, jobject loader, const jbyte *buf, + jsize len) { + return functions->DefineClass(this, name, loader, buf, len); + } + jclass FindClass(const char *name) { + return functions->FindClass(this, name); + } + jmethodID FromReflectedMethod(jobject method) { + return functions->FromReflectedMethod(this,method); + } + jfieldID FromReflectedField(jobject field) { + return functions->FromReflectedField(this,field); + } + + jobject ToReflectedMethod(jclass cls, jmethodID methodID, jboolean isStatic) { + return functions->ToReflectedMethod(this, cls, methodID, isStatic); + } + + jclass GetSuperclass(jclass sub) { + return functions->GetSuperclass(this, sub); + } + jboolean IsAssignableFrom(jclass sub, jclass sup) { + return functions->IsAssignableFrom(this, sub, sup); + } + + jobject ToReflectedField(jclass cls, jfieldID fieldID, jboolean isStatic) { + return functions->ToReflectedField(this,cls,fieldID,isStatic); + } + + jint Throw(jthrowable obj) { + return functions->Throw(this, obj); + } + jint ThrowNew(jclass clazz, const char *msg) { + return functions->ThrowNew(this, clazz, msg); + } + jthrowable ExceptionOccurred() { + return functions->ExceptionOccurred(this); + } + void ExceptionDescribe() { + functions->ExceptionDescribe(this); + } + void ExceptionClear() { + functions->ExceptionClear(this); + } + void FatalError(const char *msg) { + functions->FatalError(this, msg); + } + + jint PushLocalFrame(jint capacity) { + return functions->PushLocalFrame(this,capacity); + } + jobject PopLocalFrame(jobject result) { + return functions->PopLocalFrame(this,result); + } + + jobject NewGlobalRef(jobject lobj) { + return functions->NewGlobalRef(this,lobj); + } + void DeleteGlobalRef(jobject gref) { + functions->DeleteGlobalRef(this,gref); + } + void DeleteLocalRef(jobject obj) { + functions->DeleteLocalRef(this, obj); + } + + jboolean IsSameObject(jobject obj1, jobject obj2) { + return functions->IsSameObject(this,obj1,obj2); + } + + jobject NewLocalRef(jobject ref) { + return functions->NewLocalRef(this,ref); + } + jint EnsureLocalCapacity(jint capacity) { + return functions->EnsureLocalCapacity(this,capacity); + } + + jobject AllocObject(jclass clazz) { + return functions->AllocObject(this,clazz); + } + jobject NewObject(jclass clazz, jmethodID methodID, ...) { + va_list args; + jobject result; + va_start(args, methodID); + result = functions->NewObjectV(this,clazz,methodID,args); + va_end(args); + return result; + } + jobject NewObjectV(jclass clazz, jmethodID methodID, + va_list args) { + return functions->NewObjectV(this,clazz,methodID,args); + } + jobject NewObjectA(jclass clazz, jmethodID methodID, + const jvalue *args) { + return functions->NewObjectA(this,clazz,methodID,args); + } + + jclass GetObjectClass(jobject obj) { + return functions->GetObjectClass(this,obj); + } + jboolean IsInstanceOf(jobject obj, jclass clazz) { + return functions->IsInstanceOf(this,obj,clazz); + } + + jmethodID GetMethodID(jclass clazz, const char *name, + const char *sig) { + return functions->GetMethodID(this,clazz,name,sig); + } + + jobject CallObjectMethod(jobject obj, jmethodID methodID, ...) { + va_list args; + jobject result; + va_start(args,methodID); + result = functions->CallObjectMethodV(this,obj,methodID,args); + va_end(args); + return result; + } + jobject CallObjectMethodV(jobject obj, jmethodID methodID, + va_list args) { + return functions->CallObjectMethodV(this,obj,methodID,args); + } + jobject CallObjectMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + return functions->CallObjectMethodA(this,obj,methodID,args); + } + + jboolean CallBooleanMethod(jobject obj, + jmethodID methodID, ...) { + va_list args; + jboolean result; + va_start(args,methodID); + result = functions->CallBooleanMethodV(this,obj,methodID,args); + va_end(args); + return result; + } + jboolean CallBooleanMethodV(jobject obj, jmethodID methodID, + va_list args) { + return functions->CallBooleanMethodV(this,obj,methodID,args); + } + jboolean CallBooleanMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + return functions->CallBooleanMethodA(this,obj,methodID, args); + } + + jbyte CallByteMethod(jobject obj, jmethodID methodID, ...) { + va_list args; + jbyte result; + va_start(args,methodID); + result = functions->CallByteMethodV(this,obj,methodID,args); + va_end(args); + return result; + } + jbyte CallByteMethodV(jobject obj, jmethodID methodID, + va_list args) { + return functions->CallByteMethodV(this,obj,methodID,args); + } + jbyte CallByteMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + return functions->CallByteMethodA(this,obj,methodID,args); + } + + jchar CallCharMethod(jobject obj, jmethodID methodID, ...) { + va_list args; + jchar result; + va_start(args,methodID); + result = functions->CallCharMethodV(this,obj,methodID,args); + va_end(args); + return result; + } + jchar CallCharMethodV(jobject obj, jmethodID methodID, + va_list args) { + return functions->CallCharMethodV(this,obj,methodID,args); + } + jchar CallCharMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + return functions->CallCharMethodA(this,obj,methodID,args); + } + + jshort CallShortMethod(jobject obj, jmethodID methodID, ...) { + va_list args; + jshort result; + va_start(args,methodID); + result = functions->CallShortMethodV(this,obj,methodID,args); + va_end(args); + return result; + } + jshort CallShortMethodV(jobject obj, jmethodID methodID, + va_list args) { + return functions->CallShortMethodV(this,obj,methodID,args); + } + jshort CallShortMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + return functions->CallShortMethodA(this,obj,methodID,args); + } + + jint CallIntMethod(jobject obj, jmethodID methodID, ...) { + va_list args; + jint result; + va_start(args,methodID); + result = functions->CallIntMethodV(this,obj,methodID,args); + va_end(args); + return result; + } + jint CallIntMethodV(jobject obj, jmethodID methodID, + va_list args) { + return functions->CallIntMethodV(this,obj,methodID,args); + } + jint CallIntMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + return functions->CallIntMethodA(this,obj,methodID,args); + } + + jlong CallLongMethod(jobject obj, jmethodID methodID, ...) { + va_list args; + jlong result; + va_start(args,methodID); + result = functions->CallLongMethodV(this,obj,methodID,args); + va_end(args); + return result; + } + jlong CallLongMethodV(jobject obj, jmethodID methodID, + va_list args) { + return functions->CallLongMethodV(this,obj,methodID,args); + } + jlong CallLongMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + return functions->CallLongMethodA(this,obj,methodID,args); + } + + jfloat CallFloatMethod(jobject obj, jmethodID methodID, ...) { + va_list args; + jfloat result; + va_start(args,methodID); + result = functions->CallFloatMethodV(this,obj,methodID,args); + va_end(args); + return result; + } + jfloat CallFloatMethodV(jobject obj, jmethodID methodID, + va_list args) { + return functions->CallFloatMethodV(this,obj,methodID,args); + } + jfloat CallFloatMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + return functions->CallFloatMethodA(this,obj,methodID,args); + } + + jdouble CallDoubleMethod(jobject obj, jmethodID methodID, ...) { + va_list args; + jdouble result; + va_start(args,methodID); + result = functions->CallDoubleMethodV(this,obj,methodID,args); + va_end(args); + return result; + } + jdouble CallDoubleMethodV(jobject obj, jmethodID methodID, + va_list args) { + return functions->CallDoubleMethodV(this,obj,methodID,args); + } + jdouble CallDoubleMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + return functions->CallDoubleMethodA(this,obj,methodID,args); + } + + void CallVoidMethod(jobject obj, jmethodID methodID, ...) { + va_list args; + va_start(args,methodID); + functions->CallVoidMethodV(this,obj,methodID,args); + va_end(args); + } + void CallVoidMethodV(jobject obj, jmethodID methodID, + va_list args) { + functions->CallVoidMethodV(this,obj,methodID,args); + } + void CallVoidMethodA(jobject obj, jmethodID methodID, + const jvalue * args) { + functions->CallVoidMethodA(this,obj,methodID,args); + } + + jobject CallNonvirtualObjectMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + jobject result; + va_start(args,methodID); + result = functions->CallNonvirtualObjectMethodV(this,obj,clazz, + methodID,args); + va_end(args); + return result; + } + jobject CallNonvirtualObjectMethodV(jobject obj, jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallNonvirtualObjectMethodV(this,obj,clazz, + methodID,args); + } + jobject CallNonvirtualObjectMethodA(jobject obj, jclass clazz, + jmethodID methodID, const jvalue * args) { + return functions->CallNonvirtualObjectMethodA(this,obj,clazz, + methodID,args); + } + + jboolean CallNonvirtualBooleanMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + jboolean result; + va_start(args,methodID); + result = functions->CallNonvirtualBooleanMethodV(this,obj,clazz, + methodID,args); + va_end(args); + return result; + } + jboolean CallNonvirtualBooleanMethodV(jobject obj, jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallNonvirtualBooleanMethodV(this,obj,clazz, + methodID,args); + } + jboolean CallNonvirtualBooleanMethodA(jobject obj, jclass clazz, + jmethodID methodID, const jvalue * args) { + return functions->CallNonvirtualBooleanMethodA(this,obj,clazz, + methodID, args); + } + + jbyte CallNonvirtualByteMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + jbyte result; + va_start(args,methodID); + result = functions->CallNonvirtualByteMethodV(this,obj,clazz, + methodID,args); + va_end(args); + return result; + } + jbyte CallNonvirtualByteMethodV(jobject obj, jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallNonvirtualByteMethodV(this,obj,clazz, + methodID,args); + } + jbyte CallNonvirtualByteMethodA(jobject obj, jclass clazz, + jmethodID methodID, const jvalue * args) { + return functions->CallNonvirtualByteMethodA(this,obj,clazz, + methodID,args); + } + + jchar CallNonvirtualCharMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + jchar result; + va_start(args,methodID); + result = functions->CallNonvirtualCharMethodV(this,obj,clazz, + methodID,args); + va_end(args); + return result; + } + jchar CallNonvirtualCharMethodV(jobject obj, jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallNonvirtualCharMethodV(this,obj,clazz, + methodID,args); + } + jchar CallNonvirtualCharMethodA(jobject obj, jclass clazz, + jmethodID methodID, const jvalue * args) { + return functions->CallNonvirtualCharMethodA(this,obj,clazz, + methodID,args); + } + + jshort CallNonvirtualShortMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + jshort result; + va_start(args,methodID); + result = functions->CallNonvirtualShortMethodV(this,obj,clazz, + methodID,args); + va_end(args); + return result; + } + jshort CallNonvirtualShortMethodV(jobject obj, jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallNonvirtualShortMethodV(this,obj,clazz, + methodID,args); + } + jshort CallNonvirtualShortMethodA(jobject obj, jclass clazz, + jmethodID methodID, const jvalue * args) { + return functions->CallNonvirtualShortMethodA(this,obj,clazz, + methodID,args); + } + + jint CallNonvirtualIntMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + jint result; + va_start(args,methodID); + result = functions->CallNonvirtualIntMethodV(this,obj,clazz, + methodID,args); + va_end(args); + return result; + } + jint CallNonvirtualIntMethodV(jobject obj, jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallNonvirtualIntMethodV(this,obj,clazz, + methodID,args); + } + jint CallNonvirtualIntMethodA(jobject obj, jclass clazz, + jmethodID methodID, const jvalue * args) { + return functions->CallNonvirtualIntMethodA(this,obj,clazz, + methodID,args); + } + + jlong CallNonvirtualLongMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + jlong result; + va_start(args,methodID); + result = functions->CallNonvirtualLongMethodV(this,obj,clazz, + methodID,args); + va_end(args); + return result; + } + jlong CallNonvirtualLongMethodV(jobject obj, jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallNonvirtualLongMethodV(this,obj,clazz, + methodID,args); + } + jlong CallNonvirtualLongMethodA(jobject obj, jclass clazz, + jmethodID methodID, const jvalue * args) { + return functions->CallNonvirtualLongMethodA(this,obj,clazz, + methodID,args); + } + + jfloat CallNonvirtualFloatMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + jfloat result; + va_start(args,methodID); + result = functions->CallNonvirtualFloatMethodV(this,obj,clazz, + methodID,args); + va_end(args); + return result; + } + jfloat CallNonvirtualFloatMethodV(jobject obj, jclass clazz, + jmethodID methodID, + va_list args) { + return functions->CallNonvirtualFloatMethodV(this,obj,clazz, + methodID,args); + } + jfloat CallNonvirtualFloatMethodA(jobject obj, jclass clazz, + jmethodID methodID, + const jvalue * args) { + return functions->CallNonvirtualFloatMethodA(this,obj,clazz, + methodID,args); + } + + jdouble CallNonvirtualDoubleMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + jdouble result; + va_start(args,methodID); + result = functions->CallNonvirtualDoubleMethodV(this,obj,clazz, + methodID,args); + va_end(args); + return result; + } + jdouble CallNonvirtualDoubleMethodV(jobject obj, jclass clazz, + jmethodID methodID, + va_list args) { + return functions->CallNonvirtualDoubleMethodV(this,obj,clazz, + methodID,args); + } + jdouble CallNonvirtualDoubleMethodA(jobject obj, jclass clazz, + jmethodID methodID, + const jvalue * args) { + return functions->CallNonvirtualDoubleMethodA(this,obj,clazz, + methodID,args); + } + + void CallNonvirtualVoidMethod(jobject obj, jclass clazz, + jmethodID methodID, ...) { + va_list args; + va_start(args,methodID); + functions->CallNonvirtualVoidMethodV(this,obj,clazz,methodID,args); + va_end(args); + } + void CallNonvirtualVoidMethodV(jobject obj, jclass clazz, + jmethodID methodID, + va_list args) { + functions->CallNonvirtualVoidMethodV(this,obj,clazz,methodID,args); + } + void CallNonvirtualVoidMethodA(jobject obj, jclass clazz, + jmethodID methodID, + const jvalue * args) { + functions->CallNonvirtualVoidMethodA(this,obj,clazz,methodID,args); + } + + jfieldID GetFieldID(jclass clazz, const char *name, + const char *sig) { + return functions->GetFieldID(this,clazz,name,sig); + } + + jobject GetObjectField(jobject obj, jfieldID fieldID) { + return functions->GetObjectField(this,obj,fieldID); + } + jboolean GetBooleanField(jobject obj, jfieldID fieldID) { + return functions->GetBooleanField(this,obj,fieldID); + } + jbyte GetByteField(jobject obj, jfieldID fieldID) { + return functions->GetByteField(this,obj,fieldID); + } + jchar GetCharField(jobject obj, jfieldID fieldID) { + return functions->GetCharField(this,obj,fieldID); + } + jshort GetShortField(jobject obj, jfieldID fieldID) { + return functions->GetShortField(this,obj,fieldID); + } + jint GetIntField(jobject obj, jfieldID fieldID) { + return functions->GetIntField(this,obj,fieldID); + } + jlong GetLongField(jobject obj, jfieldID fieldID) { + return functions->GetLongField(this,obj,fieldID); + } + jfloat GetFloatField(jobject obj, jfieldID fieldID) { + return functions->GetFloatField(this,obj,fieldID); + } + jdouble GetDoubleField(jobject obj, jfieldID fieldID) { + return functions->GetDoubleField(this,obj,fieldID); + } + + void SetObjectField(jobject obj, jfieldID fieldID, jobject val) { + functions->SetObjectField(this,obj,fieldID,val); + } + void SetBooleanField(jobject obj, jfieldID fieldID, + jboolean val) { + functions->SetBooleanField(this,obj,fieldID,val); + } + void SetByteField(jobject obj, jfieldID fieldID, + jbyte val) { + functions->SetByteField(this,obj,fieldID,val); + } + void SetCharField(jobject obj, jfieldID fieldID, + jchar val) { + functions->SetCharField(this,obj,fieldID,val); + } + void SetShortField(jobject obj, jfieldID fieldID, + jshort val) { + functions->SetShortField(this,obj,fieldID,val); + } + void SetIntField(jobject obj, jfieldID fieldID, + jint val) { + functions->SetIntField(this,obj,fieldID,val); + } + void SetLongField(jobject obj, jfieldID fieldID, + jlong val) { + functions->SetLongField(this,obj,fieldID,val); + } + void SetFloatField(jobject obj, jfieldID fieldID, + jfloat val) { + functions->SetFloatField(this,obj,fieldID,val); + } + void SetDoubleField(jobject obj, jfieldID fieldID, + jdouble val) { + functions->SetDoubleField(this,obj,fieldID,val); + } + + jmethodID GetStaticMethodID(jclass clazz, const char *name, + const char *sig) { + return functions->GetStaticMethodID(this,clazz,name,sig); + } + + jobject CallStaticObjectMethod(jclass clazz, jmethodID methodID, + ...) { + va_list args; + jobject result; + va_start(args,methodID); + result = functions->CallStaticObjectMethodV(this,clazz,methodID,args); + va_end(args); + return result; + } + jobject CallStaticObjectMethodV(jclass clazz, jmethodID methodID, + va_list args) { + return functions->CallStaticObjectMethodV(this,clazz,methodID,args); + } + jobject CallStaticObjectMethodA(jclass clazz, jmethodID methodID, + const jvalue *args) { + return functions->CallStaticObjectMethodA(this,clazz,methodID,args); + } + + jboolean CallStaticBooleanMethod(jclass clazz, + jmethodID methodID, ...) { + va_list args; + jboolean result; + va_start(args,methodID); + result = functions->CallStaticBooleanMethodV(this,clazz,methodID,args); + va_end(args); + return result; + } + jboolean CallStaticBooleanMethodV(jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallStaticBooleanMethodV(this,clazz,methodID,args); + } + jboolean CallStaticBooleanMethodA(jclass clazz, + jmethodID methodID, const jvalue *args) { + return functions->CallStaticBooleanMethodA(this,clazz,methodID,args); + } + + jbyte CallStaticByteMethod(jclass clazz, + jmethodID methodID, ...) { + va_list args; + jbyte result; + va_start(args,methodID); + result = functions->CallStaticByteMethodV(this,clazz,methodID,args); + va_end(args); + return result; + } + jbyte CallStaticByteMethodV(jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallStaticByteMethodV(this,clazz,methodID,args); + } + jbyte CallStaticByteMethodA(jclass clazz, + jmethodID methodID, const jvalue *args) { + return functions->CallStaticByteMethodA(this,clazz,methodID,args); + } + + jchar CallStaticCharMethod(jclass clazz, + jmethodID methodID, ...) { + va_list args; + jchar result; + va_start(args,methodID); + result = functions->CallStaticCharMethodV(this,clazz,methodID,args); + va_end(args); + return result; + } + jchar CallStaticCharMethodV(jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallStaticCharMethodV(this,clazz,methodID,args); + } + jchar CallStaticCharMethodA(jclass clazz, + jmethodID methodID, const jvalue *args) { + return functions->CallStaticCharMethodA(this,clazz,methodID,args); + } + + jshort CallStaticShortMethod(jclass clazz, + jmethodID methodID, ...) { + va_list args; + jshort result; + va_start(args,methodID); + result = functions->CallStaticShortMethodV(this,clazz,methodID,args); + va_end(args); + return result; + } + jshort CallStaticShortMethodV(jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallStaticShortMethodV(this,clazz,methodID,args); + } + jshort CallStaticShortMethodA(jclass clazz, + jmethodID methodID, const jvalue *args) { + return functions->CallStaticShortMethodA(this,clazz,methodID,args); + } + + jint CallStaticIntMethod(jclass clazz, + jmethodID methodID, ...) { + va_list args; + jint result; + va_start(args,methodID); + result = functions->CallStaticIntMethodV(this,clazz,methodID,args); + va_end(args); + return result; + } + jint CallStaticIntMethodV(jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallStaticIntMethodV(this,clazz,methodID,args); + } + jint CallStaticIntMethodA(jclass clazz, + jmethodID methodID, const jvalue *args) { + return functions->CallStaticIntMethodA(this,clazz,methodID,args); + } + + jlong CallStaticLongMethod(jclass clazz, + jmethodID methodID, ...) { + va_list args; + jlong result; + va_start(args,methodID); + result = functions->CallStaticLongMethodV(this,clazz,methodID,args); + va_end(args); + return result; + } + jlong CallStaticLongMethodV(jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallStaticLongMethodV(this,clazz,methodID,args); + } + jlong CallStaticLongMethodA(jclass clazz, + jmethodID methodID, const jvalue *args) { + return functions->CallStaticLongMethodA(this,clazz,methodID,args); + } + + jfloat CallStaticFloatMethod(jclass clazz, + jmethodID methodID, ...) { + va_list args; + jfloat result; + va_start(args,methodID); + result = functions->CallStaticFloatMethodV(this,clazz,methodID,args); + va_end(args); + return result; + } + jfloat CallStaticFloatMethodV(jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallStaticFloatMethodV(this,clazz,methodID,args); + } + jfloat CallStaticFloatMethodA(jclass clazz, + jmethodID methodID, const jvalue *args) { + return functions->CallStaticFloatMethodA(this,clazz,methodID,args); + } + + jdouble CallStaticDoubleMethod(jclass clazz, + jmethodID methodID, ...) { + va_list args; + jdouble result; + va_start(args,methodID); + result = functions->CallStaticDoubleMethodV(this,clazz,methodID,args); + va_end(args); + return result; + } + jdouble CallStaticDoubleMethodV(jclass clazz, + jmethodID methodID, va_list args) { + return functions->CallStaticDoubleMethodV(this,clazz,methodID,args); + } + jdouble CallStaticDoubleMethodA(jclass clazz, + jmethodID methodID, const jvalue *args) { + return functions->CallStaticDoubleMethodA(this,clazz,methodID,args); + } + + void CallStaticVoidMethod(jclass cls, jmethodID methodID, ...) { + va_list args; + va_start(args,methodID); + functions->CallStaticVoidMethodV(this,cls,methodID,args); + va_end(args); + } + void CallStaticVoidMethodV(jclass cls, jmethodID methodID, + va_list args) { + functions->CallStaticVoidMethodV(this,cls,methodID,args); + } + void CallStaticVoidMethodA(jclass cls, jmethodID methodID, + const jvalue * args) { + functions->CallStaticVoidMethodA(this,cls,methodID,args); + } + + jfieldID GetStaticFieldID(jclass clazz, const char *name, + const char *sig) { + return functions->GetStaticFieldID(this,clazz,name,sig); + } + jobject GetStaticObjectField(jclass clazz, jfieldID fieldID) { + return functions->GetStaticObjectField(this,clazz,fieldID); + } + jboolean GetStaticBooleanField(jclass clazz, jfieldID fieldID) { + return functions->GetStaticBooleanField(this,clazz,fieldID); + } + jbyte GetStaticByteField(jclass clazz, jfieldID fieldID) { + return functions->GetStaticByteField(this,clazz,fieldID); + } + jchar GetStaticCharField(jclass clazz, jfieldID fieldID) { + return functions->GetStaticCharField(this,clazz,fieldID); + } + jshort GetStaticShortField(jclass clazz, jfieldID fieldID) { + return functions->GetStaticShortField(this,clazz,fieldID); + } + jint GetStaticIntField(jclass clazz, jfieldID fieldID) { + return functions->GetStaticIntField(this,clazz,fieldID); + } + jlong GetStaticLongField(jclass clazz, jfieldID fieldID) { + return functions->GetStaticLongField(this,clazz,fieldID); + } + jfloat GetStaticFloatField(jclass clazz, jfieldID fieldID) { + return functions->GetStaticFloatField(this,clazz,fieldID); + } + jdouble GetStaticDoubleField(jclass clazz, jfieldID fieldID) { + return functions->GetStaticDoubleField(this,clazz,fieldID); + } + + void SetStaticObjectField(jclass clazz, jfieldID fieldID, + jobject value) { + functions->SetStaticObjectField(this,clazz,fieldID,value); + } + void SetStaticBooleanField(jclass clazz, jfieldID fieldID, + jboolean value) { + functions->SetStaticBooleanField(this,clazz,fieldID,value); + } + void SetStaticByteField(jclass clazz, jfieldID fieldID, + jbyte value) { + functions->SetStaticByteField(this,clazz,fieldID,value); + } + void SetStaticCharField(jclass clazz, jfieldID fieldID, + jchar value) { + functions->SetStaticCharField(this,clazz,fieldID,value); + } + void SetStaticShortField(jclass clazz, jfieldID fieldID, + jshort value) { + functions->SetStaticShortField(this,clazz,fieldID,value); + } + void SetStaticIntField(jclass clazz, jfieldID fieldID, + jint value) { + functions->SetStaticIntField(this,clazz,fieldID,value); + } + void SetStaticLongField(jclass clazz, jfieldID fieldID, + jlong value) { + functions->SetStaticLongField(this,clazz,fieldID,value); + } + void SetStaticFloatField(jclass clazz, jfieldID fieldID, + jfloat value) { + functions->SetStaticFloatField(this,clazz,fieldID,value); + } + void SetStaticDoubleField(jclass clazz, jfieldID fieldID, + jdouble value) { + functions->SetStaticDoubleField(this,clazz,fieldID,value); + } + + jstring NewString(const jchar *unicode, jsize len) { + return functions->NewString(this,unicode,len); + } + jsize GetStringLength(jstring str) { + return functions->GetStringLength(this,str); + } + const jchar *GetStringChars(jstring str, jboolean *isCopy) { + return functions->GetStringChars(this,str,isCopy); + } + void ReleaseStringChars(jstring str, const jchar *chars) { + functions->ReleaseStringChars(this,str,chars); + } + + jstring NewStringUTF(const char *utf) { + return functions->NewStringUTF(this,utf); + } + jsize GetStringUTFLength(jstring str) { + return functions->GetStringUTFLength(this,str); + } + const char* GetStringUTFChars(jstring str, jboolean *isCopy) { + return functions->GetStringUTFChars(this,str,isCopy); + } + void ReleaseStringUTFChars(jstring str, const char* chars) { + functions->ReleaseStringUTFChars(this,str,chars); + } + + jsize GetArrayLength(jarray array) { + return functions->GetArrayLength(this,array); + } + + jobjectArray NewObjectArray(jsize len, jclass clazz, + jobject init) { + return functions->NewObjectArray(this,len,clazz,init); + } + jobject GetObjectArrayElement(jobjectArray array, jsize index) { + return functions->GetObjectArrayElement(this,array,index); + } + void SetObjectArrayElement(jobjectArray array, jsize index, + jobject val) { + functions->SetObjectArrayElement(this,array,index,val); + } + + jbooleanArray NewBooleanArray(jsize len) { + return functions->NewBooleanArray(this,len); + } + jbyteArray NewByteArray(jsize len) { + return functions->NewByteArray(this,len); + } + jcharArray NewCharArray(jsize len) { + return functions->NewCharArray(this,len); + } + jshortArray NewShortArray(jsize len) { + return functions->NewShortArray(this,len); + } + jintArray NewIntArray(jsize len) { + return functions->NewIntArray(this,len); + } + jlongArray NewLongArray(jsize len) { + return functions->NewLongArray(this,len); + } + jfloatArray NewFloatArray(jsize len) { + return functions->NewFloatArray(this,len); + } + jdoubleArray NewDoubleArray(jsize len) { + return functions->NewDoubleArray(this,len); + } + + jboolean * GetBooleanArrayElements(jbooleanArray array, jboolean *isCopy) { + return functions->GetBooleanArrayElements(this,array,isCopy); + } + jbyte * GetByteArrayElements(jbyteArray array, jboolean *isCopy) { + return functions->GetByteArrayElements(this,array,isCopy); + } + jchar * GetCharArrayElements(jcharArray array, jboolean *isCopy) { + return functions->GetCharArrayElements(this,array,isCopy); + } + jshort * GetShortArrayElements(jshortArray array, jboolean *isCopy) { + return functions->GetShortArrayElements(this,array,isCopy); + } + jint * GetIntArrayElements(jintArray array, jboolean *isCopy) { + return functions->GetIntArrayElements(this,array,isCopy); + } + jlong * GetLongArrayElements(jlongArray array, jboolean *isCopy) { + return functions->GetLongArrayElements(this,array,isCopy); + } + jfloat * GetFloatArrayElements(jfloatArray array, jboolean *isCopy) { + return functions->GetFloatArrayElements(this,array,isCopy); + } + jdouble * GetDoubleArrayElements(jdoubleArray array, jboolean *isCopy) { + return functions->GetDoubleArrayElements(this,array,isCopy); + } + + void ReleaseBooleanArrayElements(jbooleanArray array, + jboolean *elems, + jint mode) { + functions->ReleaseBooleanArrayElements(this,array,elems,mode); + } + void ReleaseByteArrayElements(jbyteArray array, + jbyte *elems, + jint mode) { + functions->ReleaseByteArrayElements(this,array,elems,mode); + } + void ReleaseCharArrayElements(jcharArray array, + jchar *elems, + jint mode) { + functions->ReleaseCharArrayElements(this,array,elems,mode); + } + void ReleaseShortArrayElements(jshortArray array, + jshort *elems, + jint mode) { + functions->ReleaseShortArrayElements(this,array,elems,mode); + } + void ReleaseIntArrayElements(jintArray array, + jint *elems, + jint mode) { + functions->ReleaseIntArrayElements(this,array,elems,mode); + } + void ReleaseLongArrayElements(jlongArray array, + jlong *elems, + jint mode) { + functions->ReleaseLongArrayElements(this,array,elems,mode); + } + void ReleaseFloatArrayElements(jfloatArray array, + jfloat *elems, + jint mode) { + functions->ReleaseFloatArrayElements(this,array,elems,mode); + } + void ReleaseDoubleArrayElements(jdoubleArray array, + jdouble *elems, + jint mode) { + functions->ReleaseDoubleArrayElements(this,array,elems,mode); + } + + void GetBooleanArrayRegion(jbooleanArray array, + jsize start, jsize len, jboolean *buf) { + functions->GetBooleanArrayRegion(this,array,start,len,buf); + } + void GetByteArrayRegion(jbyteArray array, + jsize start, jsize len, jbyte *buf) { + functions->GetByteArrayRegion(this,array,start,len,buf); + } + void GetCharArrayRegion(jcharArray array, + jsize start, jsize len, jchar *buf) { + functions->GetCharArrayRegion(this,array,start,len,buf); + } + void GetShortArrayRegion(jshortArray array, + jsize start, jsize len, jshort *buf) { + functions->GetShortArrayRegion(this,array,start,len,buf); + } + void GetIntArrayRegion(jintArray array, + jsize start, jsize len, jint *buf) { + functions->GetIntArrayRegion(this,array,start,len,buf); + } + void GetLongArrayRegion(jlongArray array, + jsize start, jsize len, jlong *buf) { + functions->GetLongArrayRegion(this,array,start,len,buf); + } + void GetFloatArrayRegion(jfloatArray array, + jsize start, jsize len, jfloat *buf) { + functions->GetFloatArrayRegion(this,array,start,len,buf); + } + void GetDoubleArrayRegion(jdoubleArray array, + jsize start, jsize len, jdouble *buf) { + functions->GetDoubleArrayRegion(this,array,start,len,buf); + } + + void SetBooleanArrayRegion(jbooleanArray array, jsize start, jsize len, + const jboolean *buf) { + functions->SetBooleanArrayRegion(this,array,start,len,buf); + } + void SetByteArrayRegion(jbyteArray array, jsize start, jsize len, + const jbyte *buf) { + functions->SetByteArrayRegion(this,array,start,len,buf); + } + void SetCharArrayRegion(jcharArray array, jsize start, jsize len, + const jchar *buf) { + functions->SetCharArrayRegion(this,array,start,len,buf); + } + void SetShortArrayRegion(jshortArray array, jsize start, jsize len, + const jshort *buf) { + functions->SetShortArrayRegion(this,array,start,len,buf); + } + void SetIntArrayRegion(jintArray array, jsize start, jsize len, + const jint *buf) { + functions->SetIntArrayRegion(this,array,start,len,buf); + } + void SetLongArrayRegion(jlongArray array, jsize start, jsize len, + const jlong *buf) { + functions->SetLongArrayRegion(this,array,start,len,buf); + } + void SetFloatArrayRegion(jfloatArray array, jsize start, jsize len, + const jfloat *buf) { + functions->SetFloatArrayRegion(this,array,start,len,buf); + } + void SetDoubleArrayRegion(jdoubleArray array, jsize start, jsize len, + const jdouble *buf) { + functions->SetDoubleArrayRegion(this,array,start,len,buf); + } + + jint RegisterNatives(jclass clazz, const JNINativeMethod *methods, + jint nMethods) { + return functions->RegisterNatives(this,clazz,methods,nMethods); + } + jint UnregisterNatives(jclass clazz) { + return functions->UnregisterNatives(this,clazz); + } + + jint MonitorEnter(jobject obj) { + return functions->MonitorEnter(this,obj); + } + jint MonitorExit(jobject obj) { + return functions->MonitorExit(this,obj); + } + + jint GetJavaVM(JavaVM **vm) { + return functions->GetJavaVM(this,vm); + } + + void GetStringRegion(jstring str, jsize start, jsize len, jchar *buf) { + functions->GetStringRegion(this,str,start,len,buf); + } + void GetStringUTFRegion(jstring str, jsize start, jsize len, char *buf) { + functions->GetStringUTFRegion(this,str,start,len,buf); + } + + void * GetPrimitiveArrayCritical(jarray array, jboolean *isCopy) { + return functions->GetPrimitiveArrayCritical(this,array,isCopy); + } + void ReleasePrimitiveArrayCritical(jarray array, void *carray, jint mode) { + functions->ReleasePrimitiveArrayCritical(this,array,carray,mode); + } + + const jchar * GetStringCritical(jstring string, jboolean *isCopy) { + return functions->GetStringCritical(this,string,isCopy); + } + void ReleaseStringCritical(jstring string, const jchar *cstring) { + functions->ReleaseStringCritical(this,string,cstring); + } + + jweak NewWeakGlobalRef(jobject obj) { + return functions->NewWeakGlobalRef(this,obj); + } + void DeleteWeakGlobalRef(jweak ref) { + functions->DeleteWeakGlobalRef(this,ref); + } + + jboolean ExceptionCheck() { + return functions->ExceptionCheck(this); + } + + jobject NewDirectByteBuffer(void* address, jlong capacity) { + return functions->NewDirectByteBuffer(this, address, capacity); + } + void* GetDirectBufferAddress(jobject buf) { + return functions->GetDirectBufferAddress(this, buf); + } + jlong GetDirectBufferCapacity(jobject buf) { + return functions->GetDirectBufferCapacity(this, buf); + } + jobjectRefType GetObjectRefType(jobject obj) { + return functions->GetObjectRefType(this, obj); + } + + /* Module Features */ + + jobject GetModule(jclass clazz) { + return functions->GetModule(this, clazz); + } + +#endif /* __cplusplus */ +}; + +typedef struct JavaVMOption { + char *optionString; + void *extraInfo; +} JavaVMOption; + +typedef struct JavaVMInitArgs { + jint version; + + jint nOptions; + JavaVMOption *options; + jboolean ignoreUnrecognized; +} JavaVMInitArgs; + +typedef struct JavaVMAttachArgs { + jint version; + + char *name; + jobject group; +} JavaVMAttachArgs; + +/* These will be VM-specific. */ + +#define JDK1_2 +#define JDK1_4 + +/* End VM-specific. */ + +struct JNIInvokeInterface_ { + void *reserved0; + void *reserved1; + void *reserved2; + + jint (JNICALL *DestroyJavaVM)(JavaVM *vm); + + jint (JNICALL *AttachCurrentThread)(JavaVM *vm, void **penv, void *args); + + jint (JNICALL *DetachCurrentThread)(JavaVM *vm); + + jint (JNICALL *GetEnv)(JavaVM *vm, void **penv, jint version); + + jint (JNICALL *AttachCurrentThreadAsDaemon)(JavaVM *vm, void **penv, void *args); +}; + +struct JavaVM_ { + const struct JNIInvokeInterface_ *functions; +#ifdef __cplusplus + + jint DestroyJavaVM() { + return functions->DestroyJavaVM(this); + } + jint AttachCurrentThread(void **penv, void *args) { + return functions->AttachCurrentThread(this, penv, args); + } + jint DetachCurrentThread() { + return functions->DetachCurrentThread(this); + } + + jint GetEnv(void **penv, jint version) { + return functions->GetEnv(this, penv, version); + } + jint AttachCurrentThreadAsDaemon(void **penv, void *args) { + return functions->AttachCurrentThreadAsDaemon(this, penv, args); + } +#endif +}; + +#ifdef _JNI_IMPLEMENTATION_ +#define _JNI_IMPORT_OR_EXPORT_ JNIEXPORT +#else +#define _JNI_IMPORT_OR_EXPORT_ JNIIMPORT +#endif +_JNI_IMPORT_OR_EXPORT_ jint JNICALL +JNI_GetDefaultJavaVMInitArgs(void *args); + +_JNI_IMPORT_OR_EXPORT_ jint JNICALL +JNI_CreateJavaVM(JavaVM **pvm, void **penv, void *args); + +_JNI_IMPORT_OR_EXPORT_ jint JNICALL +JNI_GetCreatedJavaVMs(JavaVM **, jsize, jsize *); + +/* Defined by native libraries. */ +JNIEXPORT jint JNICALL +JNI_OnLoad(JavaVM *vm, void *reserved); + +JNIEXPORT void JNICALL +JNI_OnUnload(JavaVM *vm, void *reserved); + +#define JNI_VERSION_1_1 0x00010001 +#define JNI_VERSION_1_2 0x00010002 +#define JNI_VERSION_1_4 0x00010004 +#define JNI_VERSION_1_6 0x00010006 +#define JNI_VERSION_1_8 0x00010008 +#define JNI_VERSION_9 0x00090000 +#define JNI_VERSION_10 0x000a0000 + +#ifdef __cplusplus +} /* extern "C" */ +#endif /* __cplusplus */ + +#endif /* !_JAVASOFT_JNI_H_ */ diff --git a/jalview_java/include/jvmti.h b/jalview_java/include/jvmti.h new file mode 100644 index 0000000..327a192 --- /dev/null +++ b/jalview_java/include/jvmti.h @@ -0,0 +1,2625 @@ +/* + * Copyright (c) 2002, 2018, Oracle and/or its affiliates. All rights reserved. + * DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. + * + * This code is free software; you can redistribute it and/or modify it + * under the terms of the GNU General Public License version 2 only, as + * published by the Free Software Foundation. Oracle designates this + * particular file as subject to the "Classpath" exception as provided + * by Oracle in the LICENSE file that accompanied this code. + * + * This code is distributed in the hope that it will be useful, but WITHOUT + * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or + * FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License + * version 2 for more details (a copy is included in the LICENSE file that + * accompanied this code). + * + * You should have received a copy of the GNU General Public License version + * 2 along with this work; if not, write to the Free Software Foundation, + * Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. + * + * Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA + * or visit www.oracle.com if you need additional information or have any + * questions. + */ + + /* AUTOMATICALLY GENERATED FILE - DO NOT EDIT */ + + /* Include file for the Java(tm) Virtual Machine Tool Interface */ + +#ifndef _JAVA_JVMTI_H_ +#define _JAVA_JVMTI_H_ + +#include "jni.h" + +#ifdef __cplusplus +extern "C" { +#endif + +enum { + JVMTI_VERSION_1 = 0x30010000, + JVMTI_VERSION_1_0 = 0x30010000, + JVMTI_VERSION_1_1 = 0x30010100, + JVMTI_VERSION_1_2 = 0x30010200, + JVMTI_VERSION_9 = 0x30090000, + JVMTI_VERSION_11 = 0x300B0000, + + JVMTI_VERSION = 0x30000000 + (11 * 0x10000) + (0 * 0x100) + 0 /* version: 11.0.0 */ +}; + +JNIEXPORT jint JNICALL +Agent_OnLoad(JavaVM *vm, char *options, void *reserved); + +JNIEXPORT jint JNICALL +Agent_OnAttach(JavaVM* vm, char* options, void* reserved); + +JNIEXPORT void JNICALL +Agent_OnUnload(JavaVM *vm); + + /* Forward declaration of the environment */ + +struct _jvmtiEnv; + +struct jvmtiInterface_1_; + +#ifdef __cplusplus +typedef _jvmtiEnv jvmtiEnv; +#else +typedef const struct jvmtiInterface_1_ *jvmtiEnv; +#endif /* __cplusplus */ + +/* Derived Base Types */ + +typedef jobject jthread; +typedef jobject jthreadGroup; +typedef jlong jlocation; +struct _jrawMonitorID; +typedef struct _jrawMonitorID *jrawMonitorID; +typedef struct JNINativeInterface_ jniNativeInterface; + + /* Constants */ + + + /* Thread State Flags */ + +enum { + JVMTI_THREAD_STATE_ALIVE = 0x0001, + JVMTI_THREAD_STATE_TERMINATED = 0x0002, + JVMTI_THREAD_STATE_RUNNABLE = 0x0004, + JVMTI_THREAD_STATE_BLOCKED_ON_MONITOR_ENTER = 0x0400, + JVMTI_THREAD_STATE_WAITING = 0x0080, + JVMTI_THREAD_STATE_WAITING_INDEFINITELY = 0x0010, + JVMTI_THREAD_STATE_WAITING_WITH_TIMEOUT = 0x0020, + JVMTI_THREAD_STATE_SLEEPING = 0x0040, + JVMTI_THREAD_STATE_IN_OBJECT_WAIT = 0x0100, + JVMTI_THREAD_STATE_PARKED = 0x0200, + JVMTI_THREAD_STATE_SUSPENDED = 0x100000, + JVMTI_THREAD_STATE_INTERRUPTED = 0x200000, + JVMTI_THREAD_STATE_IN_NATIVE = 0x400000, + JVMTI_THREAD_STATE_VENDOR_1 = 0x10000000, + JVMTI_THREAD_STATE_VENDOR_2 = 0x20000000, + JVMTI_THREAD_STATE_VENDOR_3 = 0x40000000 +}; + + /* java.lang.Thread.State Conversion Masks */ + +enum { + JVMTI_JAVA_LANG_THREAD_STATE_MASK = JVMTI_THREAD_STATE_TERMINATED | JVMTI_THREAD_STATE_ALIVE | JVMTI_THREAD_STATE_RUNNABLE | JVMTI_THREAD_STATE_BLOCKED_ON_MONITOR_ENTER | JVMTI_THREAD_STATE_WAITING | JVMTI_THREAD_STATE_WAITING_INDEFINITELY | JVMTI_THREAD_STATE_WAITING_WITH_TIMEOUT, + JVMTI_JAVA_LANG_THREAD_STATE_NEW = 0, + JVMTI_JAVA_LANG_THREAD_STATE_TERMINATED = JVMTI_THREAD_STATE_TERMINATED, + JVMTI_JAVA_LANG_THREAD_STATE_RUNNABLE = JVMTI_THREAD_STATE_ALIVE | JVMTI_THREAD_STATE_RUNNABLE, + JVMTI_JAVA_LANG_THREAD_STATE_BLOCKED = JVMTI_THREAD_STATE_ALIVE | JVMTI_THREAD_STATE_BLOCKED_ON_MONITOR_ENTER, + JVMTI_JAVA_LANG_THREAD_STATE_WAITING = JVMTI_THREAD_STATE_ALIVE | JVMTI_THREAD_STATE_WAITING | JVMTI_THREAD_STATE_WAITING_INDEFINITELY, + JVMTI_JAVA_LANG_THREAD_STATE_TIMED_WAITING = JVMTI_THREAD_STATE_ALIVE | JVMTI_THREAD_STATE_WAITING | JVMTI_THREAD_STATE_WAITING_WITH_TIMEOUT +}; + + /* Thread Priority Constants */ + +enum { + JVMTI_THREAD_MIN_PRIORITY = 1, + JVMTI_THREAD_NORM_PRIORITY = 5, + JVMTI_THREAD_MAX_PRIORITY = 10 +}; + + /* Heap Filter Flags */ + +enum { + JVMTI_HEAP_FILTER_TAGGED = 0x4, + JVMTI_HEAP_FILTER_UNTAGGED = 0x8, + JVMTI_HEAP_FILTER_CLASS_TAGGED = 0x10, + JVMTI_HEAP_FILTER_CLASS_UNTAGGED = 0x20 +}; + + /* Heap Visit Control Flags */ + +enum { + JVMTI_VISIT_OBJECTS = 0x100, + JVMTI_VISIT_ABORT = 0x8000 +}; + + /* Heap Reference Enumeration */ + +typedef enum { + JVMTI_HEAP_REFERENCE_CLASS = 1, + JVMTI_HEAP_REFERENCE_FIELD = 2, + JVMTI_HEAP_REFERENCE_ARRAY_ELEMENT = 3, + JVMTI_HEAP_REFERENCE_CLASS_LOADER = 4, + JVMTI_HEAP_REFERENCE_SIGNERS = 5, + JVMTI_HEAP_REFERENCE_PROTECTION_DOMAIN = 6, + JVMTI_HEAP_REFERENCE_INTERFACE = 7, + JVMTI_HEAP_REFERENCE_STATIC_FIELD = 8, + JVMTI_HEAP_REFERENCE_CONSTANT_POOL = 9, + JVMTI_HEAP_REFERENCE_SUPERCLASS = 10, + JVMTI_HEAP_REFERENCE_JNI_GLOBAL = 21, + JVMTI_HEAP_REFERENCE_SYSTEM_CLASS = 22, + JVMTI_HEAP_REFERENCE_MONITOR = 23, + JVMTI_HEAP_REFERENCE_STACK_LOCAL = 24, + JVMTI_HEAP_REFERENCE_JNI_LOCAL = 25, + JVMTI_HEAP_REFERENCE_THREAD = 26, + JVMTI_HEAP_REFERENCE_OTHER = 27 +} jvmtiHeapReferenceKind; + + /* Primitive Type Enumeration */ + +typedef enum { + JVMTI_PRIMITIVE_TYPE_BOOLEAN = 90, + JVMTI_PRIMITIVE_TYPE_BYTE = 66, + JVMTI_PRIMITIVE_TYPE_CHAR = 67, + JVMTI_PRIMITIVE_TYPE_SHORT = 83, + JVMTI_PRIMITIVE_TYPE_INT = 73, + JVMTI_PRIMITIVE_TYPE_LONG = 74, + JVMTI_PRIMITIVE_TYPE_FLOAT = 70, + JVMTI_PRIMITIVE_TYPE_DOUBLE = 68 +} jvmtiPrimitiveType; + + /* Heap Object Filter Enumeration */ + +typedef enum { + JVMTI_HEAP_OBJECT_TAGGED = 1, + JVMTI_HEAP_OBJECT_UNTAGGED = 2, + JVMTI_HEAP_OBJECT_EITHER = 3 +} jvmtiHeapObjectFilter; + + /* Heap Root Kind Enumeration */ + +typedef enum { + JVMTI_HEAP_ROOT_JNI_GLOBAL = 1, + JVMTI_HEAP_ROOT_SYSTEM_CLASS = 2, + JVMTI_HEAP_ROOT_MONITOR = 3, + JVMTI_HEAP_ROOT_STACK_LOCAL = 4, + JVMTI_HEAP_ROOT_JNI_LOCAL = 5, + JVMTI_HEAP_ROOT_THREAD = 6, + JVMTI_HEAP_ROOT_OTHER = 7 +} jvmtiHeapRootKind; + + /* Object Reference Enumeration */ + +typedef enum { + JVMTI_REFERENCE_CLASS = 1, + JVMTI_REFERENCE_FIELD = 2, + JVMTI_REFERENCE_ARRAY_ELEMENT = 3, + JVMTI_REFERENCE_CLASS_LOADER = 4, + JVMTI_REFERENCE_SIGNERS = 5, + JVMTI_REFERENCE_PROTECTION_DOMAIN = 6, + JVMTI_REFERENCE_INTERFACE = 7, + JVMTI_REFERENCE_STATIC_FIELD = 8, + JVMTI_REFERENCE_CONSTANT_POOL = 9 +} jvmtiObjectReferenceKind; + + /* Iteration Control Enumeration */ + +typedef enum { + JVMTI_ITERATION_CONTINUE = 1, + JVMTI_ITERATION_IGNORE = 2, + JVMTI_ITERATION_ABORT = 0 +} jvmtiIterationControl; + + /* Class Status Flags */ + +enum { + JVMTI_CLASS_STATUS_VERIFIED = 1, + JVMTI_CLASS_STATUS_PREPARED = 2, + JVMTI_CLASS_STATUS_INITIALIZED = 4, + JVMTI_CLASS_STATUS_ERROR = 8, + JVMTI_CLASS_STATUS_ARRAY = 16, + JVMTI_CLASS_STATUS_PRIMITIVE = 32 +}; + + /* Event Enable/Disable */ + +typedef enum { + JVMTI_ENABLE = 1, + JVMTI_DISABLE = 0 +} jvmtiEventMode; + + /* Extension Function/Event Parameter Types */ + +typedef enum { + JVMTI_TYPE_JBYTE = 101, + JVMTI_TYPE_JCHAR = 102, + JVMTI_TYPE_JSHORT = 103, + JVMTI_TYPE_JINT = 104, + JVMTI_TYPE_JLONG = 105, + JVMTI_TYPE_JFLOAT = 106, + JVMTI_TYPE_JDOUBLE = 107, + JVMTI_TYPE_JBOOLEAN = 108, + JVMTI_TYPE_JOBJECT = 109, + JVMTI_TYPE_JTHREAD = 110, + JVMTI_TYPE_JCLASS = 111, + JVMTI_TYPE_JVALUE = 112, + JVMTI_TYPE_JFIELDID = 113, + JVMTI_TYPE_JMETHODID = 114, + JVMTI_TYPE_CCHAR = 115, + JVMTI_TYPE_CVOID = 116, + JVMTI_TYPE_JNIENV = 117 +} jvmtiParamTypes; + + /* Extension Function/Event Parameter Kinds */ + +typedef enum { + JVMTI_KIND_IN = 91, + JVMTI_KIND_IN_PTR = 92, + JVMTI_KIND_IN_BUF = 93, + JVMTI_KIND_ALLOC_BUF = 94, + JVMTI_KIND_ALLOC_ALLOC_BUF = 95, + JVMTI_KIND_OUT = 96, + JVMTI_KIND_OUT_BUF = 97 +} jvmtiParamKind; + + /* Timer Kinds */ + +typedef enum { + JVMTI_TIMER_USER_CPU = 30, + JVMTI_TIMER_TOTAL_CPU = 31, + JVMTI_TIMER_ELAPSED = 32 +} jvmtiTimerKind; + + /* Phases of execution */ + +typedef enum { + JVMTI_PHASE_ONLOAD = 1, + JVMTI_PHASE_PRIMORDIAL = 2, + JVMTI_PHASE_START = 6, + JVMTI_PHASE_LIVE = 4, + JVMTI_PHASE_DEAD = 8 +} jvmtiPhase; + + /* Version Interface Types */ + +enum { + JVMTI_VERSION_INTERFACE_JNI = 0x00000000, + JVMTI_VERSION_INTERFACE_JVMTI = 0x30000000 +}; + + /* Version Masks */ + +enum { + JVMTI_VERSION_MASK_INTERFACE_TYPE = 0x70000000, + JVMTI_VERSION_MASK_MAJOR = 0x0FFF0000, + JVMTI_VERSION_MASK_MINOR = 0x0000FF00, + JVMTI_VERSION_MASK_MICRO = 0x000000FF +}; + + /* Version Shifts */ + +enum { + JVMTI_VERSION_SHIFT_MAJOR = 16, + JVMTI_VERSION_SHIFT_MINOR = 8, + JVMTI_VERSION_SHIFT_MICRO = 0 +}; + + /* Verbose Flag Enumeration */ + +typedef enum { + JVMTI_VERBOSE_OTHER = 0, + JVMTI_VERBOSE_GC = 1, + JVMTI_VERBOSE_CLASS = 2, + JVMTI_VERBOSE_JNI = 4 +} jvmtiVerboseFlag; + + /* JLocation Format Enumeration */ + +typedef enum { + JVMTI_JLOCATION_JVMBCI = 1, + JVMTI_JLOCATION_MACHINEPC = 2, + JVMTI_JLOCATION_OTHER = 0 +} jvmtiJlocationFormat; + + /* Resource Exhaustion Flags */ + +enum { + JVMTI_RESOURCE_EXHAUSTED_OOM_ERROR = 0x0001, + JVMTI_RESOURCE_EXHAUSTED_JAVA_HEAP = 0x0002, + JVMTI_RESOURCE_EXHAUSTED_THREADS = 0x0004 +}; + + /* Errors */ + +typedef enum { + JVMTI_ERROR_NONE = 0, + JVMTI_ERROR_INVALID_THREAD = 10, + JVMTI_ERROR_INVALID_THREAD_GROUP = 11, + JVMTI_ERROR_INVALID_PRIORITY = 12, + JVMTI_ERROR_THREAD_NOT_SUSPENDED = 13, + JVMTI_ERROR_THREAD_SUSPENDED = 14, + JVMTI_ERROR_THREAD_NOT_ALIVE = 15, + JVMTI_ERROR_INVALID_OBJECT = 20, + JVMTI_ERROR_INVALID_CLASS = 21, + JVMTI_ERROR_CLASS_NOT_PREPARED = 22, + JVMTI_ERROR_INVALID_METHODID = 23, + JVMTI_ERROR_INVALID_LOCATION = 24, + JVMTI_ERROR_INVALID_FIELDID = 25, + JVMTI_ERROR_INVALID_MODULE = 26, + JVMTI_ERROR_NO_MORE_FRAMES = 31, + JVMTI_ERROR_OPAQUE_FRAME = 32, + JVMTI_ERROR_TYPE_MISMATCH = 34, + JVMTI_ERROR_INVALID_SLOT = 35, + JVMTI_ERROR_DUPLICATE = 40, + JVMTI_ERROR_NOT_FOUND = 41, + JVMTI_ERROR_INVALID_MONITOR = 50, + JVMTI_ERROR_NOT_MONITOR_OWNER = 51, + JVMTI_ERROR_INTERRUPT = 52, + JVMTI_ERROR_INVALID_CLASS_FORMAT = 60, + JVMTI_ERROR_CIRCULAR_CLASS_DEFINITION = 61, + JVMTI_ERROR_FAILS_VERIFICATION = 62, + JVMTI_ERROR_UNSUPPORTED_REDEFINITION_METHOD_ADDED = 63, + JVMTI_ERROR_UNSUPPORTED_REDEFINITION_SCHEMA_CHANGED = 64, + JVMTI_ERROR_INVALID_TYPESTATE = 65, + JVMTI_ERROR_UNSUPPORTED_REDEFINITION_HIERARCHY_CHANGED = 66, + JVMTI_ERROR_UNSUPPORTED_REDEFINITION_METHOD_DELETED = 67, + JVMTI_ERROR_UNSUPPORTED_VERSION = 68, + JVMTI_ERROR_NAMES_DONT_MATCH = 69, + JVMTI_ERROR_UNSUPPORTED_REDEFINITION_CLASS_MODIFIERS_CHANGED = 70, + JVMTI_ERROR_UNSUPPORTED_REDEFINITION_METHOD_MODIFIERS_CHANGED = 71, + JVMTI_ERROR_UNSUPPORTED_REDEFINITION_CLASS_ATTRIBUTE_CHANGED = 72, + JVMTI_ERROR_UNMODIFIABLE_CLASS = 79, + JVMTI_ERROR_UNMODIFIABLE_MODULE = 80, + JVMTI_ERROR_NOT_AVAILABLE = 98, + JVMTI_ERROR_MUST_POSSESS_CAPABILITY = 99, + JVMTI_ERROR_NULL_POINTER = 100, + JVMTI_ERROR_ABSENT_INFORMATION = 101, + JVMTI_ERROR_INVALID_EVENT_TYPE = 102, + JVMTI_ERROR_ILLEGAL_ARGUMENT = 103, + JVMTI_ERROR_NATIVE_METHOD = 104, + JVMTI_ERROR_CLASS_LOADER_UNSUPPORTED = 106, + JVMTI_ERROR_OUT_OF_MEMORY = 110, + JVMTI_ERROR_ACCESS_DENIED = 111, + JVMTI_ERROR_WRONG_PHASE = 112, + JVMTI_ERROR_INTERNAL = 113, + JVMTI_ERROR_UNATTACHED_THREAD = 115, + JVMTI_ERROR_INVALID_ENVIRONMENT = 116, + JVMTI_ERROR_MAX = 116 +} jvmtiError; + + /* Event IDs */ + +typedef enum { + JVMTI_MIN_EVENT_TYPE_VAL = 50, + JVMTI_EVENT_VM_INIT = 50, + JVMTI_EVENT_VM_DEATH = 51, + JVMTI_EVENT_THREAD_START = 52, + JVMTI_EVENT_THREAD_END = 53, + JVMTI_EVENT_CLASS_FILE_LOAD_HOOK = 54, + JVMTI_EVENT_CLASS_LOAD = 55, + JVMTI_EVENT_CLASS_PREPARE = 56, + JVMTI_EVENT_VM_START = 57, + JVMTI_EVENT_EXCEPTION = 58, + JVMTI_EVENT_EXCEPTION_CATCH = 59, + JVMTI_EVENT_SINGLE_STEP = 60, + JVMTI_EVENT_FRAME_POP = 61, + JVMTI_EVENT_BREAKPOINT = 62, + JVMTI_EVENT_FIELD_ACCESS = 63, + JVMTI_EVENT_FIELD_MODIFICATION = 64, + JVMTI_EVENT_METHOD_ENTRY = 65, + JVMTI_EVENT_METHOD_EXIT = 66, + JVMTI_EVENT_NATIVE_METHOD_BIND = 67, + JVMTI_EVENT_COMPILED_METHOD_LOAD = 68, + JVMTI_EVENT_COMPILED_METHOD_UNLOAD = 69, + JVMTI_EVENT_DYNAMIC_CODE_GENERATED = 70, + JVMTI_EVENT_DATA_DUMP_REQUEST = 71, + JVMTI_EVENT_MONITOR_WAIT = 73, + JVMTI_EVENT_MONITOR_WAITED = 74, + JVMTI_EVENT_MONITOR_CONTENDED_ENTER = 75, + JVMTI_EVENT_MONITOR_CONTENDED_ENTERED = 76, + JVMTI_EVENT_RESOURCE_EXHAUSTED = 80, + JVMTI_EVENT_GARBAGE_COLLECTION_START = 81, + JVMTI_EVENT_GARBAGE_COLLECTION_FINISH = 82, + JVMTI_EVENT_OBJECT_FREE = 83, + JVMTI_EVENT_VM_OBJECT_ALLOC = 84, + JVMTI_EVENT_SAMPLED_OBJECT_ALLOC = 86, + JVMTI_MAX_EVENT_TYPE_VAL = 86 +} jvmtiEvent; + + + /* Pre-Declarations */ +struct _jvmtiThreadInfo; +typedef struct _jvmtiThreadInfo jvmtiThreadInfo; +struct _jvmtiMonitorStackDepthInfo; +typedef struct _jvmtiMonitorStackDepthInfo jvmtiMonitorStackDepthInfo; +struct _jvmtiThreadGroupInfo; +typedef struct _jvmtiThreadGroupInfo jvmtiThreadGroupInfo; +struct _jvmtiFrameInfo; +typedef struct _jvmtiFrameInfo jvmtiFrameInfo; +struct _jvmtiStackInfo; +typedef struct _jvmtiStackInfo jvmtiStackInfo; +struct _jvmtiHeapReferenceInfoField; +typedef struct _jvmtiHeapReferenceInfoField jvmtiHeapReferenceInfoField; +struct _jvmtiHeapReferenceInfoArray; +typedef struct _jvmtiHeapReferenceInfoArray jvmtiHeapReferenceInfoArray; +struct _jvmtiHeapReferenceInfoConstantPool; +typedef struct _jvmtiHeapReferenceInfoConstantPool jvmtiHeapReferenceInfoConstantPool; +struct _jvmtiHeapReferenceInfoStackLocal; +typedef struct _jvmtiHeapReferenceInfoStackLocal jvmtiHeapReferenceInfoStackLocal; +struct _jvmtiHeapReferenceInfoJniLocal; +typedef struct _jvmtiHeapReferenceInfoJniLocal jvmtiHeapReferenceInfoJniLocal; +struct _jvmtiHeapReferenceInfoReserved; +typedef struct _jvmtiHeapReferenceInfoReserved jvmtiHeapReferenceInfoReserved; +union _jvmtiHeapReferenceInfo; +typedef union _jvmtiHeapReferenceInfo jvmtiHeapReferenceInfo; +struct _jvmtiHeapCallbacks; +typedef struct _jvmtiHeapCallbacks jvmtiHeapCallbacks; +struct _jvmtiClassDefinition; +typedef struct _jvmtiClassDefinition jvmtiClassDefinition; +struct _jvmtiMonitorUsage; +typedef struct _jvmtiMonitorUsage jvmtiMonitorUsage; +struct _jvmtiLineNumberEntry; +typedef struct _jvmtiLineNumberEntry jvmtiLineNumberEntry; +struct _jvmtiLocalVariableEntry; +typedef struct _jvmtiLocalVariableEntry jvmtiLocalVariableEntry; +struct _jvmtiParamInfo; +typedef struct _jvmtiParamInfo jvmtiParamInfo; +struct _jvmtiExtensionFunctionInfo; +typedef struct _jvmtiExtensionFunctionInfo jvmtiExtensionFunctionInfo; +struct _jvmtiExtensionEventInfo; +typedef struct _jvmtiExtensionEventInfo jvmtiExtensionEventInfo; +struct _jvmtiTimerInfo; +typedef struct _jvmtiTimerInfo jvmtiTimerInfo; +struct _jvmtiAddrLocationMap; +typedef struct _jvmtiAddrLocationMap jvmtiAddrLocationMap; + + /* Function Types */ + +typedef void (JNICALL *jvmtiStartFunction) + (jvmtiEnv* jvmti_env, JNIEnv* jni_env, void* arg); + +typedef jint (JNICALL *jvmtiHeapIterationCallback) + (jlong class_tag, jlong size, jlong* tag_ptr, jint length, void* user_data); + +typedef jint (JNICALL *jvmtiHeapReferenceCallback) + (jvmtiHeapReferenceKind reference_kind, const jvmtiHeapReferenceInfo* reference_info, jlong class_tag, jlong referrer_class_tag, jlong size, jlong* tag_ptr, jlong* referrer_tag_ptr, jint length, void* user_data); + +typedef jint (JNICALL *jvmtiPrimitiveFieldCallback) + (jvmtiHeapReferenceKind kind, const jvmtiHeapReferenceInfo* info, jlong object_class_tag, jlong* object_tag_ptr, jvalue value, jvmtiPrimitiveType value_type, void* user_data); + +typedef jint (JNICALL *jvmtiArrayPrimitiveValueCallback) + (jlong class_tag, jlong size, jlong* tag_ptr, jint element_count, jvmtiPrimitiveType element_type, const void* elements, void* user_data); + +typedef jint (JNICALL *jvmtiStringPrimitiveValueCallback) + (jlong class_tag, jlong size, jlong* tag_ptr, const jchar* value, jint value_length, void* user_data); + +typedef jint (JNICALL *jvmtiReservedCallback) + (); + +typedef jvmtiIterationControl (JNICALL *jvmtiHeapObjectCallback) + (jlong class_tag, jlong size, jlong* tag_ptr, void* user_data); + +typedef jvmtiIterationControl (JNICALL *jvmtiHeapRootCallback) + (jvmtiHeapRootKind root_kind, jlong class_tag, jlong size, jlong* tag_ptr, void* user_data); + +typedef jvmtiIterationControl (JNICALL *jvmtiStackReferenceCallback) + (jvmtiHeapRootKind root_kind, jlong class_tag, jlong size, jlong* tag_ptr, jlong thread_tag, jint depth, jmethodID method, jint slot, void* user_data); + +typedef jvmtiIterationControl (JNICALL *jvmtiObjectReferenceCallback) + (jvmtiObjectReferenceKind reference_kind, jlong class_tag, jlong size, jlong* tag_ptr, jlong referrer_tag, jint referrer_index, void* user_data); + +typedef jvmtiError (JNICALL *jvmtiExtensionFunction) + (jvmtiEnv* jvmti_env, ...); + +typedef void (JNICALL *jvmtiExtensionEvent) + (jvmtiEnv* jvmti_env, ...); + + + /* Structure Types */ +struct _jvmtiThreadInfo { + char* name; + jint priority; + jboolean is_daemon; + jthreadGroup thread_group; + jobject context_class_loader; +}; +struct _jvmtiMonitorStackDepthInfo { + jobject monitor; + jint stack_depth; +}; +struct _jvmtiThreadGroupInfo { + jthreadGroup parent; + char* name; + jint max_priority; + jboolean is_daemon; +}; +struct _jvmtiFrameInfo { + jmethodID method; + jlocation location; +}; +struct _jvmtiStackInfo { + jthread thread; + jint state; + jvmtiFrameInfo* frame_buffer; + jint frame_count; +}; +struct _jvmtiHeapReferenceInfoField { + jint index; +}; +struct _jvmtiHeapReferenceInfoArray { + jint index; +}; +struct _jvmtiHeapReferenceInfoConstantPool { + jint index; +}; +struct _jvmtiHeapReferenceInfoStackLocal { + jlong thread_tag; + jlong thread_id; + jint depth; + jmethodID method; + jlocation location; + jint slot; +}; +struct _jvmtiHeapReferenceInfoJniLocal { + jlong thread_tag; + jlong thread_id; + jint depth; + jmethodID method; +}; +struct _jvmtiHeapReferenceInfoReserved { + jlong reserved1; + jlong reserved2; + jlong reserved3; + jlong reserved4; + jlong reserved5; + jlong reserved6; + jlong reserved7; + jlong reserved8; +}; +union _jvmtiHeapReferenceInfo { + jvmtiHeapReferenceInfoField field; + jvmtiHeapReferenceInfoArray array; + jvmtiHeapReferenceInfoConstantPool constant_pool; + jvmtiHeapReferenceInfoStackLocal stack_local; + jvmtiHeapReferenceInfoJniLocal jni_local; + jvmtiHeapReferenceInfoReserved other; +}; +struct _jvmtiHeapCallbacks { + jvmtiHeapIterationCallback heap_iteration_callback; + jvmtiHeapReferenceCallback heap_reference_callback; + jvmtiPrimitiveFieldCallback primitive_field_callback; + jvmtiArrayPrimitiveValueCallback array_primitive_value_callback; + jvmtiStringPrimitiveValueCallback string_primitive_value_callback; + jvmtiReservedCallback reserved5; + jvmtiReservedCallback reserved6; + jvmtiReservedCallback reserved7; + jvmtiReservedCallback reserved8; + jvmtiReservedCallback reserved9; + jvmtiReservedCallback reserved10; + jvmtiReservedCallback reserved11; + jvmtiReservedCallback reserved12; + jvmtiReservedCallback reserved13; + jvmtiReservedCallback reserved14; + jvmtiReservedCallback reserved15; +}; +struct _jvmtiClassDefinition { + jclass klass; + jint class_byte_count; + const unsigned char* class_bytes; +}; +struct _jvmtiMonitorUsage { + jthread owner; + jint entry_count; + jint waiter_count; + jthread* waiters; + jint notify_waiter_count; + jthread* notify_waiters; +}; +struct _jvmtiLineNumberEntry { + jlocation start_location; + jint line_number; +}; +struct _jvmtiLocalVariableEntry { + jlocation start_location; + jint length; + char* name; + char* signature; + char* generic_signature; + jint slot; +}; +struct _jvmtiParamInfo { + char* name; + jvmtiParamKind kind; + jvmtiParamTypes base_type; + jboolean null_ok; +}; +struct _jvmtiExtensionFunctionInfo { + jvmtiExtensionFunction func; + char* id; + char* short_description; + jint param_count; + jvmtiParamInfo* params; + jint error_count; + jvmtiError* errors; +}; +struct _jvmtiExtensionEventInfo { + jint extension_event_index; + char* id; + char* short_description; + jint param_count; + jvmtiParamInfo* params; +}; +struct _jvmtiTimerInfo { + jlong max_value; + jboolean may_skip_forward; + jboolean may_skip_backward; + jvmtiTimerKind kind; + jlong reserved1; + jlong reserved2; +}; +struct _jvmtiAddrLocationMap { + const void* start_address; + jlocation location; +}; + +typedef struct { + unsigned int can_tag_objects : 1; + unsigned int can_generate_field_modification_events : 1; + unsigned int can_generate_field_access_events : 1; + unsigned int can_get_bytecodes : 1; + unsigned int can_get_synthetic_attribute : 1; + unsigned int can_get_owned_monitor_info : 1; + unsigned int can_get_current_contended_monitor : 1; + unsigned int can_get_monitor_info : 1; + unsigned int can_pop_frame : 1; + unsigned int can_redefine_classes : 1; + unsigned int can_signal_thread : 1; + unsigned int can_get_source_file_name : 1; + unsigned int can_get_line_numbers : 1; + unsigned int can_get_source_debug_extension : 1; + unsigned int can_access_local_variables : 1; + unsigned int can_maintain_original_method_order : 1; + unsigned int can_generate_single_step_events : 1; + unsigned int can_generate_exception_events : 1; + unsigned int can_generate_frame_pop_events : 1; + unsigned int can_generate_breakpoint_events : 1; + unsigned int can_suspend : 1; + unsigned int can_redefine_any_class : 1; + unsigned int can_get_current_thread_cpu_time : 1; + unsigned int can_get_thread_cpu_time : 1; + unsigned int can_generate_method_entry_events : 1; + unsigned int can_generate_method_exit_events : 1; + unsigned int can_generate_all_class_hook_events : 1; + unsigned int can_generate_compiled_method_load_events : 1; + unsigned int can_generate_monitor_events : 1; + unsigned int can_generate_vm_object_alloc_events : 1; + unsigned int can_generate_native_method_bind_events : 1; + unsigned int can_generate_garbage_collection_events : 1; + unsigned int can_generate_object_free_events : 1; + unsigned int can_force_early_return : 1; + unsigned int can_get_owned_monitor_stack_depth_info : 1; + unsigned int can_get_constant_pool : 1; + unsigned int can_set_native_method_prefix : 1; + unsigned int can_retransform_classes : 1; + unsigned int can_retransform_any_class : 1; + unsigned int can_generate_resource_exhaustion_heap_events : 1; + unsigned int can_generate_resource_exhaustion_threads_events : 1; + unsigned int can_generate_early_vmstart : 1; + unsigned int can_generate_early_class_hook_events : 1; + unsigned int can_generate_sampled_object_alloc_events : 1; + unsigned int : 4; + unsigned int : 16; + unsigned int : 16; + unsigned int : 16; + unsigned int : 16; + unsigned int : 16; +} jvmtiCapabilities; + + + /* Event Definitions */ + +typedef void (JNICALL *jvmtiEventReserved)(void); + + +typedef void (JNICALL *jvmtiEventBreakpoint) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method, + jlocation location); + +typedef void (JNICALL *jvmtiEventClassFileLoadHook) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jclass class_being_redefined, + jobject loader, + const char* name, + jobject protection_domain, + jint class_data_len, + const unsigned char* class_data, + jint* new_class_data_len, + unsigned char** new_class_data); + +typedef void (JNICALL *jvmtiEventClassLoad) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jclass klass); + +typedef void (JNICALL *jvmtiEventClassPrepare) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jclass klass); + +typedef void (JNICALL *jvmtiEventCompiledMethodLoad) + (jvmtiEnv *jvmti_env, + jmethodID method, + jint code_size, + const void* code_addr, + jint map_length, + const jvmtiAddrLocationMap* map, + const void* compile_info); + +typedef void (JNICALL *jvmtiEventCompiledMethodUnload) + (jvmtiEnv *jvmti_env, + jmethodID method, + const void* code_addr); + +typedef void (JNICALL *jvmtiEventDataDumpRequest) + (jvmtiEnv *jvmti_env); + +typedef void (JNICALL *jvmtiEventDynamicCodeGenerated) + (jvmtiEnv *jvmti_env, + const char* name, + const void* address, + jint length); + +typedef void (JNICALL *jvmtiEventException) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method, + jlocation location, + jobject exception, + jmethodID catch_method, + jlocation catch_location); + +typedef void (JNICALL *jvmtiEventExceptionCatch) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method, + jlocation location, + jobject exception); + +typedef void (JNICALL *jvmtiEventFieldAccess) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method, + jlocation location, + jclass field_klass, + jobject object, + jfieldID field); + +typedef void (JNICALL *jvmtiEventFieldModification) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method, + jlocation location, + jclass field_klass, + jobject object, + jfieldID field, + char signature_type, + jvalue new_value); + +typedef void (JNICALL *jvmtiEventFramePop) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method, + jboolean was_popped_by_exception); + +typedef void (JNICALL *jvmtiEventGarbageCollectionFinish) + (jvmtiEnv *jvmti_env); + +typedef void (JNICALL *jvmtiEventGarbageCollectionStart) + (jvmtiEnv *jvmti_env); + +typedef void (JNICALL *jvmtiEventMethodEntry) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method); + +typedef void (JNICALL *jvmtiEventMethodExit) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method, + jboolean was_popped_by_exception, + jvalue return_value); + +typedef void (JNICALL *jvmtiEventMonitorContendedEnter) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jobject object); + +typedef void (JNICALL *jvmtiEventMonitorContendedEntered) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jobject object); + +typedef void (JNICALL *jvmtiEventMonitorWait) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jobject object, + jlong timeout); + +typedef void (JNICALL *jvmtiEventMonitorWaited) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jobject object, + jboolean timed_out); + +typedef void (JNICALL *jvmtiEventNativeMethodBind) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method, + void* address, + void** new_address_ptr); + +typedef void (JNICALL *jvmtiEventObjectFree) + (jvmtiEnv *jvmti_env, + jlong tag); + +typedef void (JNICALL *jvmtiEventResourceExhausted) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jint flags, + const void* reserved, + const char* description); + +typedef void (JNICALL *jvmtiEventSampledObjectAlloc) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jobject object, + jclass object_klass, + jlong size); + +typedef void (JNICALL *jvmtiEventSingleStep) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jmethodID method, + jlocation location); + +typedef void (JNICALL *jvmtiEventThreadEnd) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread); + +typedef void (JNICALL *jvmtiEventThreadStart) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread); + +typedef void (JNICALL *jvmtiEventVMDeath) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env); + +typedef void (JNICALL *jvmtiEventVMInit) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread); + +typedef void (JNICALL *jvmtiEventVMObjectAlloc) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env, + jthread thread, + jobject object, + jclass object_klass, + jlong size); + +typedef void (JNICALL *jvmtiEventVMStart) + (jvmtiEnv *jvmti_env, + JNIEnv* jni_env); + + /* Event Callback Structure */ + +typedef struct { + /* 50 : VM Initialization Event */ + jvmtiEventVMInit VMInit; + /* 51 : VM Death Event */ + jvmtiEventVMDeath VMDeath; + /* 52 : Thread Start */ + jvmtiEventThreadStart ThreadStart; + /* 53 : Thread End */ + jvmtiEventThreadEnd ThreadEnd; + /* 54 : Class File Load Hook */ + jvmtiEventClassFileLoadHook ClassFileLoadHook; + /* 55 : Class Load */ + jvmtiEventClassLoad ClassLoad; + /* 56 : Class Prepare */ + jvmtiEventClassPrepare ClassPrepare; + /* 57 : VM Start Event */ + jvmtiEventVMStart VMStart; + /* 58 : Exception */ + jvmtiEventException Exception; + /* 59 : Exception Catch */ + jvmtiEventExceptionCatch ExceptionCatch; + /* 60 : Single Step */ + jvmtiEventSingleStep SingleStep; + /* 61 : Frame Pop */ + jvmtiEventFramePop FramePop; + /* 62 : Breakpoint */ + jvmtiEventBreakpoint Breakpoint; + /* 63 : Field Access */ + jvmtiEventFieldAccess FieldAccess; + /* 64 : Field Modification */ + jvmtiEventFieldModification FieldModification; + /* 65 : Method Entry */ + jvmtiEventMethodEntry MethodEntry; + /* 66 : Method Exit */ + jvmtiEventMethodExit MethodExit; + /* 67 : Native Method Bind */ + jvmtiEventNativeMethodBind NativeMethodBind; + /* 68 : Compiled Method Load */ + jvmtiEventCompiledMethodLoad CompiledMethodLoad; + /* 69 : Compiled Method Unload */ + jvmtiEventCompiledMethodUnload CompiledMethodUnload; + /* 70 : Dynamic Code Generated */ + jvmtiEventDynamicCodeGenerated DynamicCodeGenerated; + /* 71 : Data Dump Request */ + jvmtiEventDataDumpRequest DataDumpRequest; + /* 72 */ + jvmtiEventReserved reserved72; + /* 73 : Monitor Wait */ + jvmtiEventMonitorWait MonitorWait; + /* 74 : Monitor Waited */ + jvmtiEventMonitorWaited MonitorWaited; + /* 75 : Monitor Contended Enter */ + jvmtiEventMonitorContendedEnter MonitorContendedEnter; + /* 76 : Monitor Contended Entered */ + jvmtiEventMonitorContendedEntered MonitorContendedEntered; + /* 77 */ + jvmtiEventReserved reserved77; + /* 78 */ + jvmtiEventReserved reserved78; + /* 79 */ + jvmtiEventReserved reserved79; + /* 80 : Resource Exhausted */ + jvmtiEventResourceExhausted ResourceExhausted; + /* 81 : Garbage Collection Start */ + jvmtiEventGarbageCollectionStart GarbageCollectionStart; + /* 82 : Garbage Collection Finish */ + jvmtiEventGarbageCollectionFinish GarbageCollectionFinish; + /* 83 : Object Free */ + jvmtiEventObjectFree ObjectFree; + /* 84 : VM Object Allocation */ + jvmtiEventVMObjectAlloc VMObjectAlloc; + /* 85 */ + jvmtiEventReserved reserved85; + /* 86 : Sampled Object Allocation */ + jvmtiEventSampledObjectAlloc SampledObjectAlloc; +} jvmtiEventCallbacks; + + + /* Function Interface */ + +typedef struct jvmtiInterface_1_ { + + /* 1 : RESERVED */ + void *reserved1; + + /* 2 : Set Event Notification Mode */ + jvmtiError (JNICALL *SetEventNotificationMode) (jvmtiEnv* env, + jvmtiEventMode mode, + jvmtiEvent event_type, + jthread event_thread, + ...); + + /* 3 : Get All Modules */ + jvmtiError (JNICALL *GetAllModules) (jvmtiEnv* env, + jint* module_count_ptr, + jobject** modules_ptr); + + /* 4 : Get All Threads */ + jvmtiError (JNICALL *GetAllThreads) (jvmtiEnv* env, + jint* threads_count_ptr, + jthread** threads_ptr); + + /* 5 : Suspend Thread */ + jvmtiError (JNICALL *SuspendThread) (jvmtiEnv* env, + jthread thread); + + /* 6 : Resume Thread */ + jvmtiError (JNICALL *ResumeThread) (jvmtiEnv* env, + jthread thread); + + /* 7 : Stop Thread */ + jvmtiError (JNICALL *StopThread) (jvmtiEnv* env, + jthread thread, + jobject exception); + + /* 8 : Interrupt Thread */ + jvmtiError (JNICALL *InterruptThread) (jvmtiEnv* env, + jthread thread); + + /* 9 : Get Thread Info */ + jvmtiError (JNICALL *GetThreadInfo) (jvmtiEnv* env, + jthread thread, + jvmtiThreadInfo* info_ptr); + + /* 10 : Get Owned Monitor Info */ + jvmtiError (JNICALL *GetOwnedMonitorInfo) (jvmtiEnv* env, + jthread thread, + jint* owned_monitor_count_ptr, + jobject** owned_monitors_ptr); + + /* 11 : Get Current Contended Monitor */ + jvmtiError (JNICALL *GetCurrentContendedMonitor) (jvmtiEnv* env, + jthread thread, + jobject* monitor_ptr); + + /* 12 : Run Agent Thread */ + jvmtiError (JNICALL *RunAgentThread) (jvmtiEnv* env, + jthread thread, + jvmtiStartFunction proc, + const void* arg, + jint priority); + + /* 13 : Get Top Thread Groups */ + jvmtiError (JNICALL *GetTopThreadGroups) (jvmtiEnv* env, + jint* group_count_ptr, + jthreadGroup** groups_ptr); + + /* 14 : Get Thread Group Info */ + jvmtiError (JNICALL *GetThreadGroupInfo) (jvmtiEnv* env, + jthreadGroup group, + jvmtiThreadGroupInfo* info_ptr); + + /* 15 : Get Thread Group Children */ + jvmtiError (JNICALL *GetThreadGroupChildren) (jvmtiEnv* env, + jthreadGroup group, + jint* thread_count_ptr, + jthread** threads_ptr, + jint* group_count_ptr, + jthreadGroup** groups_ptr); + + /* 16 : Get Frame Count */ + jvmtiError (JNICALL *GetFrameCount) (jvmtiEnv* env, + jthread thread, + jint* count_ptr); + + /* 17 : Get Thread State */ + jvmtiError (JNICALL *GetThreadState) (jvmtiEnv* env, + jthread thread, + jint* thread_state_ptr); + + /* 18 : Get Current Thread */ + jvmtiError (JNICALL *GetCurrentThread) (jvmtiEnv* env, + jthread* thread_ptr); + + /* 19 : Get Frame Location */ + jvmtiError (JNICALL *GetFrameLocation) (jvmtiEnv* env, + jthread thread, + jint depth, + jmethodID* method_ptr, + jlocation* location_ptr); + + /* 20 : Notify Frame Pop */ + jvmtiError (JNICALL *NotifyFramePop) (jvmtiEnv* env, + jthread thread, + jint depth); + + /* 21 : Get Local Variable - Object */ + jvmtiError (JNICALL *GetLocalObject) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jobject* value_ptr); + + /* 22 : Get Local Variable - Int */ + jvmtiError (JNICALL *GetLocalInt) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jint* value_ptr); + + /* 23 : Get Local Variable - Long */ + jvmtiError (JNICALL *GetLocalLong) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jlong* value_ptr); + + /* 24 : Get Local Variable - Float */ + jvmtiError (JNICALL *GetLocalFloat) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jfloat* value_ptr); + + /* 25 : Get Local Variable - Double */ + jvmtiError (JNICALL *GetLocalDouble) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jdouble* value_ptr); + + /* 26 : Set Local Variable - Object */ + jvmtiError (JNICALL *SetLocalObject) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jobject value); + + /* 27 : Set Local Variable - Int */ + jvmtiError (JNICALL *SetLocalInt) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jint value); + + /* 28 : Set Local Variable - Long */ + jvmtiError (JNICALL *SetLocalLong) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jlong value); + + /* 29 : Set Local Variable - Float */ + jvmtiError (JNICALL *SetLocalFloat) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jfloat value); + + /* 30 : Set Local Variable - Double */ + jvmtiError (JNICALL *SetLocalDouble) (jvmtiEnv* env, + jthread thread, + jint depth, + jint slot, + jdouble value); + + /* 31 : Create Raw Monitor */ + jvmtiError (JNICALL *CreateRawMonitor) (jvmtiEnv* env, + const char* name, + jrawMonitorID* monitor_ptr); + + /* 32 : Destroy Raw Monitor */ + jvmtiError (JNICALL *DestroyRawMonitor) (jvmtiEnv* env, + jrawMonitorID monitor); + + /* 33 : Raw Monitor Enter */ + jvmtiError (JNICALL *RawMonitorEnter) (jvmtiEnv* env, + jrawMonitorID monitor); + + /* 34 : Raw Monitor Exit */ + jvmtiError (JNICALL *RawMonitorExit) (jvmtiEnv* env, + jrawMonitorID monitor); + + /* 35 : Raw Monitor Wait */ + jvmtiError (JNICALL *RawMonitorWait) (jvmtiEnv* env, + jrawMonitorID monitor, + jlong millis); + + /* 36 : Raw Monitor Notify */ + jvmtiError (JNICALL *RawMonitorNotify) (jvmtiEnv* env, + jrawMonitorID monitor); + + /* 37 : Raw Monitor Notify All */ + jvmtiError (JNICALL *RawMonitorNotifyAll) (jvmtiEnv* env, + jrawMonitorID monitor); + + /* 38 : Set Breakpoint */ + jvmtiError (JNICALL *SetBreakpoint) (jvmtiEnv* env, + jmethodID method, + jlocation location); + + /* 39 : Clear Breakpoint */ + jvmtiError (JNICALL *ClearBreakpoint) (jvmtiEnv* env, + jmethodID method, + jlocation location); + + /* 40 : Get Named Module */ + jvmtiError (JNICALL *GetNamedModule) (jvmtiEnv* env, + jobject class_loader, + const char* package_name, + jobject* module_ptr); + + /* 41 : Set Field Access Watch */ + jvmtiError (JNICALL *SetFieldAccessWatch) (jvmtiEnv* env, + jclass klass, + jfieldID field); + + /* 42 : Clear Field Access Watch */ + jvmtiError (JNICALL *ClearFieldAccessWatch) (jvmtiEnv* env, + jclass klass, + jfieldID field); + + /* 43 : Set Field Modification Watch */ + jvmtiError (JNICALL *SetFieldModificationWatch) (jvmtiEnv* env, + jclass klass, + jfieldID field); + + /* 44 : Clear Field Modification Watch */ + jvmtiError (JNICALL *ClearFieldModificationWatch) (jvmtiEnv* env, + jclass klass, + jfieldID field); + + /* 45 : Is Modifiable Class */ + jvmtiError (JNICALL *IsModifiableClass) (jvmtiEnv* env, + jclass klass, + jboolean* is_modifiable_class_ptr); + + /* 46 : Allocate */ + jvmtiError (JNICALL *Allocate) (jvmtiEnv* env, + jlong size, + unsigned char** mem_ptr); + + /* 47 : Deallocate */ + jvmtiError (JNICALL *Deallocate) (jvmtiEnv* env, + unsigned char* mem); + + /* 48 : Get Class Signature */ + jvmtiError (JNICALL *GetClassSignature) (jvmtiEnv* env, + jclass klass, + char** signature_ptr, + char** generic_ptr); + + /* 49 : Get Class Status */ + jvmtiError (JNICALL *GetClassStatus) (jvmtiEnv* env, + jclass klass, + jint* status_ptr); + + /* 50 : Get Source File Name */ + jvmtiError (JNICALL *GetSourceFileName) (jvmtiEnv* env, + jclass klass, + char** source_name_ptr); + + /* 51 : Get Class Modifiers */ + jvmtiError (JNICALL *GetClassModifiers) (jvmtiEnv* env, + jclass klass, + jint* modifiers_ptr); + + /* 52 : Get Class Methods */ + jvmtiError (JNICALL *GetClassMethods) (jvmtiEnv* env, + jclass klass, + jint* method_count_ptr, + jmethodID** methods_ptr); + + /* 53 : Get Class Fields */ + jvmtiError (JNICALL *GetClassFields) (jvmtiEnv* env, + jclass klass, + jint* field_count_ptr, + jfieldID** fields_ptr); + + /* 54 : Get Implemented Interfaces */ + jvmtiError (JNICALL *GetImplementedInterfaces) (jvmtiEnv* env, + jclass klass, + jint* interface_count_ptr, + jclass** interfaces_ptr); + + /* 55 : Is Interface */ + jvmtiError (JNICALL *IsInterface) (jvmtiEnv* env, + jclass klass, + jboolean* is_interface_ptr); + + /* 56 : Is Array Class */ + jvmtiError (JNICALL *IsArrayClass) (jvmtiEnv* env, + jclass klass, + jboolean* is_array_class_ptr); + + /* 57 : Get Class Loader */ + jvmtiError (JNICALL *GetClassLoader) (jvmtiEnv* env, + jclass klass, + jobject* classloader_ptr); + + /* 58 : Get Object Hash Code */ + jvmtiError (JNICALL *GetObjectHashCode) (jvmtiEnv* env, + jobject object, + jint* hash_code_ptr); + + /* 59 : Get Object Monitor Usage */ + jvmtiError (JNICALL *GetObjectMonitorUsage) (jvmtiEnv* env, + jobject object, + jvmtiMonitorUsage* info_ptr); + + /* 60 : Get Field Name (and Signature) */ + jvmtiError (JNICALL *GetFieldName) (jvmtiEnv* env, + jclass klass, + jfieldID field, + char** name_ptr, + char** signature_ptr, + char** generic_ptr); + + /* 61 : Get Field Declaring Class */ + jvmtiError (JNICALL *GetFieldDeclaringClass) (jvmtiEnv* env, + jclass klass, + jfieldID field, + jclass* declaring_class_ptr); + + /* 62 : Get Field Modifiers */ + jvmtiError (JNICALL *GetFieldModifiers) (jvmtiEnv* env, + jclass klass, + jfieldID field, + jint* modifiers_ptr); + + /* 63 : Is Field Synthetic */ + jvmtiError (JNICALL *IsFieldSynthetic) (jvmtiEnv* env, + jclass klass, + jfieldID field, + jboolean* is_synthetic_ptr); + + /* 64 : Get Method Name (and Signature) */ + jvmtiError (JNICALL *GetMethodName) (jvmtiEnv* env, + jmethodID method, + char** name_ptr, + char** signature_ptr, + char** generic_ptr); + + /* 65 : Get Method Declaring Class */ + jvmtiError (JNICALL *GetMethodDeclaringClass) (jvmtiEnv* env, + jmethodID method, + jclass* declaring_class_ptr); + + /* 66 : Get Method Modifiers */ + jvmtiError (JNICALL *GetMethodModifiers) (jvmtiEnv* env, + jmethodID method, + jint* modifiers_ptr); + + /* 67 : RESERVED */ + void *reserved67; + + /* 68 : Get Max Locals */ + jvmtiError (JNICALL *GetMaxLocals) (jvmtiEnv* env, + jmethodID method, + jint* max_ptr); + + /* 69 : Get Arguments Size */ + jvmtiError (JNICALL *GetArgumentsSize) (jvmtiEnv* env, + jmethodID method, + jint* size_ptr); + + /* 70 : Get Line Number Table */ + jvmtiError (JNICALL *GetLineNumberTable) (jvmtiEnv* env, + jmethodID method, + jint* entry_count_ptr, + jvmtiLineNumberEntry** table_ptr); + + /* 71 : Get Method Location */ + jvmtiError (JNICALL *GetMethodLocation) (jvmtiEnv* env, + jmethodID method, + jlocation* start_location_ptr, + jlocation* end_location_ptr); + + /* 72 : Get Local Variable Table */ + jvmtiError (JNICALL *GetLocalVariableTable) (jvmtiEnv* env, + jmethodID method, + jint* entry_count_ptr, + jvmtiLocalVariableEntry** table_ptr); + + /* 73 : Set Native Method Prefix */ + jvmtiError (JNICALL *SetNativeMethodPrefix) (jvmtiEnv* env, + const char* prefix); + + /* 74 : Set Native Method Prefixes */ + jvmtiError (JNICALL *SetNativeMethodPrefixes) (jvmtiEnv* env, + jint prefix_count, + char** prefixes); + + /* 75 : Get Bytecodes */ + jvmtiError (JNICALL *GetBytecodes) (jvmtiEnv* env, + jmethodID method, + jint* bytecode_count_ptr, + unsigned char** bytecodes_ptr); + + /* 76 : Is Method Native */ + jvmtiError (JNICALL *IsMethodNative) (jvmtiEnv* env, + jmethodID method, + jboolean* is_native_ptr); + + /* 77 : Is Method Synthetic */ + jvmtiError (JNICALL *IsMethodSynthetic) (jvmtiEnv* env, + jmethodID method, + jboolean* is_synthetic_ptr); + + /* 78 : Get Loaded Classes */ + jvmtiError (JNICALL *GetLoadedClasses) (jvmtiEnv* env, + jint* class_count_ptr, + jclass** classes_ptr); + + /* 79 : Get Classloader Classes */ + jvmtiError (JNICALL *GetClassLoaderClasses) (jvmtiEnv* env, + jobject initiating_loader, + jint* class_count_ptr, + jclass** classes_ptr); + + /* 80 : Pop Frame */ + jvmtiError (JNICALL *PopFrame) (jvmtiEnv* env, + jthread thread); + + /* 81 : Force Early Return - Object */ + jvmtiError (JNICALL *ForceEarlyReturnObject) (jvmtiEnv* env, + jthread thread, + jobject value); + + /* 82 : Force Early Return - Int */ + jvmtiError (JNICALL *ForceEarlyReturnInt) (jvmtiEnv* env, + jthread thread, + jint value); + + /* 83 : Force Early Return - Long */ + jvmtiError (JNICALL *ForceEarlyReturnLong) (jvmtiEnv* env, + jthread thread, + jlong value); + + /* 84 : Force Early Return - Float */ + jvmtiError (JNICALL *ForceEarlyReturnFloat) (jvmtiEnv* env, + jthread thread, + jfloat value); + + /* 85 : Force Early Return - Double */ + jvmtiError (JNICALL *ForceEarlyReturnDouble) (jvmtiEnv* env, + jthread thread, + jdouble value); + + /* 86 : Force Early Return - Void */ + jvmtiError (JNICALL *ForceEarlyReturnVoid) (jvmtiEnv* env, + jthread thread); + + /* 87 : Redefine Classes */ + jvmtiError (JNICALL *RedefineClasses) (jvmtiEnv* env, + jint class_count, + const jvmtiClassDefinition* class_definitions); + + /* 88 : Get Version Number */ + jvmtiError (JNICALL *GetVersionNumber) (jvmtiEnv* env, + jint* version_ptr); + + /* 89 : Get Capabilities */ + jvmtiError (JNICALL *GetCapabilities) (jvmtiEnv* env, + jvmtiCapabilities* capabilities_ptr); + + /* 90 : Get Source Debug Extension */ + jvmtiError (JNICALL *GetSourceDebugExtension) (jvmtiEnv* env, + jclass klass, + char** source_debug_extension_ptr); + + /* 91 : Is Method Obsolete */ + jvmtiError (JNICALL *IsMethodObsolete) (jvmtiEnv* env, + jmethodID method, + jboolean* is_obsolete_ptr); + + /* 92 : Suspend Thread List */ + jvmtiError (JNICALL *SuspendThreadList) (jvmtiEnv* env, + jint request_count, + const jthread* request_list, + jvmtiError* results); + + /* 93 : Resume Thread List */ + jvmtiError (JNICALL *ResumeThreadList) (jvmtiEnv* env, + jint request_count, + const jthread* request_list, + jvmtiError* results); + + /* 94 : Add Module Reads */ + jvmtiError (JNICALL *AddModuleReads) (jvmtiEnv* env, + jobject module, + jobject to_module); + + /* 95 : Add Module Exports */ + jvmtiError (JNICALL *AddModuleExports) (jvmtiEnv* env, + jobject module, + const char* pkg_name, + jobject to_module); + + /* 96 : Add Module Opens */ + jvmtiError (JNICALL *AddModuleOpens) (jvmtiEnv* env, + jobject module, + const char* pkg_name, + jobject to_module); + + /* 97 : Add Module Uses */ + jvmtiError (JNICALL *AddModuleUses) (jvmtiEnv* env, + jobject module, + jclass service); + + /* 98 : Add Module Provides */ + jvmtiError (JNICALL *AddModuleProvides) (jvmtiEnv* env, + jobject module, + jclass service, + jclass impl_class); + + /* 99 : Is Modifiable Module */ + jvmtiError (JNICALL *IsModifiableModule) (jvmtiEnv* env, + jobject module, + jboolean* is_modifiable_module_ptr); + + /* 100 : Get All Stack Traces */ + jvmtiError (JNICALL *GetAllStackTraces) (jvmtiEnv* env, + jint max_frame_count, + jvmtiStackInfo** stack_info_ptr, + jint* thread_count_ptr); + + /* 101 : Get Thread List Stack Traces */ + jvmtiError (JNICALL *GetThreadListStackTraces) (jvmtiEnv* env, + jint thread_count, + const jthread* thread_list, + jint max_frame_count, + jvmtiStackInfo** stack_info_ptr); + + /* 102 : Get Thread Local Storage */ + jvmtiError (JNICALL *GetThreadLocalStorage) (jvmtiEnv* env, + jthread thread, + void** data_ptr); + + /* 103 : Set Thread Local Storage */ + jvmtiError (JNICALL *SetThreadLocalStorage) (jvmtiEnv* env, + jthread thread, + const void* data); + + /* 104 : Get Stack Trace */ + jvmtiError (JNICALL *GetStackTrace) (jvmtiEnv* env, + jthread thread, + jint start_depth, + jint max_frame_count, + jvmtiFrameInfo* frame_buffer, + jint* count_ptr); + + /* 105 : RESERVED */ + void *reserved105; + + /* 106 : Get Tag */ + jvmtiError (JNICALL *GetTag) (jvmtiEnv* env, + jobject object, + jlong* tag_ptr); + + /* 107 : Set Tag */ + jvmtiError (JNICALL *SetTag) (jvmtiEnv* env, + jobject object, + jlong tag); + + /* 108 : Force Garbage Collection */ + jvmtiError (JNICALL *ForceGarbageCollection) (jvmtiEnv* env); + + /* 109 : Iterate Over Objects Reachable From Object */ + jvmtiError (JNICALL *IterateOverObjectsReachableFromObject) (jvmtiEnv* env, + jobject object, + jvmtiObjectReferenceCallback object_reference_callback, + const void* user_data); + + /* 110 : Iterate Over Reachable Objects */ + jvmtiError (JNICALL *IterateOverReachableObjects) (jvmtiEnv* env, + jvmtiHeapRootCallback heap_root_callback, + jvmtiStackReferenceCallback stack_ref_callback, + jvmtiObjectReferenceCallback object_ref_callback, + const void* user_data); + + /* 111 : Iterate Over Heap */ + jvmtiError (JNICALL *IterateOverHeap) (jvmtiEnv* env, + jvmtiHeapObjectFilter object_filter, + jvmtiHeapObjectCallback heap_object_callback, + const void* user_data); + + /* 112 : Iterate Over Instances Of Class */ + jvmtiError (JNICALL *IterateOverInstancesOfClass) (jvmtiEnv* env, + jclass klass, + jvmtiHeapObjectFilter object_filter, + jvmtiHeapObjectCallback heap_object_callback, + const void* user_data); + + /* 113 : RESERVED */ + void *reserved113; + + /* 114 : Get Objects With Tags */ + jvmtiError (JNICALL *GetObjectsWithTags) (jvmtiEnv* env, + jint tag_count, + const jlong* tags, + jint* count_ptr, + jobject** object_result_ptr, + jlong** tag_result_ptr); + + /* 115 : Follow References */ + jvmtiError (JNICALL *FollowReferences) (jvmtiEnv* env, + jint heap_filter, + jclass klass, + jobject initial_object, + const jvmtiHeapCallbacks* callbacks, + const void* user_data); + + /* 116 : Iterate Through Heap */ + jvmtiError (JNICALL *IterateThroughHeap) (jvmtiEnv* env, + jint heap_filter, + jclass klass, + const jvmtiHeapCallbacks* callbacks, + const void* user_data); + + /* 117 : RESERVED */ + void *reserved117; + + /* 118 : RESERVED */ + void *reserved118; + + /* 119 : RESERVED */ + void *reserved119; + + /* 120 : Set JNI Function Table */ + jvmtiError (JNICALL *SetJNIFunctionTable) (jvmtiEnv* env, + const jniNativeInterface* function_table); + + /* 121 : Get JNI Function Table */ + jvmtiError (JNICALL *GetJNIFunctionTable) (jvmtiEnv* env, + jniNativeInterface** function_table); + + /* 122 : Set Event Callbacks */ + jvmtiError (JNICALL *SetEventCallbacks) (jvmtiEnv* env, + const jvmtiEventCallbacks* callbacks, + jint size_of_callbacks); + + /* 123 : Generate Events */ + jvmtiError (JNICALL *GenerateEvents) (jvmtiEnv* env, + jvmtiEvent event_type); + + /* 124 : Get Extension Functions */ + jvmtiError (JNICALL *GetExtensionFunctions) (jvmtiEnv* env, + jint* extension_count_ptr, + jvmtiExtensionFunctionInfo** extensions); + + /* 125 : Get Extension Events */ + jvmtiError (JNICALL *GetExtensionEvents) (jvmtiEnv* env, + jint* extension_count_ptr, + jvmtiExtensionEventInfo** extensions); + + /* 126 : Set Extension Event Callback */ + jvmtiError (JNICALL *SetExtensionEventCallback) (jvmtiEnv* env, + jint extension_event_index, + jvmtiExtensionEvent callback); + + /* 127 : Dispose Environment */ + jvmtiError (JNICALL *DisposeEnvironment) (jvmtiEnv* env); + + /* 128 : Get Error Name */ + jvmtiError (JNICALL *GetErrorName) (jvmtiEnv* env, + jvmtiError error, + char** name_ptr); + + /* 129 : Get JLocation Format */ + jvmtiError (JNICALL *GetJLocationFormat) (jvmtiEnv* env, + jvmtiJlocationFormat* format_ptr); + + /* 130 : Get System Properties */ + jvmtiError (JNICALL *GetSystemProperties) (jvmtiEnv* env, + jint* count_ptr, + char*** property_ptr); + + /* 131 : Get System Property */ + jvmtiError (JNICALL *GetSystemProperty) (jvmtiEnv* env, + const char* property, + char** value_ptr); + + /* 132 : Set System Property */ + jvmtiError (JNICALL *SetSystemProperty) (jvmtiEnv* env, + const char* property, + const char* value_ptr); + + /* 133 : Get Phase */ + jvmtiError (JNICALL *GetPhase) (jvmtiEnv* env, + jvmtiPhase* phase_ptr); + + /* 134 : Get Current Thread CPU Timer Information */ + jvmtiError (JNICALL *GetCurrentThreadCpuTimerInfo) (jvmtiEnv* env, + jvmtiTimerInfo* info_ptr); + + /* 135 : Get Current Thread CPU Time */ + jvmtiError (JNICALL *GetCurrentThreadCpuTime) (jvmtiEnv* env, + jlong* nanos_ptr); + + /* 136 : Get Thread CPU Timer Information */ + jvmtiError (JNICALL *GetThreadCpuTimerInfo) (jvmtiEnv* env, + jvmtiTimerInfo* info_ptr); + + /* 137 : Get Thread CPU Time */ + jvmtiError (JNICALL *GetThreadCpuTime) (jvmtiEnv* env, + jthread thread, + jlong* nanos_ptr); + + /* 138 : Get Timer Information */ + jvmtiError (JNICALL *GetTimerInfo) (jvmtiEnv* env, + jvmtiTimerInfo* info_ptr); + + /* 139 : Get Time */ + jvmtiError (JNICALL *GetTime) (jvmtiEnv* env, + jlong* nanos_ptr); + + /* 140 : Get Potential Capabilities */ + jvmtiError (JNICALL *GetPotentialCapabilities) (jvmtiEnv* env, + jvmtiCapabilities* capabilities_ptr); + + /* 141 : RESERVED */ + void *reserved141; + + /* 142 : Add Capabilities */ + jvmtiError (JNICALL *AddCapabilities) (jvmtiEnv* env, + const jvmtiCapabilities* capabilities_ptr); + + /* 143 : Relinquish Capabilities */ + jvmtiError (JNICALL *RelinquishCapabilities) (jvmtiEnv* env, + const jvmtiCapabilities* capabilities_ptr); + + /* 144 : Get Available Processors */ + jvmtiError (JNICALL *GetAvailableProcessors) (jvmtiEnv* env, + jint* processor_count_ptr); + + /* 145 : Get Class Version Numbers */ + jvmtiError (JNICALL *GetClassVersionNumbers) (jvmtiEnv* env, + jclass klass, + jint* minor_version_ptr, + jint* major_version_ptr); + + /* 146 : Get Constant Pool */ + jvmtiError (JNICALL *GetConstantPool) (jvmtiEnv* env, + jclass klass, + jint* constant_pool_count_ptr, + jint* constant_pool_byte_count_ptr, + unsigned char** constant_pool_bytes_ptr); + + /* 147 : Get Environment Local Storage */ + jvmtiError (JNICALL *GetEnvironmentLocalStorage) (jvmtiEnv* env, + void** data_ptr); + + /* 148 : Set Environment Local Storage */ + jvmtiError (JNICALL *SetEnvironmentLocalStorage) (jvmtiEnv* env, + const void* data); + + /* 149 : Add To Bootstrap Class Loader Search */ + jvmtiError (JNICALL *AddToBootstrapClassLoaderSearch) (jvmtiEnv* env, + const char* segment); + + /* 150 : Set Verbose Flag */ + jvmtiError (JNICALL *SetVerboseFlag) (jvmtiEnv* env, + jvmtiVerboseFlag flag, + jboolean value); + + /* 151 : Add To System Class Loader Search */ + jvmtiError (JNICALL *AddToSystemClassLoaderSearch) (jvmtiEnv* env, + const char* segment); + + /* 152 : Retransform Classes */ + jvmtiError (JNICALL *RetransformClasses) (jvmtiEnv* env, + jint class_count, + const jclass* classes); + + /* 153 : Get Owned Monitor Stack Depth Info */ + jvmtiError (JNICALL *GetOwnedMonitorStackDepthInfo) (jvmtiEnv* env, + jthread thread, + jint* monitor_info_count_ptr, + jvmtiMonitorStackDepthInfo** monitor_info_ptr); + + /* 154 : Get Object Size */ + jvmtiError (JNICALL *GetObjectSize) (jvmtiEnv* env, + jobject object, + jlong* size_ptr); + + /* 155 : Get Local Instance */ + jvmtiError (JNICALL *GetLocalInstance) (jvmtiEnv* env, + jthread thread, + jint depth, + jobject* value_ptr); + + /* 156 : Set Heap Sampling Interval */ + jvmtiError (JNICALL *SetHeapSamplingInterval) (jvmtiEnv* env, + jint sampling_interval); + +} jvmtiInterface_1; + +struct _jvmtiEnv { + const struct jvmtiInterface_1_ *functions; +#ifdef __cplusplus + + + jvmtiError Allocate(jlong size, + unsigned char** mem_ptr) { + return functions->Allocate(this, size, mem_ptr); + } + + jvmtiError Deallocate(unsigned char* mem) { + return functions->Deallocate(this, mem); + } + + jvmtiError GetThreadState(jthread thread, + jint* thread_state_ptr) { + return functions->GetThreadState(this, thread, thread_state_ptr); + } + + jvmtiError GetCurrentThread(jthread* thread_ptr) { + return functions->GetCurrentThread(this, thread_ptr); + } + + jvmtiError GetAllThreads(jint* threads_count_ptr, + jthread** threads_ptr) { + return functions->GetAllThreads(this, threads_count_ptr, threads_ptr); + } + + jvmtiError SuspendThread(jthread thread) { + return functions->SuspendThread(this, thread); + } + + jvmtiError SuspendThreadList(jint request_count, + const jthread* request_list, + jvmtiError* results) { + return functions->SuspendThreadList(this, request_count, request_list, results); + } + + jvmtiError ResumeThread(jthread thread) { + return functions->ResumeThread(this, thread); + } + + jvmtiError ResumeThreadList(jint request_count, + const jthread* request_list, + jvmtiError* results) { + return functions->ResumeThreadList(this, request_count, request_list, results); + } + + jvmtiError StopThread(jthread thread, + jobject exception) { + return functions->StopThread(this, thread, exception); + } + + jvmtiError InterruptThread(jthread thread) { + return functions->InterruptThread(this, thread); + } + + jvmtiError GetThreadInfo(jthread thread, + jvmtiThreadInfo* info_ptr) { + return functions->GetThreadInfo(this, thread, info_ptr); + } + + jvmtiError GetOwnedMonitorInfo(jthread thread, + jint* owned_monitor_count_ptr, + jobject** owned_monitors_ptr) { + return functions->GetOwnedMonitorInfo(this, thread, owned_monitor_count_ptr, owned_monitors_ptr); + } + + jvmtiError GetOwnedMonitorStackDepthInfo(jthread thread, + jint* monitor_info_count_ptr, + jvmtiMonitorStackDepthInfo** monitor_info_ptr) { + return functions->GetOwnedMonitorStackDepthInfo(this, thread, monitor_info_count_ptr, monitor_info_ptr); + } + + jvmtiError GetCurrentContendedMonitor(jthread thread, + jobject* monitor_ptr) { + return functions->GetCurrentContendedMonitor(this, thread, monitor_ptr); + } + + jvmtiError RunAgentThread(jthread thread, + jvmtiStartFunction proc, + const void* arg, + jint priority) { + return functions->RunAgentThread(this, thread, proc, arg, priority); + } + + jvmtiError SetThreadLocalStorage(jthread thread, + const void* data) { + return functions->SetThreadLocalStorage(this, thread, data); + } + + jvmtiError GetThreadLocalStorage(jthread thread, + void** data_ptr) { + return functions->GetThreadLocalStorage(this, thread, data_ptr); + } + + jvmtiError GetTopThreadGroups(jint* group_count_ptr, + jthreadGroup** groups_ptr) { + return functions->GetTopThreadGroups(this, group_count_ptr, groups_ptr); + } + + jvmtiError GetThreadGroupInfo(jthreadGroup group, + jvmtiThreadGroupInfo* info_ptr) { + return functions->GetThreadGroupInfo(this, group, info_ptr); + } + + jvmtiError GetThreadGroupChildren(jthreadGroup group, + jint* thread_count_ptr, + jthread** threads_ptr, + jint* group_count_ptr, + jthreadGroup** groups_ptr) { + return functions->GetThreadGroupChildren(this, group, thread_count_ptr, threads_ptr, group_count_ptr, groups_ptr); + } + + jvmtiError GetStackTrace(jthread thread, + jint start_depth, + jint max_frame_count, + jvmtiFrameInfo* frame_buffer, + jint* count_ptr) { + return functions->GetStackTrace(this, thread, start_depth, max_frame_count, frame_buffer, count_ptr); + } + + jvmtiError GetAllStackTraces(jint max_frame_count, + jvmtiStackInfo** stack_info_ptr, + jint* thread_count_ptr) { + return functions->GetAllStackTraces(this, max_frame_count, stack_info_ptr, thread_count_ptr); + } + + jvmtiError GetThreadListStackTraces(jint thread_count, + const jthread* thread_list, + jint max_frame_count, + jvmtiStackInfo** stack_info_ptr) { + return functions->GetThreadListStackTraces(this, thread_count, thread_list, max_frame_count, stack_info_ptr); + } + + jvmtiError GetFrameCount(jthread thread, + jint* count_ptr) { + return functions->GetFrameCount(this, thread, count_ptr); + } + + jvmtiError PopFrame(jthread thread) { + return functions->PopFrame(this, thread); + } + + jvmtiError GetFrameLocation(jthread thread, + jint depth, + jmethodID* method_ptr, + jlocation* location_ptr) { + return functions->GetFrameLocation(this, thread, depth, method_ptr, location_ptr); + } + + jvmtiError NotifyFramePop(jthread thread, + jint depth) { + return functions->NotifyFramePop(this, thread, depth); + } + + jvmtiError ForceEarlyReturnObject(jthread thread, + jobject value) { + return functions->ForceEarlyReturnObject(this, thread, value); + } + + jvmtiError ForceEarlyReturnInt(jthread thread, + jint value) { + return functions->ForceEarlyReturnInt(this, thread, value); + } + + jvmtiError ForceEarlyReturnLong(jthread thread, + jlong value) { + return functions->ForceEarlyReturnLong(this, thread, value); + } + + jvmtiError ForceEarlyReturnFloat(jthread thread, + jfloat value) { + return functions->ForceEarlyReturnFloat(this, thread, value); + } + + jvmtiError ForceEarlyReturnDouble(jthread thread, + jdouble value) { + return functions->ForceEarlyReturnDouble(this, thread, value); + } + + jvmtiError ForceEarlyReturnVoid(jthread thread) { + return functions->ForceEarlyReturnVoid(this, thread); + } + + jvmtiError FollowReferences(jint heap_filter, + jclass klass, + jobject initial_object, + const jvmtiHeapCallbacks* callbacks, + const void* user_data) { + return functions->FollowReferences(this, heap_filter, klass, initial_object, callbacks, user_data); + } + + jvmtiError IterateThroughHeap(jint heap_filter, + jclass klass, + const jvmtiHeapCallbacks* callbacks, + const void* user_data) { + return functions->IterateThroughHeap(this, heap_filter, klass, callbacks, user_data); + } + + jvmtiError GetTag(jobject object, + jlong* tag_ptr) { + return functions->GetTag(this, object, tag_ptr); + } + + jvmtiError SetTag(jobject object, + jlong tag) { + return functions->SetTag(this, object, tag); + } + + jvmtiError GetObjectsWithTags(jint tag_count, + const jlong* tags, + jint* count_ptr, + jobject** object_result_ptr, + jlong** tag_result_ptr) { + return functions->GetObjectsWithTags(this, tag_count, tags, count_ptr, object_result_ptr, tag_result_ptr); + } + + jvmtiError ForceGarbageCollection() { + return functions->ForceGarbageCollection(this); + } + + jvmtiError IterateOverObjectsReachableFromObject(jobject object, + jvmtiObjectReferenceCallback object_reference_callback, + const void* user_data) { + return functions->IterateOverObjectsReachableFromObject(this, object, object_reference_callback, user_data); + } + + jvmtiError IterateOverReachableObjects(jvmtiHeapRootCallback heap_root_callback, + jvmtiStackReferenceCallback stack_ref_callback, + jvmtiObjectReferenceCallback object_ref_callback, + const void* user_data) { + return functions->IterateOverReachableObjects(this, heap_root_callback, stack_ref_callback, object_ref_callback, user_data); + } + + jvmtiError IterateOverHeap(jvmtiHeapObjectFilter object_filter, + jvmtiHeapObjectCallback heap_object_callback, + const void* user_data) { + return functions->IterateOverHeap(this, object_filter, heap_object_callback, user_data); + } + + jvmtiError IterateOverInstancesOfClass(jclass klass, + jvmtiHeapObjectFilter object_filter, + jvmtiHeapObjectCallback heap_object_callback, + const void* user_data) { + return functions->IterateOverInstancesOfClass(this, klass, object_filter, heap_object_callback, user_data); + } + + jvmtiError GetLocalObject(jthread thread, + jint depth, + jint slot, + jobject* value_ptr) { + return functions->GetLocalObject(this, thread, depth, slot, value_ptr); + } + + jvmtiError GetLocalInstance(jthread thread, + jint depth, + jobject* value_ptr) { + return functions->GetLocalInstance(this, thread, depth, value_ptr); + } + + jvmtiError GetLocalInt(jthread thread, + jint depth, + jint slot, + jint* value_ptr) { + return functions->GetLocalInt(this, thread, depth, slot, value_ptr); + } + + jvmtiError GetLocalLong(jthread thread, + jint depth, + jint slot, + jlong* value_ptr) { + return functions->GetLocalLong(this, thread, depth, slot, value_ptr); + } + + jvmtiError GetLocalFloat(jthread thread, + jint depth, + jint slot, + jfloat* value_ptr) { + return functions->GetLocalFloat(this, thread, depth, slot, value_ptr); + } + + jvmtiError GetLocalDouble(jthread thread, + jint depth, + jint slot, + jdouble* value_ptr) { + return functions->GetLocalDouble(this, thread, depth, slot, value_ptr); + } + + jvmtiError SetLocalObject(jthread thread, + jint depth, + jint slot, + jobject value) { + return functions->SetLocalObject(this, thread, depth, slot, value); + } + + jvmtiError SetLocalInt(jthread thread, + jint depth, + jint slot, + jint value) { + return functions->SetLocalInt(this, thread, depth, slot, value); + } + + jvmtiError SetLocalLong(jthread thread, + jint depth, + jint slot, + jlong value) { + return functions->SetLocalLong(this, thread, depth, slot, value); + } + + jvmtiError SetLocalFloat(jthread thread, + jint depth, + jint slot, + jfloat value) { + return functions->SetLocalFloat(this, thread, depth, slot, value); + } + + jvmtiError SetLocalDouble(jthread thread, + jint depth, + jint slot, + jdouble value) { + return functions->SetLocalDouble(this, thread, depth, slot, value); + } + + jvmtiError SetBreakpoint(jmethodID method, + jlocation location) { + return functions->SetBreakpoint(this, method, location); + } + + jvmtiError ClearBreakpoint(jmethodID method, + jlocation location) { + return functions->ClearBreakpoint(this, method, location); + } + + jvmtiError SetFieldAccessWatch(jclass klass, + jfieldID field) { + return functions->SetFieldAccessWatch(this, klass, field); + } + + jvmtiError ClearFieldAccessWatch(jclass klass, + jfieldID field) { + return functions->ClearFieldAccessWatch(this, klass, field); + } + + jvmtiError SetFieldModificationWatch(jclass klass, + jfieldID field) { + return functions->SetFieldModificationWatch(this, klass, field); + } + + jvmtiError ClearFieldModificationWatch(jclass klass, + jfieldID field) { + return functions->ClearFieldModificationWatch(this, klass, field); + } + + jvmtiError GetAllModules(jint* module_count_ptr, + jobject** modules_ptr) { + return functions->GetAllModules(this, module_count_ptr, modules_ptr); + } + + jvmtiError GetNamedModule(jobject class_loader, + const char* package_name, + jobject* module_ptr) { + return functions->GetNamedModule(this, class_loader, package_name, module_ptr); + } + + jvmtiError AddModuleReads(jobject module, + jobject to_module) { + return functions->AddModuleReads(this, module, to_module); + } + + jvmtiError AddModuleExports(jobject module, + const char* pkg_name, + jobject to_module) { + return functions->AddModuleExports(this, module, pkg_name, to_module); + } + + jvmtiError AddModuleOpens(jobject module, + const char* pkg_name, + jobject to_module) { + return functions->AddModuleOpens(this, module, pkg_name, to_module); + } + + jvmtiError AddModuleUses(jobject module, + jclass service) { + return functions->AddModuleUses(this, module, service); + } + + jvmtiError AddModuleProvides(jobject module, + jclass service, + jclass impl_class) { + return functions->AddModuleProvides(this, module, service, impl_class); + } + + jvmtiError IsModifiableModule(jobject module, + jboolean* is_modifiable_module_ptr) { + return functions->IsModifiableModule(this, module, is_modifiable_module_ptr); + } + + jvmtiError GetLoadedClasses(jint* class_count_ptr, + jclass** classes_ptr) { + return functions->GetLoadedClasses(this, class_count_ptr, classes_ptr); + } + + jvmtiError GetClassLoaderClasses(jobject initiating_loader, + jint* class_count_ptr, + jclass** classes_ptr) { + return functions->GetClassLoaderClasses(this, initiating_loader, class_count_ptr, classes_ptr); + } + + jvmtiError GetClassSignature(jclass klass, + char** signature_ptr, + char** generic_ptr) { + return functions->GetClassSignature(this, klass, signature_ptr, generic_ptr); + } + + jvmtiError GetClassStatus(jclass klass, + jint* status_ptr) { + return functions->GetClassStatus(this, klass, status_ptr); + } + + jvmtiError GetSourceFileName(jclass klass, + char** source_name_ptr) { + return functions->GetSourceFileName(this, klass, source_name_ptr); + } + + jvmtiError GetClassModifiers(jclass klass, + jint* modifiers_ptr) { + return functions->GetClassModifiers(this, klass, modifiers_ptr); + } + + jvmtiError GetClassMethods(jclass klass, + jint* method_count_ptr, + jmethodID** methods_ptr) { + return functions->GetClassMethods(this, klass, method_count_ptr, methods_ptr); + } + + jvmtiError GetClassFields(jclass klass, + jint* field_count_ptr, + jfieldID** fields_ptr) { + return functions->GetClassFields(this, klass, field_count_ptr, fields_ptr); + } + + jvmtiError GetImplementedInterfaces(jclass klass, + jint* interface_count_ptr, + jclass** interfaces_ptr) { + return functions->GetImplementedInterfaces(this, klass, interface_count_ptr, interfaces_ptr); + } + + jvmtiError GetClassVersionNumbers(jclass klass, + jint* minor_version_ptr, + jint* major_version_ptr) { + return functions->GetClassVersionNumbers(this, klass, minor_version_ptr, major_version_ptr); + } + + jvmtiError GetConstantPool(jclass klass, + jint* constant_pool_count_ptr, + jint* constant_pool_byte_count_ptr, + unsigned char** constant_pool_bytes_ptr) { + return functions->GetConstantPool(this, klass, constant_pool_count_ptr, constant_pool_byte_count_ptr, constant_pool_bytes_ptr); + } + + jvmtiError IsInterface(jclass klass, + jboolean* is_interface_ptr) { + return functions->IsInterface(this, klass, is_interface_ptr); + } + + jvmtiError IsArrayClass(jclass klass, + jboolean* is_array_class_ptr) { + return functions->IsArrayClass(this, klass, is_array_class_ptr); + } + + jvmtiError IsModifiableClass(jclass klass, + jboolean* is_modifiable_class_ptr) { + return functions->IsModifiableClass(this, klass, is_modifiable_class_ptr); + } + + jvmtiError GetClassLoader(jclass klass, + jobject* classloader_ptr) { + return functions->GetClassLoader(this, klass, classloader_ptr); + } + + jvmtiError GetSourceDebugExtension(jclass klass, + char** source_debug_extension_ptr) { + return functions->GetSourceDebugExtension(this, klass, source_debug_extension_ptr); + } + + jvmtiError RetransformClasses(jint class_count, + const jclass* classes) { + return functions->RetransformClasses(this, class_count, classes); + } + + jvmtiError RedefineClasses(jint class_count, + const jvmtiClassDefinition* class_definitions) { + return functions->RedefineClasses(this, class_count, class_definitions); + } + + jvmtiError GetObjectSize(jobject object, + jlong* size_ptr) { + return functions->GetObjectSize(this, object, size_ptr); + } + + jvmtiError GetObjectHashCode(jobject object, + jint* hash_code_ptr) { + return functions->GetObjectHashCode(this, object, hash_code_ptr); + } + + jvmtiError GetObjectMonitorUsage(jobject object, + jvmtiMonitorUsage* info_ptr) { + return functions->GetObjectMonitorUsage(this, object, info_ptr); + } + + jvmtiError GetFieldName(jclass klass, + jfieldID field, + char** name_ptr, + char** signature_ptr, + char** generic_ptr) { + return functions->GetFieldName(this, klass, field, name_ptr, signature_ptr, generic_ptr); + } + + jvmtiError GetFieldDeclaringClass(jclass klass, + jfieldID field, + jclass* declaring_class_ptr) { + return functions->GetFieldDeclaringClass(this, klass, field, declaring_class_ptr); + } + + jvmtiError GetFieldModifiers(jclass klass, + jfieldID field, + jint* modifiers_ptr) { + return functions->GetFieldModifiers(this, klass, field, modifiers_ptr); + } + + jvmtiError IsFieldSynthetic(jclass klass, + jfieldID field, + jboolean* is_synthetic_ptr) { + return functions->IsFieldSynthetic(this, klass, field, is_synthetic_ptr); + } + + jvmtiError GetMethodName(jmethodID method, + char** name_ptr, + char** signature_ptr, + char** generic_ptr) { + return functions->GetMethodName(this, method, name_ptr, signature_ptr, generic_ptr); + } + + jvmtiError GetMethodDeclaringClass(jmethodID method, + jclass* declaring_class_ptr) { + return functions->GetMethodDeclaringClass(this, method, declaring_class_ptr); + } + + jvmtiError GetMethodModifiers(jmethodID method, + jint* modifiers_ptr) { + return functions->GetMethodModifiers(this, method, modifiers_ptr); + } + + jvmtiError GetMaxLocals(jmethodID method, + jint* max_ptr) { + return functions->GetMaxLocals(this, method, max_ptr); + } + + jvmtiError GetArgumentsSize(jmethodID method, + jint* size_ptr) { + return functions->GetArgumentsSize(this, method, size_ptr); + } + + jvmtiError GetLineNumberTable(jmethodID method, + jint* entry_count_ptr, + jvmtiLineNumberEntry** table_ptr) { + return functions->GetLineNumberTable(this, method, entry_count_ptr, table_ptr); + } + + jvmtiError GetMethodLocation(jmethodID method, + jlocation* start_location_ptr, + jlocation* end_location_ptr) { + return functions->GetMethodLocation(this, method, start_location_ptr, end_location_ptr); + } + + jvmtiError GetLocalVariableTable(jmethodID method, + jint* entry_count_ptr, + jvmtiLocalVariableEntry** table_ptr) { + return functions->GetLocalVariableTable(this, method, entry_count_ptr, table_ptr); + } + + jvmtiError GetBytecodes(jmethodID method, + jint* bytecode_count_ptr, + unsigned char** bytecodes_ptr) { + return functions->GetBytecodes(this, method, bytecode_count_ptr, bytecodes_ptr); + } + + jvmtiError IsMethodNative(jmethodID method, + jboolean* is_native_ptr) { + return functions->IsMethodNative(this, method, is_native_ptr); + } + + jvmtiError IsMethodSynthetic(jmethodID method, + jboolean* is_synthetic_ptr) { + return functions->IsMethodSynthetic(this, method, is_synthetic_ptr); + } + + jvmtiError IsMethodObsolete(jmethodID method, + jboolean* is_obsolete_ptr) { + return functions->IsMethodObsolete(this, method, is_obsolete_ptr); + } + + jvmtiError SetNativeMethodPrefix(const char* prefix) { + return functions->SetNativeMethodPrefix(this, prefix); + } + + jvmtiError SetNativeMethodPrefixes(jint prefix_count, + char** prefixes) { + return functions->SetNativeMethodPrefixes(this, prefix_count, prefixes); + } + + jvmtiError CreateRawMonitor(const char* name, + jrawMonitorID* monitor_ptr) { + return functions->CreateRawMonitor(this, name, monitor_ptr); + } + + jvmtiError DestroyRawMonitor(jrawMonitorID monitor) { + return functions->DestroyRawMonitor(this, monitor); + } + + jvmtiError RawMonitorEnter(jrawMonitorID monitor) { + return functions->RawMonitorEnter(this, monitor); + } + + jvmtiError RawMonitorExit(jrawMonitorID monitor) { + return functions->RawMonitorExit(this, monitor); + } + + jvmtiError RawMonitorWait(jrawMonitorID monitor, + jlong millis) { + return functions->RawMonitorWait(this, monitor, millis); + } + + jvmtiError RawMonitorNotify(jrawMonitorID monitor) { + return functions->RawMonitorNotify(this, monitor); + } + + jvmtiError RawMonitorNotifyAll(jrawMonitorID monitor) { + return functions->RawMonitorNotifyAll(this, monitor); + } + + jvmtiError SetJNIFunctionTable(const jniNativeInterface* function_table) { + return functions->SetJNIFunctionTable(this, function_table); + } + + jvmtiError GetJNIFunctionTable(jniNativeInterface** function_table) { + return functions->GetJNIFunctionTable(this, function_table); + } + + jvmtiError SetEventCallbacks(const jvmtiEventCallbacks* callbacks, + jint size_of_callbacks) { + return functions->SetEventCallbacks(this, callbacks, size_of_callbacks); + } + + jvmtiError SetEventNotificationMode(jvmtiEventMode mode, + jvmtiEvent event_type, + jthread event_thread, + ...) { + return functions->SetEventNotificationMode(this, mode, event_type, event_thread); + } + + jvmtiError GenerateEvents(jvmtiEvent event_type) { + return functions->GenerateEvents(this, event_type); + } + + jvmtiError GetExtensionFunctions(jint* extension_count_ptr, + jvmtiExtensionFunctionInfo** extensions) { + return functions->GetExtensionFunctions(this, extension_count_ptr, extensions); + } + + jvmtiError GetExtensionEvents(jint* extension_count_ptr, + jvmtiExtensionEventInfo** extensions) { + return functions->GetExtensionEvents(this, extension_count_ptr, extensions); + } + + jvmtiError SetExtensionEventCallback(jint extension_event_index, + jvmtiExtensionEvent callback) { + return functions->SetExtensionEventCallback(this, extension_event_index, callback); + } + + jvmtiError GetPotentialCapabilities(jvmtiCapabilities* capabilities_ptr) { + return functions->GetPotentialCapabilities(this, capabilities_ptr); + } + + jvmtiError AddCapabilities(const jvmtiCapabilities* capabilities_ptr) { + return functions->AddCapabilities(this, capabilities_ptr); + } + + jvmtiError RelinquishCapabilities(const jvmtiCapabilities* capabilities_ptr) { + return functions->RelinquishCapabilities(this, capabilities_ptr); + } + + jvmtiError GetCapabilities(jvmtiCapabilities* capabilities_ptr) { + return functions->GetCapabilities(this, capabilities_ptr); + } + + jvmtiError GetCurrentThreadCpuTimerInfo(jvmtiTimerInfo* info_ptr) { + return functions->GetCurrentThreadCpuTimerInfo(this, info_ptr); + } + + jvmtiError GetCurrentThreadCpuTime(jlong* nanos_ptr) { + return functions->GetCurrentThreadCpuTime(this, nanos_ptr); + } + + jvmtiError GetThreadCpuTimerInfo(jvmtiTimerInfo* info_ptr) { + return functions->GetThreadCpuTimerInfo(this, info_ptr); + } + + jvmtiError GetThreadCpuTime(jthread thread, + jlong* nanos_ptr) { + return functions->GetThreadCpuTime(this, thread, nanos_ptr); + } + + jvmtiError GetTimerInfo(jvmtiTimerInfo* info_ptr) { + return functions->GetTimerInfo(this, info_ptr); + } + + jvmtiError GetTime(jlong* nanos_ptr) { + return functions->GetTime(this, nanos_ptr); + } + + jvmtiError GetAvailableProcessors(jint* processor_count_ptr) { + return functions->GetAvailableProcessors(this, processor_count_ptr); + } + + jvmtiError AddToBootstrapClassLoaderSearch(const char* segment) { + return functions->AddToBootstrapClassLoaderSearch(this, segment); + } + + jvmtiError AddToSystemClassLoaderSearch(const char* segment) { + return functions->AddToSystemClassLoaderSearch(this, segment); + } + + jvmtiError GetSystemProperties(jint* count_ptr, + char*** property_ptr) { + return functions->GetSystemProperties(this, count_ptr, property_ptr); + } + + jvmtiError GetSystemProperty(const char* property, + char** value_ptr) { + return functions->GetSystemProperty(this, property, value_ptr); + } + + jvmtiError SetSystemProperty(const char* property, + const char* value_ptr) { + return functions->SetSystemProperty(this, property, value_ptr); + } + + jvmtiError GetPhase(jvmtiPhase* phase_ptr) { + return functions->GetPhase(this, phase_ptr); + } + + jvmtiError DisposeEnvironment() { + return functions->DisposeEnvironment(this); + } + + jvmtiError SetEnvironmentLocalStorage(const void* data) { + return functions->SetEnvironmentLocalStorage(this, data); + } + + jvmtiError GetEnvironmentLocalStorage(void** data_ptr) { + return functions->GetEnvironmentLocalStorage(this, data_ptr); + } + + jvmtiError GetVersionNumber(jint* version_ptr) { + return functions->GetVersionNumber(this, version_ptr); + } + + jvmtiError GetErrorName(jvmtiError error, + char** name_ptr) { + return functions->GetErrorName(this, error, name_ptr); + } + + jvmtiError SetVerboseFlag(jvmtiVerboseFlag flag, + jboolean value) { + return functions->SetVerboseFlag(this, flag, value); + } + + jvmtiError GetJLocationFormat(jvmtiJlocationFormat* format_ptr) { + return functions->GetJLocationFormat(this, format_ptr); + } + + jvmtiError SetHeapSamplingInterval(jint sampling_interval) { + return functions->SetHeapSamplingInterval(this, sampling_interval); + } + +#endif /* __cplusplus */ +}; + + +#ifdef __cplusplus +} /* extern "C" */ +#endif /* __cplusplus */ + +#endif /* !_JAVA_JVMTI_H_ */ diff --git a/jalview_java/include/jvmticmlr.h b/jalview_java/include/jvmticmlr.h new file mode 100644 index 0000000..c2106d3 --- /dev/null +++ b/jalview_java/include/jvmticmlr.h @@ -0,0 +1,115 @@ +/* + * Copyright (c) 2010, Oracle and/or its affiliates. All rights reserved. + * DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. + * + * This code is free software; you can redistribute it and/or modify it + * under the terms of the GNU General Public License version 2 only, as + * published by the Free Software Foundation. Oracle designates this + * particular file as subject to the "Classpath" exception as provided + * by Oracle in the LICENSE file that accompanied this code. + * + * This code is distributed in the hope that it will be useful, but WITHOUT + * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or + * FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License + * version 2 for more details (a copy is included in the LICENSE file that + * accompanied this code). + * + * You should have received a copy of the GNU General Public License version + * 2 along with this work; if not, write to the Free Software Foundation, + * Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. + * + * Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA + * or visit www.oracle.com if you need additional information or have any + * questions. + */ + +/* + * This header file defines the data structures sent by the VM + * through the JVMTI CompiledMethodLoad callback function via the + * "void * compile_info" parameter. The memory pointed to by the + * compile_info parameter may not be referenced after returning from + * the CompiledMethodLoad callback. These are VM implementation + * specific data structures that may evolve in future releases. A + * JVMTI agent should interpret a non-NULL compile_info as a pointer + * to a region of memory containing a list of records. In a typical + * usage scenario, a JVMTI agent would cast each record to a + * jvmtiCompiledMethodLoadRecordHeader, a struct that represents + * arbitrary information. This struct contains a kind field to indicate + * the kind of information being passed, and a pointer to the next + * record. If the kind field indicates inlining information, then the + * agent would cast the record to a jvmtiCompiledMethodLoadInlineRecord. + * This record contains an array of PCStackInfo structs, which indicate + * for every pc address what are the methods on the invocation stack. + * The "methods" and "bcis" fields in each PCStackInfo struct specify a + * 1-1 mapping between these inlined methods and their bytecode indices. + * This can be used to derive the proper source lines of the inlined + * methods. + */ + +#ifndef _JVMTI_CMLR_H_ +#define _JVMTI_CMLR_H_ + +enum { + JVMTI_CMLR_MAJOR_VERSION_1 = 0x00000001, + JVMTI_CMLR_MINOR_VERSION_0 = 0x00000000, + + JVMTI_CMLR_MAJOR_VERSION = 0x00000001, + JVMTI_CMLR_MINOR_VERSION = 0x00000000 + + /* + * This comment is for the "JDK import from HotSpot" sanity check: + * version: 1.0.0 + */ +}; + +typedef enum { + JVMTI_CMLR_DUMMY = 1, + JVMTI_CMLR_INLINE_INFO = 2 +} jvmtiCMLRKind; + +/* + * Record that represents arbitrary information passed through JVMTI + * CompiledMethodLoadEvent void pointer. + */ +typedef struct _jvmtiCompiledMethodLoadRecordHeader { + jvmtiCMLRKind kind; /* id for the kind of info passed in the record */ + jint majorinfoversion; /* major and minor info version values. Init'ed */ + jint minorinfoversion; /* to current version value in jvmtiExport.cpp. */ + + struct _jvmtiCompiledMethodLoadRecordHeader* next; +} jvmtiCompiledMethodLoadRecordHeader; + +/* + * Record that gives information about the methods on the compile-time + * stack at a specific pc address of a compiled method. Each element in + * the methods array maps to same element in the bcis array. + */ +typedef struct _PCStackInfo { + void* pc; /* the pc address for this compiled method */ + jint numstackframes; /* number of methods on the stack */ + jmethodID* methods; /* array of numstackframes method ids */ + jint* bcis; /* array of numstackframes bytecode indices */ +} PCStackInfo; + +/* + * Record that contains inlining information for each pc address of + * an nmethod. + */ +typedef struct _jvmtiCompiledMethodLoadInlineRecord { + jvmtiCompiledMethodLoadRecordHeader header; /* common header for casting */ + jint numpcs; /* number of pc descriptors in this nmethod */ + PCStackInfo* pcinfo; /* array of numpcs pc descriptors */ +} jvmtiCompiledMethodLoadInlineRecord; + +/* + * Dummy record used to test that we can pass records with different + * information through the void pointer provided that they can be cast + * to a jvmtiCompiledMethodLoadRecordHeader. + */ + +typedef struct _jvmtiCompiledMethodLoadDummyRecord { + jvmtiCompiledMethodLoadRecordHeader header; /* common header for casting */ + char message[50]; +} jvmtiCompiledMethodLoadDummyRecord; + +#endif diff --git a/jalview_java/legal/java.base/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/java.base/ADDITIONAL_LICENSE_INFO new file mode 100644 index 0000000..ff700cd --- /dev/null +++ b/jalview_java/legal/java.base/ADDITIONAL_LICENSE_INFO @@ -0,0 +1,37 @@ + ADDITIONAL INFORMATION ABOUT LICENSING + +Certain files distributed by Oracle America, Inc. and/or its affiliates are +subject to the following clarification and special exception to the GPLv2, +based on the GNU Project exception for its Classpath libraries, known as the +GNU Classpath Exception. + +Note that Oracle includes multiple, independent programs in this software +package. Some of those programs are provided under licenses deemed +incompatible with the GPLv2 by the Free Software Foundation and others. +For example, the package includes programs licensed under the Apache +License, Version 2.0 and may include FreeType. Such programs are licensed +to you under their original licenses. + +Oracle facilitates your further distribution of this package by adding the +Classpath Exception to the necessary parts of its GPLv2 code, which permits +you to use that code in combination with other independent modules not +licensed under the GPLv2. However, note that this would not permit you to +commingle code under an incompatible license with Oracle's GPLv2 licensed +code by, for example, cutting and pasting such code into a file also +containing Oracle's GPLv2 licensed code and then distributing the result. + +Additionally, if you were to remove the Classpath Exception from any of the +files to which it applies and distribute the result, you would likely be +required to license some or all of the other code in that distribution under +the GPLv2 as well, and since the GPLv2 is incompatible with the license terms +of some items included in the distribution by Oracle, removing the Classpath +Exception could therefore effectively compromise your ability to further +distribute the package. + +Failing to distribute notices associated with some files may also create +unexpected legal consequences. + +Proceed with caution and we recommend that you obtain the advice of a lawyer +skilled in open source matters before removing the Classpath Exception or +making modifications to this package which may subsequently be redistributed +and/or involve the use of third party software. diff --git a/jalview_java/legal/java.base/ASSEMBLY_EXCEPTION b/jalview_java/legal/java.base/ASSEMBLY_EXCEPTION new file mode 100644 index 0000000..065b8d9 --- /dev/null +++ b/jalview_java/legal/java.base/ASSEMBLY_EXCEPTION @@ -0,0 +1,27 @@ + +OPENJDK ASSEMBLY EXCEPTION + +The OpenJDK source code made available by Oracle America, Inc. (Oracle) at +openjdk.java.net ("OpenJDK Code") is distributed under the terms of the GNU +General Public License version 2 +only ("GPL2"), with the following clarification and special exception. + + Linking this OpenJDK Code statically or dynamically with other code + is making a combined work based on this library. Thus, the terms + and conditions of GPL2 cover the whole combination. + + As a special exception, Oracle gives you permission to link this + OpenJDK Code with certain code licensed by Oracle as indicated at + http://openjdk.java.net/legal/exception-modules-2007-05-08.html + ("Designated Exception Modules") to produce an executable, + regardless of the license terms of the Designated Exception Modules, + and to copy and distribute the resulting executable under GPL2, + provided that the Designated Exception Modules continue to be + governed by the licenses under which they were offered by Oracle. + +As such, it allows licensees and sublicensees of Oracle's GPL2 OpenJDK Code +to build an executable that includes those portions of necessary code that +Oracle could not provide under GPL2 (or that Oracle has provided under GPL2 +with the Classpath exception). If you modify or add to the OpenJDK code, +that new GPL2 code may still be combined with Designated Exception Modules +if the new code is made subject to this exception by its copyright holder. diff --git a/jalview_java/legal/java.base/LICENSE b/jalview_java/legal/java.base/LICENSE new file mode 100644 index 0000000..8b400c7 --- /dev/null +++ b/jalview_java/legal/java.base/LICENSE @@ -0,0 +1,347 @@ +The GNU General Public License (GPL) + +Version 2, June 1991 + +Copyright (C) 1989, 1991 Free Software Foundation, Inc. +51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA + +Everyone is permitted to copy and distribute verbatim copies of this license +document, but changing it is not allowed. + +Preamble + +The licenses for most software are designed to take away your freedom to share +and change it. By contrast, the GNU General Public License is intended to +guarantee your freedom to share and change free software--to make sure the +software is free for all its users. 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You may copy and distribute the Program (or a work based on it, under +Section 2) in object code or executable form under the terms of Sections 1 and +2 above provided that you also do one of the following: + + a) Accompany it with the complete corresponding machine-readable source + code, which must be distributed under the terms of Sections 1 and 2 above + on a medium customarily used for software interchange; or, + + b) Accompany it with a written offer, valid for at least three years, to + give any third party, for a charge no more than your cost of physically + performing source distribution, a complete machine-readable copy of the + corresponding source code, to be distributed under the terms of Sections 1 + and 2 above on a medium customarily used for software interchange; or, + + c) Accompany it with the information you received as to the offer to + distribute corresponding source code. (This alternative is allowed only + for noncommercial distribution and only if you received the program in + object code or executable form with such an offer, in accord with + Subsection b above.) + +The source code for a work means the preferred form of the work for making +modifications to it. For an executable work, complete source code means all +the source code for all modules it contains, plus any associated interface +definition files, plus the scripts used to control compilation and installation +of the executable. However, as a special exception, the source code +distributed need not include anything that is normally distributed (in either +source or binary form) with the major components (compiler, kernel, and so on) +of the operating system on which the executable runs, unless that component +itself accompanies the executable. + +If distribution of executable or object code is made by offering access to copy +from a designated place, then offering equivalent access to copy the source +code from the same place counts as distribution of the source code, even though +third parties are not compelled to copy the source along with the object code. + +4. You may not copy, modify, sublicense, or distribute the Program except as +expressly provided under this License. Any attempt otherwise to copy, modify, +sublicense or distribute the Program is void, and will automatically terminate +your rights under this License. However, parties who have received copies, or +rights, from you under this License will not have their licenses terminated so +long as such parties remain in full compliance. + +5. You are not required to accept this License, since you have not signed it. +However, nothing else grants you permission to modify or distribute the Program +or its derivative works. These actions are prohibited by law if you do not +accept this License. Therefore, by modifying or distributing the Program (or +any work based on the Program), you indicate your acceptance of this License to +do so, and all its terms and conditions for copying, distributing or modifying +the Program or works based on it. + +6. Each time you redistribute the Program (or any work based on the Program), +the recipient automatically receives a license from the original licensor to +copy, distribute or modify the Program subject to these terms and conditions. +You may not impose any further restrictions on the recipients' exercise of the +rights granted herein. You are not responsible for enforcing compliance by +third parties to this License. + +7. If, as a consequence of a court judgment or allegation of patent +infringement or for any other reason (not limited to patent issues), conditions +are imposed on you (whether by court order, agreement or otherwise) that +contradict the conditions of this License, they do not excuse you from the +conditions of this License. If you cannot distribute so as to satisfy +simultaneously your obligations under this License and any other pertinent +obligations, then as a consequence you may not distribute the Program at all. +For example, if a patent license would not permit royalty-free redistribution +of the Program by all those who receive copies directly or indirectly through +you, then the only way you could satisfy both it and this License would be to +refrain entirely from distribution of the Program. + +If any portion of this section is held invalid or unenforceable under any +particular circumstance, the balance of the section is intended to apply and +the section as a whole is intended to apply in other circumstances. + +It is not the purpose of this section to induce you to infringe any patents or +other property right claims or to contest validity of any such claims; this +section has the sole purpose of protecting the integrity of the free software +distribution system, which is implemented by public license practices. Many +people have made generous contributions to the wide range of software +distributed through that system in reliance on consistent application of that +system; it is up to the author/donor to decide if he or she is willing to +distribute software through any other system and a licensee cannot impose that +choice. + +This section is intended to make thoroughly clear what is believed to be a +consequence of the rest of this License. + +8. If the distribution and/or use of the Program is restricted in certain +countries either by patents or by copyrighted interfaces, the original +copyright holder who places the Program under this License may add an explicit +geographical distribution limitation excluding those countries, so that +distribution is permitted only in or among countries not thus excluded. In +such case, this License incorporates the limitation as if written in the body +of this License. + +9. The Free Software Foundation may publish revised and/or new versions of the +General Public License from time to time. Such new versions will be similar in +spirit to the present version, but may differ in detail to address new problems +or concerns. + +Each version is given a distinguishing version number. If the Program +specifies a version number of this License which applies to it and "any later +version", you have the option of following the terms and conditions either of +that version or of any later version published by the Free Software Foundation. +If the Program does not specify a version number of this License, you may +choose any version ever published by the Free Software Foundation. + +10. If you wish to incorporate parts of the Program into other free programs +whose distribution conditions are different, write to the author to ask for +permission. For software which is copyrighted by the Free Software Foundation, +write to the Free Software Foundation; we sometimes make exceptions for this. +Our decision will be guided by the two goals of preserving the free status of +all derivatives of our free software and of promoting the sharing and reuse of +software generally. + +NO WARRANTY + +11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY FOR +THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN OTHERWISE +STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES PROVIDE THE +PROGRAM "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED, +INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND +FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND +PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, +YOU ASSUME THE COST OF ALL NECESSARY SERVICING, REPAIR OR CORRECTION. + +12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING WILL +ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MAY MODIFY AND/OR REDISTRIBUTE THE +PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY +GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE USE OR +INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF DATA OR DATA +BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD PARTIES OR A +FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS), EVEN IF SUCH HOLDER +OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES. + +END OF TERMS AND CONDITIONS + +How to Apply These Terms to Your New Programs + +If you develop a new program, and you want it to be of the greatest possible +use to the public, the best way to achieve this is to make it free software +which everyone can redistribute and change under these terms. + +To do so, attach the following notices to the program. It is safest to attach +them to the start of each source file to most effectively convey the exclusion +of warranty; and each file should have at least the "copyright" line and a +pointer to where the full notice is found. + + One line to give the program's name and a brief idea of what it does. + + Copyright (C) + + This program is free software; you can redistribute it and/or modify it + under the terms of the GNU General Public License as published by the Free + Software Foundation; either version 2 of the License, or (at your option) + any later version. + + This program is distributed in the hope that it will be useful, but WITHOUT + ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or + FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for + more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. + +Also add information on how to contact you by electronic and paper mail. + +If the program is interactive, make it output a short notice like this when it +starts in an interactive mode: + + Gnomovision version 69, Copyright (C) year name of author Gnomovision comes + with ABSOLUTELY NO WARRANTY; for details type 'show w'. This is free + software, and you are welcome to redistribute it under certain conditions; + type 'show c' for details. + +The hypothetical commands 'show w' and 'show c' should show the appropriate +parts of the General Public License. Of course, the commands you use may be +called something other than 'show w' and 'show c'; they could even be +mouse-clicks or menu items--whatever suits your program. + +You should also get your employer (if you work as a programmer) or your school, +if any, to sign a "copyright disclaimer" for the program, if necessary. Here +is a sample; alter the names: + + Yoyodyne, Inc., hereby disclaims all copyright interest in the program + 'Gnomovision' (which makes passes at compilers) written by James Hacker. + + signature of Ty Coon, 1 April 1989 + + Ty Coon, President of Vice + +This General Public License does not permit incorporating your program into +proprietary programs. If your program is a subroutine library, you may +consider it more useful to permit linking proprietary applications with the +library. If this is what you want to do, use the GNU Library General Public +License instead of this License. + + +"CLASSPATH" EXCEPTION TO THE GPL + +Certain source files distributed by Oracle America and/or its affiliates are +subject to the following clarification and special exception to the GPL, but +only where Oracle has expressly included in the particular source file's header +the words "Oracle designates this particular file as subject to the "Classpath" +exception as provided by Oracle in the LICENSE file that accompanied this code." + + Linking this library statically or dynamically with other modules is making + a combined work based on this library. Thus, the terms and conditions of + the GNU General Public License cover the whole combination. + + As a special exception, the copyright holders of this library give you + permission to link this library with independent modules to produce an + executable, regardless of the license terms of these independent modules, + and to copy and distribute the resulting executable under terms of your + choice, provided that you also meet, for each linked independent module, + the terms and conditions of the license of that module. An independent + module is a module which is not derived from or based on this library. If + you modify this library, you may extend this exception to your version of + the library, but you are not obligated to do so. If you do not wish to do + so, delete this exception statement from your version. diff --git a/jalview_java/legal/java.base/aes.md b/jalview_java/legal/java.base/aes.md new file mode 100644 index 0000000..6d0ee2e --- /dev/null +++ b/jalview_java/legal/java.base/aes.md @@ -0,0 +1,36 @@ +## Cryptix AES v3.2.0 + +### Cryptix General License +
+
+Cryptix General License
+
+Copyright (c) 1995-2005 The Cryptix Foundation Limited.
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are
+met:
+
+  1. Redistributions of source code must retain the copyright notice,
+     this list of conditions and the following disclaimer.
+
+  2. Redistributions in binary form must reproduce the above copyright
+     notice, this list of conditions and the following disclaimer in
+     the documentation and/or other materials provided with the
+     distribution.
+
+THIS SOFTWARE IS PROVIDED BY THE CRYPTIX FOUNDATION LIMITED AND
+CONTRIBUTORS ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES,
+INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
+MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
+IN NO EVENT SHALL THE CRYPTIX FOUNDATION LIMITED OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR
+BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
+WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
+OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN
+IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+
diff --git a/jalview_java/legal/java.base/asm.md b/jalview_java/legal/java.base/asm.md new file mode 100644 index 0000000..351e45a --- /dev/null +++ b/jalview_java/legal/java.base/asm.md @@ -0,0 +1,36 @@ +## ASM Bytecode Manipulation Framework v6.0 + +### ASM License +
+
+Copyright (c) 2000-2011 France Télécom
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions
+are met:
+
+1. Redistributions of source code must retain the above copyright
+   notice, this list of conditions and the following disclaimer.
+
+2. Redistributions in binary form must reproduce the above copyright
+   notice, this list of conditions and the following disclaimer in the
+   documentation and/or other materials provided with the distribution.
+
+3. Neither the name of the copyright holders nor the names of its
+   contributors may be used to endorse or promote products derived from
+   this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
+LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF
+THE POSSIBILITY OF SUCH DAMAGE.
+
+
diff --git a/jalview_java/legal/java.base/c-libutl.md b/jalview_java/legal/java.base/c-libutl.md new file mode 100644 index 0000000..8bc9880 --- /dev/null +++ b/jalview_java/legal/java.base/c-libutl.md @@ -0,0 +1,35 @@ +## c-libutl 20160225 + +### c-libutl License +``` + +This software is distributed under the terms of the BSD license. + +== BSD LICENSE =============================================================== + + (C) 2009 by Remo Dentato (rdentato@gmail.com) + + +Redistribution and use in source and binary forms, with or without modification, +are permitted provided that the following conditions are met: + + * Redistributions of source code must retain the above copyright notice, + this list of conditions and the following disclaimer. + * Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND +ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED +WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR +ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES +(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; +LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND +ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT +(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS +SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + +http://opensource.org/licenses/bsd-license.php + +``` diff --git a/jalview_java/legal/java.base/cldr.md b/jalview_java/legal/java.base/cldr.md new file mode 100644 index 0000000..f6141ee --- /dev/null +++ b/jalview_java/legal/java.base/cldr.md @@ -0,0 +1,66 @@ +## Unicode Common Local Data Repository (CLDR) v33 + +### CLDR License + +``` + +UNICODE, INC. LICENSE AGREEMENT - DATA FILES AND SOFTWARE +Unicode Data Files include all data files under the directories +http://www.unicode.org/Public/, http://www.unicode.org/reports/, +http://www.unicode.org/cldr/data/, +http://source.icu-project.org/repos/icu/, and +http://www.unicode.org/utility/trac/browser/. + +Unicode Data Files do not include PDF online code charts under the +directory http://www.unicode.org/Public/. + +Software includes any source code published in the Unicode Standard +or under the directories +http://www.unicode.org/Public/, http://www.unicode.org/reports/, +http://www.unicode.org/cldr/data/, +http://source.icu-project.org/repos/icu/, and +http://www.unicode.org/utility/trac/browser/. + +NOTICE TO USER: Carefully read the following legal agreement. +BY DOWNLOADING, INSTALLING, COPYING OR OTHERWISE USING UNICODE INC.'S +DATA FILES ("DATA FILES"), AND/OR SOFTWARE ("SOFTWARE"), +YOU UNEQUIVOCALLY ACCEPT, AND AGREE TO BE BOUND BY, ALL OF THE +TERMS AND CONDITIONS OF THIS AGREEMENT. +IF YOU DO NOT AGREE, DO NOT DOWNLOAD, INSTALL, COPY, DISTRIBUTE OR USE +THE DATA FILES OR SOFTWARE. + +COPYRIGHT AND PERMISSION NOTICE + +Copyright © 1991-2018 Unicode, Inc. All rights reserved. +Distributed under the Terms of Use in http://www.unicode.org/copyright.html. + +Permission is hereby granted, free of charge, to any person obtaining +a copy of the Unicode data files and any associated documentation +(the "Data Files") or Unicode software and any associated documentation +(the "Software") to deal in the Data Files or Software +without restriction, including without limitation the rights to use, +copy, modify, merge, publish, distribute, and/or sell copies of +the Data Files or Software, and to permit persons to whom the Data Files +or Software are furnished to do so, provided that either +(a) this copyright and permission notice appear with all copies +of the Data Files or Software, or +(b) this copyright and permission notice appear in associated +Documentation. + +THE DATA FILES AND SOFTWARE ARE PROVIDED "AS IS", WITHOUT WARRANTY OF +ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE +WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND +NONINFRINGEMENT OF THIRD PARTY RIGHTS. +IN NO EVENT SHALL THE COPYRIGHT HOLDER OR HOLDERS INCLUDED IN THIS +NOTICE BE LIABLE FOR ANY CLAIM, OR ANY SPECIAL INDIRECT OR CONSEQUENTIAL +DAMAGES, OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, +DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER +TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR +PERFORMANCE OF THE DATA FILES OR SOFTWARE. + +Except as contained in this notice, the name of a copyright holder +shall not be used in advertising or otherwise to promote the sale, +use or other dealings in these Data Files or Software without prior +written authorization of the copyright holder. + +``` diff --git a/jalview_java/legal/java.base/icu.md b/jalview_java/legal/java.base/icu.md new file mode 100644 index 0000000..9bf02a6 --- /dev/null +++ b/jalview_java/legal/java.base/icu.md @@ -0,0 +1,66 @@ +## International Components for Unicode (ICU4J) v60.2 + +### ICU4J License + +``` + +UNICODE, INC. LICENSE AGREEMENT - DATA FILES AND SOFTWARE +Unicode Data Files include all data files under the directories +http://www.unicode.org/Public/, http://www.unicode.org/reports/, +http://www.unicode.org/cldr/data/, +http://source.icu-project.org/repos/icu/, and +http://www.unicode.org/utility/trac/browser/. + +Unicode Data Files do not include PDF online code charts under the +directory http://www.unicode.org/Public/. + +Software includes any source code published in the Unicode Standard +or under the directories +http://www.unicode.org/Public/, http://www.unicode.org/reports/, +http://www.unicode.org/cldr/data/, +http://source.icu-project.org/repos/icu/, and +http://www.unicode.org/utility/trac/browser/. + +NOTICE TO USER: Carefully read the following legal agreement. +BY DOWNLOADING, INSTALLING, COPYING OR OTHERWISE USING UNICODE INC.'S +DATA FILES ("DATA FILES"), AND/OR SOFTWARE ("SOFTWARE"), +YOU UNEQUIVOCALLY ACCEPT, AND AGREE TO BE BOUND BY, ALL OF THE +TERMS AND CONDITIONS OF THIS AGREEMENT. +IF YOU DO NOT AGREE, DO NOT DOWNLOAD, INSTALL, COPY, DISTRIBUTE OR USE +THE DATA FILES OR SOFTWARE. + +COPYRIGHT AND PERMISSION NOTICE + +Copyright © 1991-2018 Unicode, Inc. All rights reserved. +Distributed under the Terms of Use in http://www.unicode.org/copyright.html. + +Permission is hereby granted, free of charge, to any person obtaining +a copy of the Unicode data files and any associated documentation +(the "Data Files") or Unicode software and any associated documentation +(the "Software") to deal in the Data Files or Software +without restriction, including without limitation the rights to use, +copy, modify, merge, publish, distribute, and/or sell copies of +the Data Files or Software, and to permit persons to whom the Data Files +or Software are furnished to do so, provided that either +(a) this copyright and permission notice appear with all copies +of the Data Files or Software, or +(b) this copyright and permission notice appear in associated +Documentation. + +THE DATA FILES AND SOFTWARE ARE PROVIDED "AS IS", WITHOUT WARRANTY OF +ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE +WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND +NONINFRINGEMENT OF THIRD PARTY RIGHTS. +IN NO EVENT SHALL THE COPYRIGHT HOLDER OR HOLDERS INCLUDED IN THIS +NOTICE BE LIABLE FOR ANY CLAIM, OR ANY SPECIAL INDIRECT OR CONSEQUENTIAL +DAMAGES, OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, +DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER +TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR +PERFORMANCE OF THE DATA FILES OR SOFTWARE. + +Except as contained in this notice, the name of a copyright holder +shall not be used in advertising or otherwise to promote the sale, +use or other dealings in these Data Files or Software without prior +written authorization of the copyright holder. + +``` diff --git a/jalview_java/legal/java.base/public_suffix.md b/jalview_java/legal/java.base/public_suffix.md new file mode 100644 index 0000000..5f7cd5a --- /dev/null +++ b/jalview_java/legal/java.base/public_suffix.md @@ -0,0 +1,399 @@ +## Mozilla Public Suffix List + +### Public Suffix Notice +``` +You are receiving a copy of the Mozilla Public Suffix List in the following +file: /lib/security/public_suffix_list.dat. The terms of the +Oracle license do NOT apply to this file; it is licensed under the +Mozilla Public License 2.0, separately from the Oracle programs you receive. +If you do not wish to use the Public Suffix List, you may remove the +/lib/security/public_suffix_list.dat file. + +The Source Code of this file is available under the +Mozilla Public License, v. 2.0 and is located at +https://raw.githubusercontent.com/publicsuffix/list/2225db8d9f4a2a27ec697c883360632fa0c16261/public_suffix_list.dat. +If a copy of the MPL was not distributed with this file, you can obtain one +at https://mozilla.org/MPL/2.0/. + +Software distributed under the License is distributed on an "AS IS" basis, +WITHOUT WARRANTY OF ANY KIND, either express or implied. See the License +for the specific language governing rights and limitations under the License. +``` + +### MPL v2.0 +``` +Mozilla Public License Version 2.0 +================================== + +1. Definitions +-------------- + +1.1. "Contributor" + means each individual or legal entity that creates, contributes to + the creation of, or owns Covered Software. + +1.2. "Contributor Version" + means the combination of the Contributions of others (if any) used + by a Contributor and that particular Contributor's Contribution. + +1.3. "Contribution" + means Covered Software of a particular Contributor. + +1.4. "Covered Software" + means Source Code Form to which the initial Contributor has attached + the notice in Exhibit A, the Executable Form of such Source Code + Form, and Modifications of such Source Code Form, in each case + including portions thereof. + +1.5. "Incompatible With Secondary Licenses" + means + + (a) that the initial Contributor has attached the notice described + in Exhibit B to the Covered Software; or + + (b) that the Covered Software was made available under the terms of + version 1.1 or earlier of the License, but not also under the + terms of a Secondary License. + +1.6. "Executable Form" + means any form of the work other than Source Code Form. + +1.7. "Larger Work" + means a work that combines Covered Software with other material, in + a separate file or files, that is not Covered Software. + +1.8. "License" + means this document. + +1.9. "Licensable" + means having the right to grant, to the maximum extent possible, + whether at the time of the initial grant or subsequently, any and + all of the rights conveyed by this License. + +1.10. "Modifications" + means any of the following: + + (a) any file in Source Code Form that results from an addition to, + deletion from, or modification of the contents of Covered + Software; or + + (b) any new file in Source Code Form that contains any Covered + Software. + +1.11. "Patent Claims" of a Contributor + means any patent claim(s), including without limitation, method, + process, and apparatus claims, in any patent Licensable by such + Contributor that would be infringed, but for the grant of the + License, by the making, using, selling, offering for sale, having + made, import, or transfer of either its Contributions or its + Contributor Version. + +1.12. "Secondary License" + means either the GNU General Public License, Version 2.0, the GNU + Lesser General Public License, Version 2.1, the GNU Affero General + Public License, Version 3.0, or any later versions of those + licenses. + +1.13. "Source Code Form" + means the form of the work preferred for making modifications. + +1.14. "You" (or "Your") + means an individual or a legal entity exercising rights under this + License. For legal entities, "You" includes any entity that + controls, is controlled by, or is under common control with You. For + purposes of this definition, "control" means (a) the power, direct + or indirect, to cause the direction or management of such entity, + whether by contract or otherwise, or (b) ownership of more than + fifty percent (50%) of the outstanding shares or beneficial + ownership of such entity. + +2. License Grants and Conditions +-------------------------------- + +2.1. Grants + +Each Contributor hereby grants You a world-wide, royalty-free, +non-exclusive license: + +(a) under intellectual property rights (other than patent or trademark) + Licensable by such Contributor to use, reproduce, make available, + modify, display, perform, distribute, and otherwise exploit its + Contributions, either on an unmodified basis, with Modifications, or + as part of a Larger Work; and + +(b) under Patent Claims of such Contributor to make, use, sell, offer + for sale, have made, import, and otherwise transfer either its + Contributions or its Contributor Version. + +2.2. Effective Date + +The licenses granted in Section 2.1 with respect to any Contribution +become effective for each Contribution on the date the Contributor first +distributes such Contribution. + +2.3. Limitations on Grant Scope + +The licenses granted in this Section 2 are the only rights granted under +this License. No additional rights or licenses will be implied from the +distribution or licensing of Covered Software under this License. +Notwithstanding Section 2.1(b) above, no patent license is granted by a +Contributor: + +(a) for any code that a Contributor has removed from Covered Software; + or + +(b) for infringements caused by: (i) Your and any other third party's + modifications of Covered Software, or (ii) the combination of its + Contributions with other software (except as part of its Contributor + Version); or + +(c) under Patent Claims infringed by Covered Software in the absence of + its Contributions. + +This License does not grant any rights in the trademarks, service marks, +or logos of any Contributor (except as may be necessary to comply with +the notice requirements in Section 3.4). + +2.4. Subsequent Licenses + +No Contributor makes additional grants as a result of Your choice to +distribute the Covered Software under a subsequent version of this +License (see Section 10.2) or under the terms of a Secondary License (if +permitted under the terms of Section 3.3). + +2.5. Representation + +Each Contributor represents that the Contributor believes its +Contributions are its original creation(s) or it has sufficient rights +to grant the rights to its Contributions conveyed by this License. + +2.6. Fair Use + +This License is not intended to limit any rights You have under +applicable copyright doctrines of fair use, fair dealing, or other +equivalents. + +2.7. Conditions + +Sections 3.1, 3.2, 3.3, and 3.4 are conditions of the licenses granted +in Section 2.1. + +3. Responsibilities +------------------- + +3.1. Distribution of Source Form + +All distribution of Covered Software in Source Code Form, including any +Modifications that You create or to which You contribute, must be under +the terms of this License. You must inform recipients that the Source +Code Form of the Covered Software is governed by the terms of this +License, and how they can obtain a copy of this License. You may not +attempt to alter or restrict the recipients' rights in the Source Code +Form. + +3.2. Distribution of Executable Form + +If You distribute Covered Software in Executable Form then: + +(a) such Covered Software must also be made available in Source Code + Form, as described in Section 3.1, and You must inform recipients of + the Executable Form how they can obtain a copy of such Source Code + Form by reasonable means in a timely manner, at a charge no more + than the cost of distribution to the recipient; and + +(b) You may distribute such Executable Form under the terms of this + License, or sublicense it under different terms, provided that the + license for the Executable Form does not attempt to limit or alter + the recipients' rights in the Source Code Form under this License. + +3.3. Distribution of a Larger Work + +You may create and distribute a Larger Work under terms of Your choice, +provided that You also comply with the requirements of this License for +the Covered Software. If the Larger Work is a combination of Covered +Software with a work governed by one or more Secondary Licenses, and the +Covered Software is not Incompatible With Secondary Licenses, this +License permits You to additionally distribute such Covered Software +under the terms of such Secondary License(s), so that the recipient of +the Larger Work may, at their option, further distribute the Covered +Software under the terms of either this License or such Secondary +License(s). + +3.4. Notices + +You may not remove or alter the substance of any license notices +(including copyright notices, patent notices, disclaimers of warranty, +or limitations of liability) contained within the Source Code Form of +the Covered Software, except that You may alter any license notices to +the extent required to remedy known factual inaccuracies. + +3.5. Application of Additional Terms + +You may choose to offer, and to charge a fee for, warranty, support, +indemnity or liability obligations to one or more recipients of Covered +Software. However, You may do so only on Your own behalf, and not on +behalf of any Contributor. You must make it absolutely clear that any +such warranty, support, indemnity, or liability obligation is offered by +You alone, and You hereby agree to indemnify every Contributor for any +liability incurred by such Contributor as a result of warranty, support, +indemnity or liability terms You offer. You may include additional +disclaimers of warranty and limitations of liability specific to any +jurisdiction. + +4. Inability to Comply Due to Statute or Regulation +--------------------------------------------------- + +If it is impossible for You to comply with any of the terms of this +License with respect to some or all of the Covered Software due to +statute, judicial order, or regulation then You must: (a) comply with +the terms of this License to the maximum extent possible; and (b) +describe the limitations and the code they affect. Such description must +be placed in a text file included with all distributions of the Covered +Software under this License. Except to the extent prohibited by statute +or regulation, such description must be sufficiently detailed for a +recipient of ordinary skill to be able to understand it. + +5. Termination +-------------- + +5.1. The rights granted under this License will terminate automatically +if You fail to comply with any of its terms. However, if You become +compliant, then the rights granted under this License from a particular +Contributor are reinstated (a) provisionally, unless and until such +Contributor explicitly and finally terminates Your grants, and (b) on an +ongoing basis, if such Contributor fails to notify You of the +non-compliance by some reasonable means prior to 60 days after You have +come back into compliance. Moreover, Your grants from a particular +Contributor are reinstated on an ongoing basis if such Contributor +notifies You of the non-compliance by some reasonable means, this is the +first time You have received notice of non-compliance with this License +from such Contributor, and You become compliant prior to 30 days after +Your receipt of the notice. + +5.2. If You initiate litigation against any entity by asserting a patent +infringement claim (excluding declaratory judgment actions, +counter-claims, and cross-claims) alleging that a Contributor Version +directly or indirectly infringes any patent, then the rights granted to +You by any and all Contributors for the Covered Software under Section +2.1 of this License shall terminate. + +5.3. In the event of termination under Sections 5.1 or 5.2 above, all +end user license agreements (excluding distributors and resellers) which +have been validly granted by You or Your distributors under this License +prior to termination shall survive termination. + +************************************************************************ +* * +* 6. Disclaimer of Warranty * +* ------------------------- * +* * +* Covered Software is provided under this License on an "as is" * +* basis, without warranty of any kind, either expressed, implied, or * +* statutory, including, without limitation, warranties that the * +* Covered Software is free of defects, merchantable, fit for a * +* particular purpose or non-infringing. The entire risk as to the * +* quality and performance of the Covered Software is with You. * +* Should any Covered Software prove defective in any respect, You * +* (not any Contributor) assume the cost of any necessary servicing, * +* repair, or correction. This disclaimer of warranty constitutes an * +* essential part of this License. No use of any Covered Software is * +* authorized under this License except under this disclaimer. * +* * +************************************************************************ + +************************************************************************ +* * +* 7. Limitation of Liability * +* -------------------------- * +* * +* Under no circumstances and under no legal theory, whether tort * +* (including negligence), contract, or otherwise, shall any * +* Contributor, or anyone who distributes Covered Software as * +* permitted above, be liable to You for any direct, indirect, * +* special, incidental, or consequential damages of any character * +* including, without limitation, damages for lost profits, loss of * +* goodwill, work stoppage, computer failure or malfunction, or any * +* and all other commercial damages or losses, even if such party * +* shall have been informed of the possibility of such damages. This * +* limitation of liability shall not apply to liability for death or * +* personal injury resulting from such party's negligence to the * +* extent applicable law prohibits such limitation. Some * +* jurisdictions do not allow the exclusion or limitation of * +* incidental or consequential damages, so this exclusion and * +* limitation may not apply to You. * +* * +************************************************************************ + +8. Litigation +------------- + +Any litigation relating to this License may be brought only in the +courts of a jurisdiction where the defendant maintains its principal +place of business and such litigation shall be governed by laws of that +jurisdiction, without reference to its conflict-of-law provisions. +Nothing in this Section shall prevent a party's ability to bring +cross-claims or counter-claims. + +9. Miscellaneous +---------------- + +This License represents the complete agreement concerning the subject +matter hereof. If any provision of this License is held to be +unenforceable, such provision shall be reformed only to the extent +necessary to make it enforceable. Any law or regulation which provides +that the language of a contract shall be construed against the drafter +shall not be used to construe this License against a Contributor. + +10. Versions of the License +--------------------------- + +10.1. New Versions + +Mozilla Foundation is the license steward. Except as provided in Section +10.3, no one other than the license steward has the right to modify or +publish new versions of this License. Each version will be given a +distinguishing version number. + +10.2. Effect of New Versions + +You may distribute the Covered Software under the terms of the version +of the License under which You originally received the Covered Software, +or under the terms of any subsequent version published by the license +steward. + +10.3. Modified Versions + +If you create software not governed by this License, and you want to +create a new license for such software, you may create and use a +modified version of this License if you rename the license and remove +any references to the name of the license steward (except to note that +such modified license differs from this License). + +10.4. Distributing Source Code Form that is Incompatible With Secondary +Licenses + +If You choose to distribute Source Code Form that is Incompatible With +Secondary Licenses under the terms of this version of the License, the +notice described in Exhibit B of this License must be attached. + +Exhibit A - Source Code Form License Notice +------------------------------------------- + + This Source Code Form is subject to the terms of the Mozilla Public + License, v. 2.0. If a copy of the MPL was not distributed with this + file, You can obtain one at https://mozilla.org/MPL/2.0/. + +If it is not possible or desirable to put the notice in a particular +file, then You may include the notice in a location (such as a LICENSE +file in a relevant directory) where a recipient would be likely to look +for such a notice. + +You may add additional accurate notices of copyright ownership. + +Exhibit B - "Incompatible With Secondary Licenses" Notice +--------------------------------------------------------- + + This Source Code Form is "Incompatible With Secondary Licenses", as + defined by the Mozilla Public License, v. 2.0. + +``` diff --git a/jalview_java/legal/java.base/unicode.md b/jalview_java/legal/java.base/unicode.md new file mode 100644 index 0000000..87ee4fa --- /dev/null +++ b/jalview_java/legal/java.base/unicode.md @@ -0,0 +1,66 @@ +## The Unicode Standard, Unicode Character Database, Version 10.0.0 + +### Unicode Character Database + +``` + +UNICODE, INC. LICENSE AGREEMENT - DATA FILES AND SOFTWARE +Unicode Data Files include all data files under the directories +http://www.unicode.org/Public/, http://www.unicode.org/reports/, +http://www.unicode.org/cldr/data/, +http://source.icu-project.org/repos/icu/, and +http://www.unicode.org/utility/trac/browser/. + +Unicode Data Files do not include PDF online code charts under the +directory http://www.unicode.org/Public/. + +Software includes any source code published in the Unicode Standard +or under the directories +http://www.unicode.org/Public/, http://www.unicode.org/reports/, +http://www.unicode.org/cldr/data/, +http://source.icu-project.org/repos/icu/, and +http://www.unicode.org/utility/trac/browser/. + +NOTICE TO USER: Carefully read the following legal agreement. +BY DOWNLOADING, INSTALLING, COPYING OR OTHERWISE USING UNICODE INC.'S +DATA FILES ("DATA FILES"), AND/OR SOFTWARE ("SOFTWARE"), +YOU UNEQUIVOCALLY ACCEPT, AND AGREE TO BE BOUND BY, ALL OF THE +TERMS AND CONDITIONS OF THIS AGREEMENT. +IF YOU DO NOT AGREE, DO NOT DOWNLOAD, INSTALL, COPY, DISTRIBUTE OR USE +THE DATA FILES OR SOFTWARE. + +COPYRIGHT AND PERMISSION NOTICE + +Copyright © 1991-2018 Unicode, Inc. All rights reserved. +Distributed under the Terms of Use in http://www.unicode.org/copyright.html. + +Permission is hereby granted, free of charge, to any person obtaining +a copy of the Unicode data files and any associated documentation +(the "Data Files") or Unicode software and any associated documentation +(the "Software") to deal in the Data Files or Software +without restriction, including without limitation the rights to use, +copy, modify, merge, publish, distribute, and/or sell copies of +the Data Files or Software, and to permit persons to whom the Data Files +or Software are furnished to do so, provided that either +(a) this copyright and permission notice appear with all copies +of the Data Files or Software, or +(b) this copyright and permission notice appear in associated +Documentation. + +THE DATA FILES AND SOFTWARE ARE PROVIDED "AS IS", WITHOUT WARRANTY OF +ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE +WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND +NONINFRINGEMENT OF THIRD PARTY RIGHTS. +IN NO EVENT SHALL THE COPYRIGHT HOLDER OR HOLDERS INCLUDED IN THIS +NOTICE BE LIABLE FOR ANY CLAIM, OR ANY SPECIAL INDIRECT OR CONSEQUENTIAL +DAMAGES, OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, +DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER +TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR +PERFORMANCE OF THE DATA FILES OR SOFTWARE. + +Except as contained in this notice, the name of a copyright holder +shall not be used in advertising or otherwise to promote the sale, +use or other dealings in these Data Files or Software without prior +written authorization of the copyright holder. + +``` diff --git a/jalview_java/legal/java.datatransfer/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/java.datatransfer/ADDITIONAL_LICENSE_INFO new file mode 120000 index 0000000..76b7b2f --- /dev/null +++ b/jalview_java/legal/java.datatransfer/ADDITIONAL_LICENSE_INFO @@ -0,0 +1 @@ +../java.base/ADDITIONAL_LICENSE_INFO \ No newline at end of file diff --git a/jalview_java/legal/java.datatransfer/ASSEMBLY_EXCEPTION b/jalview_java/legal/java.datatransfer/ASSEMBLY_EXCEPTION new file mode 120000 index 0000000..bd8da86 --- /dev/null +++ b/jalview_java/legal/java.datatransfer/ASSEMBLY_EXCEPTION @@ -0,0 +1 @@ +../java.base/ASSEMBLY_EXCEPTION \ No newline at end of file diff --git a/jalview_java/legal/java.datatransfer/LICENSE b/jalview_java/legal/java.datatransfer/LICENSE new file mode 120000 index 0000000..902705b --- /dev/null +++ b/jalview_java/legal/java.datatransfer/LICENSE @@ -0,0 +1 @@ +../java.base/LICENSE \ No newline at end of file diff --git a/jalview_java/legal/java.desktop/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/java.desktop/ADDITIONAL_LICENSE_INFO new file mode 120000 index 0000000..76b7b2f --- /dev/null +++ b/jalview_java/legal/java.desktop/ADDITIONAL_LICENSE_INFO @@ -0,0 +1 @@ +../java.base/ADDITIONAL_LICENSE_INFO \ No newline at end of file diff --git a/jalview_java/legal/java.desktop/ASSEMBLY_EXCEPTION b/jalview_java/legal/java.desktop/ASSEMBLY_EXCEPTION new file mode 120000 index 0000000..bd8da86 --- /dev/null +++ b/jalview_java/legal/java.desktop/ASSEMBLY_EXCEPTION @@ -0,0 +1 @@ +../java.base/ASSEMBLY_EXCEPTION \ No newline at end of file diff --git a/jalview_java/legal/java.desktop/LICENSE b/jalview_java/legal/java.desktop/LICENSE new file mode 120000 index 0000000..902705b --- /dev/null +++ b/jalview_java/legal/java.desktop/LICENSE @@ -0,0 +1 @@ +../java.base/LICENSE \ No newline at end of file diff --git a/jalview_java/legal/java.desktop/colorimaging.md b/jalview_java/legal/java.desktop/colorimaging.md new file mode 100644 index 0000000..eeb9932 --- /dev/null +++ b/jalview_java/legal/java.desktop/colorimaging.md @@ -0,0 +1,7 @@ +## Eastman Kodak Company: Portions of color management and imaging software + +### Eastman Kodak Notice +
+Portions Copyright Eastman Kodak Company 1991-2003
+
+ diff --git a/jalview_java/legal/java.desktop/freetype.md b/jalview_java/legal/java.desktop/freetype.md new file mode 100644 index 0000000..d943e08 --- /dev/null +++ b/jalview_java/legal/java.desktop/freetype.md @@ -0,0 +1,537 @@ +## The FreeType Project: Freetype v2.9.1 + + +### FreeType Notice + +``` +FreeType comes with two licenses from which you can choose the one +which fits your needs best. + + The FreeType License (FTL) is the most commonly used one. It is + a BSD-style license with a credit clause and thus compatible with + the GNU Public License (GPL) version 3, but not with the + GPL version 2. + + The GNU General Public License (GPL), version 2. Use it for all + projects which use the GPLv2 also, or which need a license + compatible to the GPLv2. + +``` + +### FreeType License +``` + The FreeType Project LICENSE + ---------------------------- + + 2006-Jan-27 + + Copyright 1996-2002, 2006 by + David Turner, Robert Wilhelm, and Werner Lemberg + + + +Introduction +============ + + The FreeType Project is distributed in several archive packages; + some of them may contain, in addition to the FreeType font engine, + various tools and contributions which rely on, or relate to, the + FreeType Project. + + This license applies to all files found in such packages, and + which do not fall under their own explicit license. The license + affects thus the FreeType font engine, the test programs, + documentation and makefiles, at the very least. + + This license was inspired by the BSD, Artistic, and IJG + (Independent JPEG Group) licenses, which all encourage inclusion + and use of free software in commercial and freeware products + alike. As a consequence, its main points are that: + + o We don't promise that this software works. However, we will be + interested in any kind of bug reports. (`as is' distribution) + + o You can use this software for whatever you want, in parts or + full form, without having to pay us. (`royalty-free' usage) + + o You may not pretend that you wrote this software. If you use + it, or only parts of it, in a program, you must acknowledge + somewhere in your documentation that you have used the + FreeType code. (`credits') + + We specifically permit and encourage the inclusion of this + software, with or without modifications, in commercial products. + We disclaim all warranties covering The FreeType Project and + assume no liability related to The FreeType Project. + + + Finally, many people asked us for a preferred form for a + credit/disclaimer to use in compliance with this license. We thus + encourage you to use the following text: + + """ + Portions of this software are copyright © The FreeType + Project (www.freetype.org). All rights reserved. + """ + + Please replace with the value from the FreeType version you + actually use. + + +Legal Terms +=========== + +0. Definitions +-------------- + + Throughout this license, the terms `package', `FreeType Project', + and `FreeType archive' refer to the set of files originally + distributed by the authors (David Turner, Robert Wilhelm, and + Werner Lemberg) as the `FreeType Project', be they named as alpha, + beta or final release. + + `You' refers to the licensee, or person using the project, where + `using' is a generic term including compiling the project's source + code as well as linking it to form a `program' or `executable'. + This program is referred to as `a program using the FreeType + engine'. + + This license applies to all files distributed in the original + FreeType Project, including all source code, binaries and + documentation, unless otherwise stated in the file in its + original, unmodified form as distributed in the original archive. + If you are unsure whether or not a particular file is covered by + this license, you must contact us to verify this. + + The FreeType Project is copyright (C) 1996-2000 by David Turner, + Robert Wilhelm, and Werner Lemberg. All rights reserved except as + specified below. + +1. No Warranty +-------------- + + THE FREETYPE PROJECT IS PROVIDED `AS IS' WITHOUT WARRANTY OF ANY + KIND, EITHER EXPRESS OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, + WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR + PURPOSE. IN NO EVENT WILL ANY OF THE AUTHORS OR COPYRIGHT HOLDERS + BE LIABLE FOR ANY DAMAGES CAUSED BY THE USE OR THE INABILITY TO + USE, OF THE FREETYPE PROJECT. + +2. Redistribution +----------------- + + This license grants a worldwide, royalty-free, perpetual and + irrevocable right and license to use, execute, perform, compile, + display, copy, create derivative works of, distribute and + sublicense the FreeType Project (in both source and object code + forms) and derivative works thereof for any purpose; and to + authorize others to exercise some or all of the rights granted + herein, subject to the following conditions: + + o Redistribution of source code must retain this license file + (`FTL.TXT') unaltered; any additions, deletions or changes to + the original files must be clearly indicated in accompanying + documentation. The copyright notices of the unaltered, + original files must be preserved in all copies of source + files. + + o Redistribution in binary form must provide a disclaimer that + states that the software is based in part of the work of the + FreeType Team, in the distribution documentation. We also + encourage you to put an URL to the FreeType web page in your + documentation, though this isn't mandatory. + + These conditions apply to any software derived from or based on + the FreeType Project, not just the unmodified files. If you use + our work, you must acknowledge us. However, no fee need be paid + to us. + +3. Advertising +-------------- + + Neither the FreeType authors and contributors nor you shall use + the name of the other for commercial, advertising, or promotional + purposes without specific prior written permission. + + We suggest, but do not require, that you use one or more of the + following phrases to refer to this software in your documentation + or advertising materials: `FreeType Project', `FreeType Engine', + `FreeType library', or `FreeType Distribution'. + + As you have not signed this license, you are not required to + accept it. However, as the FreeType Project is copyrighted + material, only this license, or another one contracted with the + authors, grants you the right to use, distribute, and modify it. + Therefore, by using, distributing, or modifying the FreeType + Project, you indicate that you understand and accept all the terms + of this license. + +4. Contacts +----------- + + There are two mailing lists related to FreeType: + + o freetype@nongnu.org + + Discusses general use and applications of FreeType, as well as + future and wanted additions to the library and distribution. + If you are looking for support, start in this list if you + haven't found anything to help you in the documentation. + + o freetype-devel@nongnu.org + + Discusses bugs, as well as engine internals, design issues, + specific licenses, porting, etc. + + Our home page can be found at + + http://www.freetype.org + +``` + +### GPL v2 + +``` + GNU GENERAL PUBLIC LICENSE + Version 2, June 1991 + + Copyright (C) 1989, 1991 Free Software Foundation, Inc. + 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA + Everyone is permitted to copy and distribute verbatim copies + of this license document, but changing it is not allowed. + + Preamble + + The licenses for most software are designed to take away your +freedom to share and change it. By contrast, the GNU General Public +License is intended to guarantee your freedom to share and change free +software--to make sure the software is free for all its users. This +General Public License applies to most of the Free Software +Foundation's software and to any other program whose authors commit to +using it. (Some other Free Software Foundation software is covered by +the GNU Library General Public License instead.) You can apply it to +your programs, too. + + When we speak of free software, we are referring to freedom, not +price. Our General Public Licenses are designed to make sure that you +have the freedom to distribute copies of free software (and charge for +this service if you wish), that you receive source code or can get it +if you want it, that you can change the software or use pieces of it +in new free programs; and that you know you can do these things. + + To protect your rights, we need to make restrictions that forbid +anyone to deny you these rights or to ask you to surrender the rights. +These restrictions translate to certain responsibilities for you if you +distribute copies of the software, or if you modify it. + + For example, if you distribute copies of such a program, whether +gratis or for a fee, you must give the recipients all the rights that +you have. You must make sure that they, too, receive or can get the +source code. And you must show them these terms so they know their +rights. + + We protect your rights with two steps: (1) copyright the software, and +(2) offer you this license which gives you legal permission to copy, +distribute and/or modify the software. + + Also, for each author's protection and ours, we want to make certain +that everyone understands that there is no warranty for this free +software. If the software is modified by someone else and passed on, we +want its recipients to know that what they have is not the original, so +that any problems introduced by others will not reflect on the original +authors' reputations. + + Finally, any free program is threatened constantly by software +patents. We wish to avoid the danger that redistributors of a free +program will individually obtain patent licenses, in effect making the +program proprietary. To prevent this, we have made it clear that any +patent must be licensed for everyone's free use or not licensed at all. + + The precise terms and conditions for copying, distribution and +modification follow. + + GNU GENERAL PUBLIC LICENSE + TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION + + 0. This License applies to any program or other work which contains +a notice placed by the copyright holder saying it may be distributed +under the terms of this General Public License. The "Program", below, +refers to any such program or work, and a "work based on the Program" +means either the Program or any derivative work under copyright law: +that is to say, a work containing the Program or a portion of it, +either verbatim or with modifications and/or translated into another +language. (Hereinafter, translation is included without limitation in +the term "modification".) Each licensee is addressed as "you". + +Activities other than copying, distribution and modification are not +covered by this License; they are outside its scope. The act of +running the Program is not restricted, and the output from the Program +is covered only if its contents constitute a work based on the +Program (independent of having been made by running the Program). +Whether that is true depends on what the Program does. + + 1. You may copy and distribute verbatim copies of the Program's +source code as you receive it, in any medium, provided that you +conspicuously and appropriately publish on each copy an appropriate +copyright notice and disclaimer of warranty; keep intact all the +notices that refer to this License and to the absence of any warranty; +and give any other recipients of the Program a copy of this License +along with the Program. + +You may charge a fee for the physical act of transferring a copy, and +you may at your option offer warranty protection in exchange for a fee. + + 2. You may modify your copy or copies of the Program or any portion +of it, thus forming a work based on the Program, and copy and +distribute such modifications or work under the terms of Section 1 +above, provided that you also meet all of these conditions: + + a) You must cause the modified files to carry prominent notices + stating that you changed the files and the date of any change. + + b) You must cause any work that you distribute or publish, that in + whole or in part contains or is derived from the Program or any + part thereof, to be licensed as a whole at no charge to all third + parties under the terms of this License. + + c) If the modified program normally reads commands interactively + when run, you must cause it, when started running for such + interactive use in the most ordinary way, to print or display an + announcement including an appropriate copyright notice and a + notice that there is no warranty (or else, saying that you provide + a warranty) and that users may redistribute the program under + these conditions, and telling the user how to view a copy of this + License. (Exception: if the Program itself is interactive but + does not normally print such an announcement, your work based on + the Program is not required to print an announcement.) + +These requirements apply to the modified work as a whole. If +identifiable sections of that work are not derived from the Program, +and can be reasonably considered independent and separate works in +themselves, then this License, and its terms, do not apply to those +sections when you distribute them as separate works. But when you +distribute the same sections as part of a whole which is a work based +on the Program, the distribution of the whole must be on the terms of +this License, whose permissions for other licensees extend to the +entire whole, and thus to each and every part regardless of who wrote it. + +Thus, it is not the intent of this section to claim rights or contest +your rights to work written entirely by you; rather, the intent is to +exercise the right to control the distribution of derivative or +collective works based on the Program. + +In addition, mere aggregation of another work not based on the Program +with the Program (or with a work based on the Program) on a volume of +a storage or distribution medium does not bring the other work under +the scope of this License. + + 3. You may copy and distribute the Program (or a work based on it, +under Section 2) in object code or executable form under the terms of +Sections 1 and 2 above provided that you also do one of the following: + + a) Accompany it with the complete corresponding machine-readable + source code, which must be distributed under the terms of Sections + 1 and 2 above on a medium customarily used for software interchange; or, + + b) Accompany it with a written offer, valid for at least three + years, to give any third party, for a charge no more than your + cost of physically performing source distribution, a complete + machine-readable copy of the corresponding source code, to be + distributed under the terms of Sections 1 and 2 above on a medium + customarily used for software interchange; or, + + c) Accompany it with the information you received as to the offer + to distribute corresponding source code. (This alternative is + allowed only for noncommercial distribution and only if you + received the program in object code or executable form with such + an offer, in accord with Subsection b above.) + +The source code for a work means the preferred form of the work for +making modifications to it. For an executable work, complete source +code means all the source code for all modules it contains, plus any +associated interface definition files, plus the scripts used to +control compilation and installation of the executable. However, as a +special exception, the source code distributed need not include +anything that is normally distributed (in either source or binary +form) with the major components (compiler, kernel, and so on) of the +operating system on which the executable runs, unless that component +itself accompanies the executable. + +If distribution of executable or object code is made by offering +access to copy from a designated place, then offering equivalent +access to copy the source code from the same place counts as +distribution of the source code, even though third parties are not +compelled to copy the source along with the object code. + + 4. You may not copy, modify, sublicense, or distribute the Program +except as expressly provided under this License. Any attempt +otherwise to copy, modify, sublicense or distribute the Program is +void, and will automatically terminate your rights under this License. +However, parties who have received copies, or rights, from you under +this License will not have their licenses terminated so long as such +parties remain in full compliance. + + 5. You are not required to accept this License, since you have not +signed it. However, nothing else grants you permission to modify or +distribute the Program or its derivative works. These actions are +prohibited by law if you do not accept this License. Therefore, by +modifying or distributing the Program (or any work based on the +Program), you indicate your acceptance of this License to do so, and +all its terms and conditions for copying, distributing or modifying +the Program or works based on it. + + 6. Each time you redistribute the Program (or any work based on the +Program), the recipient automatically receives a license from the +original licensor to copy, distribute or modify the Program subject to +these terms and conditions. You may not impose any further +restrictions on the recipients' exercise of the rights granted herein. +You are not responsible for enforcing compliance by third parties to +this License. + + 7. If, as a consequence of a court judgment or allegation of patent +infringement or for any other reason (not limited to patent issues), +conditions are imposed on you (whether by court order, agreement or +otherwise) that contradict the conditions of this License, they do not +excuse you from the conditions of this License. If you cannot +distribute so as to satisfy simultaneously your obligations under this +License and any other pertinent obligations, then as a consequence you +may not distribute the Program at all. For example, if a patent +license would not permit royalty-free redistribution of the Program by +all those who receive copies directly or indirectly through you, then +the only way you could satisfy both it and this License would be to +refrain entirely from distribution of the Program. + +If any portion of this section is held invalid or unenforceable under +any particular circumstance, the balance of the section is intended to +apply and the section as a whole is intended to apply in other +circumstances. + +It is not the purpose of this section to induce you to infringe any +patents or other property right claims or to contest validity of any +such claims; this section has the sole purpose of protecting the +integrity of the free software distribution system, which is +implemented by public license practices. Many people have made +generous contributions to the wide range of software distributed +through that system in reliance on consistent application of that +system; it is up to the author/donor to decide if he or she is willing +to distribute software through any other system and a licensee cannot +impose that choice. + +This section is intended to make thoroughly clear what is believed to +be a consequence of the rest of this License. + + 8. If the distribution and/or use of the Program is restricted in +certain countries either by patents or by copyrighted interfaces, the +original copyright holder who places the Program under this License +may add an explicit geographical distribution limitation excluding +those countries, so that distribution is permitted only in or among +countries not thus excluded. In such case, this License incorporates +the limitation as if written in the body of this License. + + 9. The Free Software Foundation may publish revised and/or new versions +of the General Public License from time to time. Such new versions will +be similar in spirit to the present version, but may differ in detail to +address new problems or concerns. + +Each version is given a distinguishing version number. If the Program +specifies a version number of this License which applies to it and "any +later version", you have the option of following the terms and conditions +either of that version or of any later version published by the Free +Software Foundation. If the Program does not specify a version number of +this License, you may choose any version ever published by the Free Software +Foundation. + + 10. If you wish to incorporate parts of the Program into other free +programs whose distribution conditions are different, write to the author +to ask for permission. For software which is copyrighted by the Free +Software Foundation, write to the Free Software Foundation; we sometimes +make exceptions for this. Our decision will be guided by the two goals +of preserving the free status of all derivatives of our free software and +of promoting the sharing and reuse of software generally. + + NO WARRANTY + + 11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY +FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN +OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES +PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED +OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF +MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS +TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE +PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING, +REPAIR OR CORRECTION. + + 12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING +WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MAY MODIFY AND/OR +REDISTRIBUTE THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, +INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING +OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED +TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY +YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER +PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE +POSSIBILITY OF SUCH DAMAGES. + + END OF TERMS AND CONDITIONS + + How to Apply These Terms to Your New Programs + + If you develop a new program, and you want it to be of the greatest +possible use to the public, the best way to achieve this is to make it +free software which everyone can redistribute and change under these terms. + + To do so, attach the following notices to the program. It is safest +to attach them to the start of each source file to most effectively +convey the exclusion of warranty; and each file should have at least +the "copyright" line and a pointer to where the full notice is found. + + + Copyright (C) + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; either version 2 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License + along with this program; if not, write to the Free Software + Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA + + +Also add information on how to contact you by electronic and paper mail. + +If the program is interactive, make it output a short notice like this +when it starts in an interactive mode: + + Gnomovision version 69, Copyright (C) year name of author + Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'. + This is free software, and you are welcome to redistribute it + under certain conditions; type `show c' for details. + +The hypothetical commands `show w' and `show c' should show the appropriate +parts of the General Public License. Of course, the commands you use may +be called something other than `show w' and `show c'; they could even be +mouse-clicks or menu items--whatever suits your program. + +You should also get your employer (if you work as a programmer) or your +school, if any, to sign a "copyright disclaimer" for the program, if +necessary. Here is a sample; alter the names: + + Yoyodyne, Inc., hereby disclaims all copyright interest in the program + `Gnomovision' (which makes passes at compilers) written by James Hacker. + + , 1 April 1989 + Ty Coon, President of Vice + +This General Public License does not permit incorporating your program into +proprietary programs. If your program is a subroutine library, you may +consider it more useful to permit linking proprietary applications with the +library. If this is what you want to do, use the GNU Library General +Public License instead of this License. + +``` + diff --git a/jalview_java/legal/java.desktop/giflib.md b/jalview_java/legal/java.desktop/giflib.md new file mode 100644 index 0000000..a2c1e7e --- /dev/null +++ b/jalview_java/legal/java.desktop/giflib.md @@ -0,0 +1,26 @@ +## GIFLIB v5.1.4 + +### GIFLIB License +
+
+The GIFLIB distribution is Copyright (c) 1997 Eric S. Raymond
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+THE SOFTWARE.
+
+
diff --git a/jalview_java/legal/java.desktop/harfbuzz.md b/jalview_java/legal/java.desktop/harfbuzz.md new file mode 100644 index 0000000..b8625f2 --- /dev/null +++ b/jalview_java/legal/java.desktop/harfbuzz.md @@ -0,0 +1,64 @@ +## Harfbuzz v1.8.2 + +### Harfbuzz License + +http://cgit.freedesktop.org/harfbuzz/tree/COPYING + +
+
+HarfBuzz is licensed under the so-called "Old MIT" license. Details follow.
+For parts of HarfBuzz that are licensed under different licenses see individual
+files names COPYING in subdirectories where applicable.
+
+Copyright © 2010,2011,2012  Google, Inc.
+Copyright © 2012  Mozilla Foundation
+Copyright © 2011  Codethink Limited
+Copyright © 2008,2010  Nokia Corporation and/or its subsidiary(-ies)
+Copyright © 2009  Keith Stribley
+Copyright © 2009  Martin Hosken and SIL International
+Copyright © 2007  Chris Wilson
+Copyright © 2006  Behdad Esfahbod
+Copyright © 2005  David Turner
+Copyright © 2004,2007,2008,2009,2010  Red Hat, Inc.
+Copyright © 1998-2004  David Turner and Werner Lemberg
+
+For full copyright notices consult the individual files in the package.
+
+
+Permission is hereby granted, without written agreement and without
+license or royalty fees, to use, copy, modify, and distribute this
+software and its documentation for any purpose, provided that the
+above copyright notice and the following two paragraphs appear in
+all copies of this software.
+
+IN NO EVENT SHALL THE COPYRIGHT HOLDER BE LIABLE TO ANY PARTY FOR
+DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES
+ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN
+IF THE COPYRIGHT HOLDER HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH
+DAMAGE.
+
+THE COPYRIGHT HOLDER SPECIFICALLY DISCLAIMS ANY WARRANTIES, INCLUDING,
+BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND
+FITNESS FOR A PARTICULAR PURPOSE.  THE SOFTWARE PROVIDED HEREUNDER IS
+ON AN "AS IS" BASIS, AND THE COPYRIGHT HOLDER HAS NO OBLIGATION TO
+PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR MODIFICATIONS.
+
+All source code, except for one section, is licensed as above. The one
+exception is licensed with a slightly different MIT variant:
+The contents of this directory are licensed under the following terms:
+
+Copyright (C) 2012 Grigori Goronzy 
+
+Permission to use, copy, modify, and/or distribute this software for any
+purpose with or without fee is hereby granted, provided that the above
+copyright notice and this permission notice appear in all copies.
+
+THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES
+WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF
+MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR
+ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
+WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
+ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF
+OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
+
+
diff --git a/jalview_java/legal/java.desktop/jpeg.md b/jalview_java/legal/java.desktop/jpeg.md new file mode 100644 index 0000000..da64b2f --- /dev/null +++ b/jalview_java/legal/java.desktop/jpeg.md @@ -0,0 +1,83 @@ +## Independent JPEG Group: JPEG release 6b + +### JPEG License +
+
+Must reproduce following license in documentation and/or other materials
+provided with distribution:
+
+The authors make NO WARRANTY or representation, either express or implied,
+with respect to this software, its quality, accuracy, merchantability, or
+fitness for a particular purpose.  This software is provided "AS IS",
+and you, its user, assume the entire risk as to its quality and accuracy.
+
+This software is copyright (C) 1991-1998, Thomas G. Lane.
+All Rights Reserved except as specified below.
+
+Permission is hereby granted to use, copy, modify, and distribute
+this software (or portions thereof) for any purpose, without fee,
+subject to these conditions:
+
+(1) If any part of the source code for this software is distributed,
+then this README file must be included, with this copyright and no-warranty
+notice unaltered; and any additions, deletions, or changes to the original
+files must be clearly indicated in accompanying documentation.
+
+(2) If only executable code is distributed, then the accompanying documentation
+must state that "this software is based in part on the work of the
+Independent JPEG Group".
+
+(3) Permission for use of this software is granted only if the user accepts
+full responsibility for any undesirable consequences; the authors accept
+NO LIABILITY for damages of any kind.
+
+These conditions apply to any software derived from or based on the IJG code,
+not just to the unmodified library.  If you use our work, you ought to
+acknowledge us.
+
+Permission is NOT granted for the use of any IJG author's name or company name
+in advertising or publicity relating to this software or products derived
+from it.  This software may be referred to only as "the Independent JPEG
+Group's software".
+
+We specifically permit and encourage the use of this software as the basis
+of commercial products, provided that all warranty or liability claims are
+assumed by the product vendor.
+
+
+ansi2knr.c is included in this distribution by permission of L. Peter Deutsch,
+sole proprietor of its copyright holder, Aladdin Enterprises of Menlo Park, CA.
+ansi2knr.c is NOT covered by the above copyright and conditions, but instead
+by the usual distribution terms of the Free Software Foundation; principally,
+that you must include source code if you redistribute it.
+(See the file ansi2knr.c for full details.)  However, since ansi2knr.c is
+not needed as part of any program generated from the IJG code, this does not
+limit you more than the foregoing paragraphs do.
+
+The Unix configuration script "configure" was produced with GNU Autoconf.
+It is copyright by the Free Software Foundation but is freely distributable.
+The same holds for its supporting scripts (config.guess, config.sub,
+ltconfig, ltmain.sh).  Another support script, install-sh, is copyright
+by M.I.T. but is also freely distributable.
+
+It appears that the arithmetic coding option of the JPEG spec is covered
+by patents owned by IBM, AT&T, and Mitsubishi.  Hence arithmetic coding
+cannot legally be used without obtaining one or more licenses.  For this
+reason, support for arithmetic coding has been removed from the free
+JPEG software. (Since arithmetic coding provides only a marginal gain
+over the unpatented Huffman mode, it is unlikely that very many
+implementations will support it.) So far as we are aware, there are
+no patent restrictions on the remaining code.
+
+The IJG distribution formerly included code to read and write GIF files.
+To avoid entanglement with the Unisys LZW patent, GIF reading support
+has been removed altogether, and the GIF writer has been simplified to
+produce "uncompressed GIFs".  This technique does not use the LZW algorithm;
+the resulting GIF files are larger than usual, but are readable by all
+standard GIF decoders.
+
+We are required to state that "The Graphics Interchange Format(c) is
+the Copyright property of CompuServe Incorporated.  GIF(sm) is a
+Service Mark property of CompuServe Incorporated."
+
+
diff --git a/jalview_java/legal/java.desktop/lcms.md b/jalview_java/legal/java.desktop/lcms.md new file mode 100644 index 0000000..a8a0632 --- /dev/null +++ b/jalview_java/legal/java.desktop/lcms.md @@ -0,0 +1,27 @@ +## Little Color Management System (LCMS) v2.9 + +### LCMS License +
+
+Little Color Management System
+Copyright (c) 1998-2011 Marti Maria Saguer
+
+Permission is hereby granted, free of charge, to any person obtaining
+a copy of this software and associated documentation files (the "Software"),
+to deal in the Software without restriction, including without limitation
+the rights to use, copy, modify, merge, publish, distribute, sublicense,
+and/or sell copies of the Software, and to permit persons to whom the Software
+is furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO
+THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+
diff --git a/jalview_java/legal/java.desktop/libpng.md b/jalview_java/legal/java.desktop/libpng.md new file mode 100644 index 0000000..746946c --- /dev/null +++ b/jalview_java/legal/java.desktop/libpng.md @@ -0,0 +1,112 @@ +## libpng v1.6.35 + +### libpng License +
+
+This copy of the libpng notices is provided for your convenience.  In case of
+any discrepancy between this copy and the notices in the file png.h that is
+included in the libpng distribution, the latter shall prevail.
+
+COPYRIGHT NOTICE, DISCLAIMER, and LICENSE:
+
+If you modify libpng you may insert additional notices immediately following
+this sentence.
+
+This code is released under the libpng license.
+
+libpng versions 1.0.7, July 1, 2000 through 1.6.35, September 29, 2017 are
+Copyright (c) 2000-2002, 2004, 2006-2018 Glenn Randers-Pehrson, are
+derived from libpng-1.0.6, and are distributed according to the same
+disclaimer and license as libpng-1.0.6 with the following individuals
+added to the list of Contributing Authors:
+
+   Simon-Pierre Cadieux
+   Eric S. Raymond
+   Mans Rullgard
+   Cosmin Truta
+   Gilles Vollant
+   James Yu
+   Mandar Sahastrabuddhe
+   Google Inc.
+   Vadim Barkov
+
+and with the following additions to the disclaimer:
+
+   There is no warranty against interference with your enjoyment of the
+   library or against infringement.  There is no warranty that our
+   efforts or the library will fulfill any of your particular purposes
+   or needs.  This library is provided with all faults, and the entire
+   risk of satisfactory quality, performance, accuracy, and effort is with
+   the user.
+
+Some files in the "contrib" directory and some configure-generated
+files that are distributed with libpng have other copyright owners and
+are released under other open source licenses.
+
+libpng versions 0.97, January 1998, through 1.0.6, March 20, 2000, are
+Copyright (c) 1998-2000 Glenn Randers-Pehrson, are derived from
+libpng-0.96, and are distributed according to the same disclaimer and
+license as libpng-0.96, with the following individuals added to the list
+of Contributing Authors:
+
+   Tom Lane
+   Glenn Randers-Pehrson
+   Willem van Schaik
+
+libpng versions 0.89, June 1996, through 0.96, May 1997, are
+Copyright (c) 1996-1997 Andreas Dilger, are derived from libpng-0.88,
+and are distributed according to the same disclaimer and license as
+libpng-0.88, with the following individuals added to the list of
+Contributing Authors:
+
+   John Bowler
+   Kevin Bracey
+   Sam Bushell
+   Magnus Holmgren
+   Greg Roelofs
+   Tom Tanner
+
+Some files in the "scripts" directory have other copyright owners
+but are released under this license.
+
+libpng versions 0.5, May 1995, through 0.88, January 1996, are
+Copyright (c) 1995-1996 Guy Eric Schalnat, Group 42, Inc.
+
+For the purposes of this copyright and license, "Contributing Authors"
+is defined as the following set of individuals:
+
+   Andreas Dilger
+   Dave Martindale
+   Guy Eric Schalnat
+   Paul Schmidt
+   Tim Wegner
+
+The PNG Reference Library is supplied "AS IS".  The Contributing Authors
+and Group 42, Inc. disclaim all warranties, expressed or implied,
+including, without limitation, the warranties of merchantability and of
+fitness for any purpose.  The Contributing Authors and Group 42, Inc.
+assume no liability for direct, indirect, incidental, special, exemplary,
+or consequential damages, which may result from the use of the PNG
+Reference Library, even if advised of the possibility of such damage.
+
+Permission is hereby granted to use, copy, modify, and distribute this
+source code, or portions hereof, for any purpose, without fee, subject
+to the following restrictions:
+
+  1. The origin of this source code must not be misrepresented.
+
+  2. Altered versions must be plainly marked as such and must not
+     be misrepresented as being the original source.
+
+  3. This Copyright notice may not be removed or altered from any
+     source or altered source distribution.
+
+The Contributing Authors and Group 42, Inc. specifically permit, without
+fee, and encourage the use of this source code as a component to
+supporting the PNG file format in commercial products.  If you use this
+source code in a product, acknowledgment is not required but would be
+appreciated.
+
+END OF COPYRIGHT NOTICE, DISCLAIMER, and LICENSE.
+
+
diff --git a/jalview_java/legal/java.desktop/mesa3d.md b/jalview_java/legal/java.desktop/mesa3d.md new file mode 100644 index 0000000..3d2168e --- /dev/null +++ b/jalview_java/legal/java.desktop/mesa3d.md @@ -0,0 +1,28 @@ +## Mesa 3-D Graphics Library v4.1 + +### Mesa License +
+
+Mesa 3-D graphics library
+Version:  4.1
+
+Copyright (C) 1999-2002  Brian Paul   All Rights Reserved.
+
+Permission is hereby granted, free of charge, to any person obtaining a
+copy of this software and associated documentation files (the "Software"),
+to deal in the Software without restriction, including without limitation
+the rights to use, copy, modify, merge, publish, distribute, sublicense,
+and/or sell copies of the Software, and to permit persons to whom the
+Software is furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included
+in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
+OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.  IN NO EVENT SHALL
+BRIAN PAUL BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN
+AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
+CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+
diff --git a/jalview_java/legal/java.desktop/opengl.md b/jalview_java/legal/java.desktop/opengl.md new file mode 100644 index 0000000..41c811b --- /dev/null +++ b/jalview_java/legal/java.desktop/opengl.md @@ -0,0 +1,27 @@ +## Khronos Group OpenGL Headers v2.1 + +### Khronos Group License +
+
+Copyright (c) 2007 The Khronos Group Inc.
+
+Permission is hereby granted, free of charge, to any person obtaining a
+copy of this software and/or associated documentation files (the
+"Materials"), to deal in the Materials without restriction, including
+without limitation the rights to use, copy, modify, merge, publish,
+distribute, sublicense, and/or sell copies of the Materials, and to
+permit persons to whom the Materials are furnished to do so, subject to
+the following conditions:
+
+The above copyright notice and this permission notice shall be included
+in all copies or substantial portions of the Materials.
+
+THE MATERIALS ARE PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
+CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
+TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
+MATERIALS OR THE USE OR OTHER DEALINGS IN THE MATERIALS.
+
+
diff --git a/jalview_java/legal/java.desktop/xwindows.md b/jalview_java/legal/java.desktop/xwindows.md new file mode 100644 index 0000000..42b2841 --- /dev/null +++ b/jalview_java/legal/java.desktop/xwindows.md @@ -0,0 +1,232 @@ +## X Windows System v6.8.2 + +### X Windows System License +
+
+This is the copyright for the files in src/java.desktop/unix/native/libawt_xawt:
+list.h, multiVis.h, wsutils.h, list.c, multiVis.c
+
+Copyright (c) 1994 Hewlett-Packard Co.
+Copyright (c) 1996 X Consortium
+
+Permission is hereby granted, free of charge, to any person obtaining
+a copy of this software and associated documentation files (the
+"Software"), to deal in the Software without restriction, including
+without limitation the rights to use, copy, modify, merge, publish,
+distribute, sublicense, and sell copies of the Software, and to
+permit persons to whom the Software is furnished to do so, subject to
+the following conditions:
+
+The above copyright notice and this permission notice shall be included
+in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
+OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+IN NO EVENT SHALL THE X CONSORTIUM BE LIABLE FOR ANY CLAIM, DAMAGES OR
+OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE,
+ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+OTHER DEALINGS IN THE SOFTWARE.
+
+Except as contained in this notice, the name of the X Consortium shall
+not be used in advertising or otherwise to promote the sale, use or
+other dealings in this Software without prior written authorization
+from the X Consortium.
+
+___________________________
+
+
+The files in motif/lib/Xm/util included this copyright:
+mkdirhier.man,xmkmf.man, chownxterm.c, makeg.man, mergelib.cpp,
+ lndir.man, makestrs.man, checktree.c, lndir.c, makestrs.c
+
+Copyright (c) 1993, 1994 X Consortium
+
+Permission is hereby granted, free of charge, to any person obtaining a
+copy of this software and associated documentation files (the "Software"),
+to deal in the Software without restriction, including without limitation
+the rights to use, copy, modify, merge, publish, distribute, sublicense,
+and/or sell copies of the Software, and to permit persons to whom the
+Software furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
+THE X CONSORTIUM BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF
+OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+Except as contained in this notice, the name of the X Consortium shall not
+be used in advertising or otherwise to promote the sale, use or other
+dealing in this Software without prior written authorization from the
+X Consortium.
+
+_____________________________
+
+Xmos_r.h:
+/*
+Copyright (c) 1996 X Consortium
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+X CONSORTIUM BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN
+AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
+CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+Except as contained in this notice, the name of the X Consortium shall not be
+used in advertising or otherwise to promote the sale, use or other dealings
+in this Software without prior written authorization from the X Consortium.
+*/
+
+_____________________________
+
+Copyright notice for extutil.h:
+Copyright 1989, 1998 The Open Group
+
+All Rights Reserved.
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+OPEN GROUP BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN
+AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
+CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+Except as contained in this notice, the name of The Open Group shall not be
+used in advertising or otherwise to promote the sale, use or other dealings
+in this Software without prior written authorization from The Open Group.
+*
+* Author: Jim Fulton, MIT The Open Group
+*
+* Xlib Extension-Writing Utilities
+*
+* This package contains utilities for writing the client API for various
+* protocol extensions. THESE INTERFACES ARE NOT PART OF THE X STANDARD AND
+* ARE SUBJECT TO CHANGE!
+*/
+
+_____________________________
+
+Copyright notice for HPkeysym.h:
+/*
+
+Copyright 1987, 1998 The Open Group
+
+All Rights Reserved.
+
+The above copyright notice and this permission notice shall be included
+in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
+OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+IN NO EVENT SHALL THE OPEN GROUP BE LIABLE FOR ANY CLAIM, DAMAGES OR
+OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE,
+ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+OTHER DEALINGS IN THE SOFTWARE.
+
+Except as contained in this notice, the name of The Open Group shall
+not be used in advertising or otherwise to promote the sale, use or
+other dealings in this Software without prior written authorization
+from The Open Group.
+
+Copyright 1987 by Digital Equipment Corporation, Maynard, Massachusetts,
+
+All Rights Reserved
+
+Permission to use, copy, modify, and distribute this software and its
+documentation for any purpose and without fee is hereby granted,
+provided that the above copyright notice appear in all copies and that
+both that copyright notice and this permission notice appear in
+supporting documentation, and that the names of Hewlett Packard
+or Digital not be
+used in advertising or publicity pertaining to distribution of the
+software without specific, written prior permission.
+
+DIGITAL DISCLAIMS ALL WARRANTIES WITH REGARD TO THIS SOFTWARE, INCLUDING
+ALL IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS, IN NO EVENT SHALL
+DIGITAL BE LIABLE FOR ANY SPECIAL, INDIRECT OR CONSEQUENTIAL DAMAGES OR
+ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS,
+WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION,
+ARISING OUT OF OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS
+SOFTWARE.
+
+HEWLETT-PACKARD MAKES NO WARRANTY OF ANY KIND WITH REGARD
+TO THIS SOFWARE, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
+WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
+PURPOSE. Hewlett-Packard shall not be liable for errors
+contained herein or direct, indirect, special, incidental or
+consequential damages in connection with the furnishing,
+performance, or use of this material.
+
+*/
+_____________________________________
+
+Copyright notice in keysym2ucs.h:
+
+Copyright 1987, 1994, 1998 The Open Group
+
+Permission to use, copy, modify, distribute, and sell this software and its
+documentation for any purpose is hereby granted without fee, provided that
+the above copyright notice appear in all copies and that both that
+copyright notice and this permission notice appear in supporting
+documentation.
+
+The above copyright notice and this permission notice shall be included
+in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
+OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+IN NO EVENT SHALL THE OPEN GROUP BE LIABLE FOR ANY CLAIM, DAMAGES OR
+OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE,
+ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+OTHER DEALINGS IN THE SOFTWARE.
+
+Except as contained in this notice, the name of The Open Group shall
+not be used in advertising or otherwise to promote the sale, use or
+other dealings in this Software without prior written authorization
+from The Open Group.
+
+
+Copyright 1987 by Digital Equipment Corporation, Maynard, Massachusetts
+
+All Rights Reserved
+
+Permission to use, copy, modify, and distribute this software and its
+documentation for any purpose and without fee is hereby granted,
+provided that the above copyright notice appear in all copies and that
+both that copyright notice and this permission notice appear in
+supporting documentation, and that the name of Digital not be
+used in advertising or publicity pertaining to distribution of the
+software without specific, written prior permission.
+
+DIGITAL DISCLAIMS ALL WARRANTIES WITH REGARD TO THIS SOFTWARE, INCLUDING
+ALL IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS, IN NO EVENT SHALL
+DIGITAL BE LIABLE FOR ANY SPECIAL, INDIRECT OR CONSEQUENTIAL DAMAGES OR
+ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS,
+WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION,
+ARISING OUT OF OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS
+SOFTWARE.
+
+******************************************************************/
+
+
diff --git a/jalview_java/legal/java.logging/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/java.logging/ADDITIONAL_LICENSE_INFO new file mode 120000 index 0000000..76b7b2f --- /dev/null +++ b/jalview_java/legal/java.logging/ADDITIONAL_LICENSE_INFO @@ -0,0 +1 @@ +../java.base/ADDITIONAL_LICENSE_INFO \ No newline at end of file diff --git a/jalview_java/legal/java.logging/ASSEMBLY_EXCEPTION b/jalview_java/legal/java.logging/ASSEMBLY_EXCEPTION new file mode 120000 index 0000000..bd8da86 --- /dev/null +++ b/jalview_java/legal/java.logging/ASSEMBLY_EXCEPTION @@ -0,0 +1 @@ +../java.base/ASSEMBLY_EXCEPTION \ No newline at end of file diff --git a/jalview_java/legal/java.logging/LICENSE b/jalview_java/legal/java.logging/LICENSE new file mode 120000 index 0000000..902705b --- /dev/null +++ b/jalview_java/legal/java.logging/LICENSE @@ -0,0 +1 @@ +../java.base/LICENSE \ No newline at end of file diff --git a/jalview_java/legal/java.management/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/java.management/ADDITIONAL_LICENSE_INFO new file mode 120000 index 0000000..76b7b2f --- /dev/null +++ b/jalview_java/legal/java.management/ADDITIONAL_LICENSE_INFO @@ -0,0 +1 @@ +../java.base/ADDITIONAL_LICENSE_INFO \ No newline at end of file diff --git a/jalview_java/legal/java.management/ASSEMBLY_EXCEPTION b/jalview_java/legal/java.management/ASSEMBLY_EXCEPTION new file mode 120000 index 0000000..bd8da86 --- /dev/null +++ b/jalview_java/legal/java.management/ASSEMBLY_EXCEPTION @@ -0,0 +1 @@ +../java.base/ASSEMBLY_EXCEPTION \ No newline at end of file diff --git a/jalview_java/legal/java.management/LICENSE b/jalview_java/legal/java.management/LICENSE new file mode 120000 index 0000000..902705b --- /dev/null +++ b/jalview_java/legal/java.management/LICENSE @@ -0,0 +1 @@ +../java.base/LICENSE \ No newline at end of file diff --git a/jalview_java/legal/java.prefs/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/java.prefs/ADDITIONAL_LICENSE_INFO new file mode 120000 index 0000000..76b7b2f --- /dev/null +++ b/jalview_java/legal/java.prefs/ADDITIONAL_LICENSE_INFO @@ -0,0 +1 @@ +../java.base/ADDITIONAL_LICENSE_INFO \ No newline at end of file diff --git a/jalview_java/legal/java.prefs/ASSEMBLY_EXCEPTION b/jalview_java/legal/java.prefs/ASSEMBLY_EXCEPTION new file mode 120000 index 0000000..bd8da86 --- /dev/null +++ b/jalview_java/legal/java.prefs/ASSEMBLY_EXCEPTION @@ -0,0 +1 @@ +../java.base/ASSEMBLY_EXCEPTION \ No newline at end of file diff --git a/jalview_java/legal/java.prefs/LICENSE b/jalview_java/legal/java.prefs/LICENSE new file mode 120000 index 0000000..902705b --- /dev/null +++ b/jalview_java/legal/java.prefs/LICENSE @@ -0,0 +1 @@ +../java.base/LICENSE \ No newline at end of file diff --git a/jalview_java/legal/java.rmi/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/java.rmi/ADDITIONAL_LICENSE_INFO new file mode 120000 index 0000000..76b7b2f --- /dev/null +++ b/jalview_java/legal/java.rmi/ADDITIONAL_LICENSE_INFO @@ -0,0 +1 @@ +../java.base/ADDITIONAL_LICENSE_INFO \ No newline at end of file diff --git a/jalview_java/legal/java.rmi/ASSEMBLY_EXCEPTION b/jalview_java/legal/java.rmi/ASSEMBLY_EXCEPTION new file mode 120000 index 0000000..bd8da86 --- /dev/null +++ b/jalview_java/legal/java.rmi/ASSEMBLY_EXCEPTION @@ -0,0 +1 @@ +../java.base/ASSEMBLY_EXCEPTION \ No newline at end of file diff --git a/jalview_java/legal/java.rmi/LICENSE b/jalview_java/legal/java.rmi/LICENSE new file mode 120000 index 0000000..902705b --- /dev/null +++ b/jalview_java/legal/java.rmi/LICENSE @@ -0,0 +1 @@ +../java.base/LICENSE \ No newline at end of file diff --git a/jalview_java/legal/java.xml.crypto/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/java.xml.crypto/ADDITIONAL_LICENSE_INFO new file mode 120000 index 0000000..76b7b2f --- /dev/null +++ b/jalview_java/legal/java.xml.crypto/ADDITIONAL_LICENSE_INFO @@ -0,0 +1 @@ +../java.base/ADDITIONAL_LICENSE_INFO \ No newline at end of file diff --git a/jalview_java/legal/java.xml.crypto/ASSEMBLY_EXCEPTION b/jalview_java/legal/java.xml.crypto/ASSEMBLY_EXCEPTION new file mode 120000 index 0000000..bd8da86 --- /dev/null +++ b/jalview_java/legal/java.xml.crypto/ASSEMBLY_EXCEPTION @@ -0,0 +1 @@ +../java.base/ASSEMBLY_EXCEPTION \ No newline at end of file diff --git a/jalview_java/legal/java.xml.crypto/LICENSE b/jalview_java/legal/java.xml.crypto/LICENSE new file mode 120000 index 0000000..902705b --- /dev/null +++ b/jalview_java/legal/java.xml.crypto/LICENSE @@ -0,0 +1 @@ +../java.base/LICENSE \ No newline at end of file diff --git a/jalview_java/legal/java.xml.crypto/santuario.md b/jalview_java/legal/java.xml.crypto/santuario.md new file mode 100644 index 0000000..03dfdd5 --- /dev/null +++ b/jalview_java/legal/java.xml.crypto/santuario.md @@ -0,0 +1,225 @@ +## Apache Santuario v2.1.1 + +### Apache Santuario Notice +
+
+  Apache Santuario - XML Security for Java
+  Copyright 1999-2018 The Apache Software Foundation
+
+  This product includes software developed at
+  The Apache Software Foundation (http://www.apache.org/).
+
+  It was originally based on software copyright (c) 2001, Institute for
+  Data Communications Systems, .
+
+  The development of this software was partly funded by the European
+  Commission in the  project in the ISIS Programme.
+
+
+ +### Apache 2.0 License +
+
+                              Apache License
+                        Version 2.0, January 2004
+                     http://www.apache.org/licenses/
+
+TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
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diff --git a/jalview_java/legal/java.xml/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/java.xml/ADDITIONAL_LICENSE_INFO new file mode 120000 index 0000000..76b7b2f --- /dev/null +++ b/jalview_java/legal/java.xml/ADDITIONAL_LICENSE_INFO @@ -0,0 +1 @@ +../java.base/ADDITIONAL_LICENSE_INFO \ No newline at end of file diff --git a/jalview_java/legal/java.xml/ASSEMBLY_EXCEPTION b/jalview_java/legal/java.xml/ASSEMBLY_EXCEPTION new file mode 120000 index 0000000..bd8da86 --- /dev/null +++ b/jalview_java/legal/java.xml/ASSEMBLY_EXCEPTION @@ -0,0 +1 @@ +../java.base/ASSEMBLY_EXCEPTION \ No newline at end of file diff --git a/jalview_java/legal/java.xml/LICENSE b/jalview_java/legal/java.xml/LICENSE new file mode 120000 index 0000000..902705b --- /dev/null +++ b/jalview_java/legal/java.xml/LICENSE @@ -0,0 +1 @@ +../java.base/LICENSE \ No newline at end of file diff --git a/jalview_java/legal/java.xml/bcel.md b/jalview_java/legal/java.xml/bcel.md new file mode 100644 index 0000000..bb434b0 --- /dev/null +++ b/jalview_java/legal/java.xml/bcel.md @@ -0,0 +1,222 @@ +## Apache Commons Byte Code Engineering Library (BCEL) Version 6.0 + +### Apache Commons BCEL Notice +
+
+    =========================================================================
+    ==  NOTICE file corresponding to the section 4 d of                    ==
+    ==  the Apache License, Version 2.0,                                   ==
+    ==  in this case for the Apache Commons BCEL distribution.             ==
+    =========================================================================
+
+   This product includes software developed by
+   The Apache Software Foundation (http://www.apache.org/).
+
+
+ +### Apache 2.0 License +
+
+                              Apache License
+                        Version 2.0, January 2004
+                     http://www.apache.org/licenses/
+
+TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
+1. Definitions.
+
+   "License" shall mean the terms and conditions for use, reproduction,
+   and distribution as defined by Sections 1 through 9 of this document.
+
+   "Licensor" shall mean the copyright owner or entity authorized by
+   the copyright owner that is granting the License.
+
+   "Legal Entity" shall mean the union of the acting entity and all
+   other entities that control, are controlled by, or are under common
+   control with that entity. For the purposes of this definition,
+   "control" means (i) the power, direct or indirect, to cause the
+   direction or management of such entity, whether by contract or
+   otherwise, or (ii) ownership of fifty percent (50%) or more of the
+   outstanding shares, or (iii) beneficial ownership of such entity.
+
+   "You" (or "Your") shall mean an individual or Legal Entity
+   exercising permissions granted by this License.
+
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+   including but not limited to software source code, documentation
+   source, and configuration files.
+
+   "Object" form shall mean any form resulting from mechanical
+   transformation or translation of a Source form, including but
+   not limited to compiled object code, generated documentation,
+   and conversions to other media types.
+
+   "Work" shall mean the work of authorship, whether in Source or
+   Object form, made available under the License, as indicated by a
+   copyright notice that is included in or attached to the work
+   (an example is provided in the Appendix below).
+
+   "Derivative Works" shall mean any work, whether in Source or Object
+   form, that is based on (or derived from) the Work and for which the
+   editorial revisions, annotations, elaborations, or other modifications
+   represent, as a whole, an original work of authorship. For the purposes
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+   the Work and Derivative Works thereof.
+
+   "Contribution" shall mean any work of authorship, including
+   the original version of the Work and any modifications or additions
+   to that Work or Derivative Works thereof, that is intentionally
+   submitted to Licensor for inclusion in the Work by the copyright owner
+   or by an individual or Legal Entity authorized to submit on behalf of
+   the copyright owner. For the purposes of this definition, "submitted"
+   means any form of electronic, verbal, or written communication sent
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+   this License, each Contributor hereby grants to You a perpetual,
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+
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+   worldwide, non-exclusive, no-charge, royalty-free, irrevocable
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+
+4. Redistribution. You may reproduce and distribute copies of the
+   Work or Derivative Works thereof in any medium, with or without
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+   meet the following conditions:
+
+   (a) You must give any other recipients of the Work or
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+
+   (b) You must cause any modified files to carry prominent notices
+       stating that You changed the files; and
+
+   (c) You must retain, in the Source form of any Derivative Works
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+
+   (d) If the Work includes a "NOTICE" text file as part of its
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+       within such NOTICE file, excluding those notices that do not
+       pertain to any part of the Derivative Works, in at least one
+       of the following places: within a NOTICE text file distributed
+       as part of the Derivative Works; within the Source form or
+       documentation, if provided along with the Derivative Works; or,
+       within a display generated by the Derivative Works, if and
+       wherever such third-party notices normally appear. The contents
+       of the NOTICE file are for informational purposes only and
+       do not modify the License. You may add Your own attribution
+       notices within Derivative Works that You distribute, alongside
+       or as an addendum to the NOTICE text from the Work, provided
+       that such additional attribution notices cannot be construed
+       as modifying the License.
+
+   You may add Your own copyright statement to Your modifications and
+   may provide additional or different license terms and conditions
+   for use, reproduction, or distribution of Your modifications, or
+   for any such Derivative Works as a whole, provided Your use,
+   reproduction, and distribution of the Work otherwise complies with
+   the conditions stated in this License.
+
+5. Submission of Contributions. Unless You explicitly state otherwise,
+   any Contribution intentionally submitted for inclusion in the Work
+   by You to the Licensor shall be under the terms and conditions of
+   this License, without any additional terms or conditions.
+   Notwithstanding the above, nothing herein shall supersede or modify
+   the terms of any separate license agreement you may have executed
+   with Licensor regarding such Contributions.
+
+6. Trademarks. This License does not grant permission to use the trade
+   names, trademarks, service marks, or product names of the Licensor,
+   except as required for reasonable and customary use in describing the
+   origin of the Work and reproducing the content of the NOTICE file.
+
+7. Disclaimer of Warranty. Unless required by applicable law or
+   agreed to in writing, Licensor provides the Work (and each
+   Contributor provides its Contributions) on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
+   implied, including, without limitation, any warranties or conditions
+   of TITLE, NON-INFRINGEMENT, MERCHANTABILITY, or FITNESS FOR A
+   PARTICULAR PURPOSE. You are solely responsible for determining the
+   appropriateness of using or redistributing the Work and assume any
+   risks associated with Your exercise of permissions under this License.
+
+8. Limitation of Liability. In no event and under no legal theory,
+   whether in tort (including negligence), contract, or otherwise,
+   unless required by applicable law (such as deliberate and grossly
+   negligent acts) or agreed to in writing, shall any Contributor be
+   liable to You for damages, including any direct, indirect, special,
+   incidental, or consequential damages of any character arising as a
+   result of this License or out of the use or inability to use the
+   Work (including but not limited to damages for loss of goodwill,
+   work stoppage, computer failure or malfunction, or any and all
+   other commercial damages or losses), even if such Contributor
+   has been advised of the possibility of such damages.
+
+9. Accepting Warranty or Additional Liability. While redistributing
+   the Work or Derivative Works thereof, You may choose to offer,
+   and charge a fee for, acceptance of support, warranty, indemnity,
+   or other liability obligations and/or rights consistent with this
+   License. However, in accepting such obligations, You may act only
+   on Your own behalf and on Your sole responsibility, not on behalf
+   of any other Contributor, and only if You agree to indemnify,
+   defend, and hold each Contributor harmless for any liability
+   incurred by, or claims asserted against, such Contributor by reason
+   of your accepting any such warranty or additional liability.
+
+END OF TERMS AND CONDITIONS
+
+APPENDIX: How to apply the Apache License to your work.
+
+   To apply the Apache License to your work, attach the following
+   boilerplate notice, with the fields enclosed by brackets "[]"
+   replaced with your own identifying information. (Don't include
+   the brackets!)  The text should be enclosed in the appropriate
+   comment syntax for the file format. We also recommend that a
+   file or class name and description of purpose be included on the
+   same "printed page" as the copyright notice for easier
+   identification within third-party archives.
+
+Copyright [yyyy] [name of copyright owner]
+
+Licensed under the Apache License, Version 2.0 (the "License");
+you may not use this file except in compliance with the License.
+You may obtain a copy of the License at
+
+    http://www.apache.org/licenses/LICENSE-2.0
+
+Unless required by applicable law or agreed to in writing, software
+distributed under the License is distributed on an "AS IS" BASIS,
+WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+See the License for the specific language governing permissions and
+limitations under the License.
+
+
diff --git a/jalview_java/legal/java.xml/dom.md b/jalview_java/legal/java.xml/dom.md new file mode 100644 index 0000000..b0fb1ae --- /dev/null +++ b/jalview_java/legal/java.xml/dom.md @@ -0,0 +1,62 @@ +## DOM Level 3 Core Specification v1.0 + +### W3C License +
+
+W3C SOFTWARE NOTICE AND LICENSE
+
+http://www.w3.org/Consortium/Legal/2002/copyright-software-20021231
+
+This work (and included software, documentation such as READMEs, or other
+related items) is being provided by the copyright holders under the following
+license. By obtaining, using and/or copying this work, you (the licensee)
+agree that you have read, understood, and will comply with the following terms
+and conditions.
+
+Permission to copy, modify, and distribute this software and its
+documentation, with or without modification, for any purpose and without fee
+or royalty is hereby granted, provided that you include the following on ALL
+copies of the software and documentation or portions thereof, including
+modifications:
+
+   1.The full text of this NOTICE in a location viewable to users of the
+   redistributed or derivative work.
+
+   2.Any pre-existing intellectual property disclaimers, notices, or terms and
+   conditions. If none exist, the W3C Software Short Notice should be included
+   (hypertext is preferred, text is permitted) within the body of any
+   redistributed or derivative code.
+
+   3.Notice of any changes or modifications to the files, including the date
+   changes were made. (We recommend you provide URIs to the location from
+   which the code is derived.)
+
+THIS SOFTWARE AND DOCUMENTATION IS PROVIDED "AS IS," AND COPYRIGHT HOLDERS
+MAKE NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR IMPLIED, INCLUDING BUT NOT
+LIMITED TO, WARRANTIES OF MERCHANTABILITY OR FITNESS FOR ANY PARTICULAR
+PURPOSE OR THAT THE USE OF THE SOFTWARE OR DOCUMENTATION WILL NOT INFRINGE ANY
+THIRD PARTY PATENTS,COPYRIGHTS, TRADEMARKS OR OTHER RIGHTS.
+
+COPYRIGHT HOLDERS WILL NOT BE LIABLE FOR ANY DIRECT, INDIRECT, SPECIAL
+OR CONSEQUENTIAL DAMAGES ARISING OUT OF ANY USE OF THE SOFTWARE OR
+DOCUMENTATION.  The name and trademarks of copyright holders may NOT be used
+in advertising or publicity pertaining to the software without specific,
+written prior permission. Title to copyright in this software and any
+associated documentation will at all times remain with copyright holders.
+
+____________________________________
+
+This formulation of W3C's notice and license became active on December 31
+2002. This version removes the copyright ownership notice such that this
+license can be used with materials other than those owned by the W3C, reflects
+that ERCIM is now a host of the W3C, includes references to this specific
+dated version of the license, and removes the ambiguous grant of "use".
+Otherwise, this version is the same as the previous version and is written so
+as to preserve the Free Software Foundation's assessment of GPL compatibility
+and OSI's certification under the Open Source Definition. Please see our
+Copyright FAQ for common questions about using materials from our site,
+including specific terms and conditions for packages like libwww, Amaya, and
+Jigsaw. Other questions about this notice can be directed to
+site-policy@w3.org.
+
+
diff --git a/jalview_java/legal/java.xml/jcup.md b/jalview_java/legal/java.xml/jcup.md new file mode 100644 index 0000000..acceffd --- /dev/null +++ b/jalview_java/legal/java.xml/jcup.md @@ -0,0 +1,24 @@ +## CUP Parser Generator for Java v 0.10k + +### CUP Parser Generator License +
+
+Copyright 1996-1999 by Scott Hudson, Frank Flannery, C. Scott Ananian
+
+Permission to use, copy, modify, and distribute this software and its
+documentation for any purpose and without fee is hereby granted, provided
+that the above copyright notice appear in all copies and that both
+the copyright notice and this permission notice and warranty disclaimer
+appear in supporting documentation, and that the names of the authors or
+their employers not be used in advertising or publicity pertaining to
+distribution of the software without specific, written prior permission.
+
+The authors and their employers disclaim all warranties with regard to
+this software, including all implied warranties of merchantability and
+fitness. In no event shall the authors or their employers be liable for
+any special, indirect or consequential damages or any damages whatsoever
+resulting from loss of use, data or profits, whether in an action of
+contract, negligence or other tortious action, arising out of or in
+connection with the use or performance of this software.
+
+
diff --git a/jalview_java/legal/java.xml/xalan.md b/jalview_java/legal/java.xml/xalan.md new file mode 100644 index 0000000..54141ef --- /dev/null +++ b/jalview_java/legal/java.xml/xalan.md @@ -0,0 +1,234 @@ +## Apache Xalan v2.7.2 + +### Apache Xalan Notice +
+
+    ======================================================================================
+    ==  NOTICE file corresponding to the section 4d of the Apache License, Version 2.0, ==
+    ==  in this case for the Apache Xalan distribution.                                 ==
+    ======================================================================================
+
+   This product includes software developed by
+   The Apache Software Foundation (http://www.apache.org/).
+
+   Specifically, we only include the XSLTC portion of the source from the Xalan distribution. 
+   The Xalan project has two processors: an interpretive one (Xalan Interpretive) and a 
+   compiled one (The XSLT Compiler (XSLTC)). We *only* use the XSLTC part of Xalan; We use
+   the source from the packages that are part of the XSLTC sources.
+
+   Portions of this software was originally based on the following:
+
+     - software copyright (c) 1999-2002, Lotus Development Corporation., http://www.lotus.com.
+     - software copyright (c) 2001-2002, Sun Microsystems., http://www.sun.com.
+     - software copyright (c) 2003, IBM Corporation., http://www.ibm.com.
+     - voluntary contributions made by Ovidiu Predescu (ovidiu@cup.hp.com) on behalf of the
+       Apache Software Foundation and was originally developed at Hewlett Packard Company.
+
+
+ +### Apache 2.0 License +
+
+                              Apache License
+                        Version 2.0, January 2004
+                     http://www.apache.org/licenses/
+
+TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
+1. Definitions.
+
+   "License" shall mean the terms and conditions for use, reproduction,
+   and distribution as defined by Sections 1 through 9 of this document.
+
+   "Licensor" shall mean the copyright owner or entity authorized by
+   the copyright owner that is granting the License.
+
+   "Legal Entity" shall mean the union of the acting entity and all
+   other entities that control, are controlled by, or are under common
+   control with that entity. For the purposes of this definition,
+   "control" means (i) the power, direct or indirect, to cause the
+   direction or management of such entity, whether by contract or
+   otherwise, or (ii) ownership of fifty percent (50%) or more of the
+   outstanding shares, or (iii) beneficial ownership of such entity.
+
+   "You" (or "Your") shall mean an individual or Legal Entity
+   exercising permissions granted by this License.
+
+   "Source" form shall mean the preferred form for making modifications,
+   including but not limited to software source code, documentation
+   source, and configuration files.
+
+   "Object" form shall mean any form resulting from mechanical
+   transformation or translation of a Source form, including but
+   not limited to compiled object code, generated documentation,
+   and conversions to other media types.
+
+   "Work" shall mean the work of authorship, whether in Source or
+   Object form, made available under the License, as indicated by a
+   copyright notice that is included in or attached to the work
+   (an example is provided in the Appendix below).
+
+   "Derivative Works" shall mean any work, whether in Source or Object
+   form, that is based on (or derived from) the Work and for which the
+   editorial revisions, annotations, elaborations, or other modifications
+   represent, as a whole, an original work of authorship. For the purposes
+   of this License, Derivative Works shall not include works that remain
+   separable from, or merely link (or bind by name) to the interfaces of,
+   the Work and Derivative Works thereof.
+
+   "Contribution" shall mean any work of authorship, including
+   the original version of the Work and any modifications or additions
+   to that Work or Derivative Works thereof, that is intentionally
+   submitted to Licensor for inclusion in the Work by the copyright owner
+   or by an individual or Legal Entity authorized to submit on behalf of
+   the copyright owner. For the purposes of this definition, "submitted"
+   means any form of electronic, verbal, or written communication sent
+   to the Licensor or its representatives, including but not limited to
+   communication on electronic mailing lists, source code control systems,
+   and issue tracking systems that are managed by, or on behalf of, the
+   Licensor for the purpose of discussing and improving the Work, but
+   excluding communication that is conspicuously marked or otherwise
+   designated in writing by the copyright owner as "Not a Contribution."
+
+   "Contributor" shall mean Licensor and any individual or Legal Entity
+   on behalf of whom a Contribution has been received by Licensor and
+   subsequently incorporated within the Work.
+
+2. Grant of Copyright License. Subject to the terms and conditions of
+   this License, each Contributor hereby grants to You a perpetual,
+   worldwide, non-exclusive, no-charge, royalty-free, irrevocable
+   copyright license to reproduce, prepare Derivative Works of,
+   publicly display, publicly perform, sublicense, and distribute the
+   Work and such Derivative Works in Source or Object form.
+
+3. Grant of Patent License. Subject to the terms and conditions of
+   this License, each Contributor hereby grants to You a perpetual,
+   worldwide, non-exclusive, no-charge, royalty-free, irrevocable
+   (except as stated in this section) patent license to make, have made,
+   use, offer to sell, sell, import, and otherwise transfer the Work,
+   where such license applies only to those patent claims licensable
+   by such Contributor that are necessarily infringed by their
+   Contribution(s) alone or by combination of their Contribution(s)
+   with the Work to which such Contribution(s) was submitted. If You
+   institute patent litigation against any entity (including a
+   cross-claim or counterclaim in a lawsuit) alleging that the Work
+   or a Contribution incorporated within the Work constitutes direct
+   or contributory patent infringement, then any patent licenses
+   granted to You under this License for that Work shall terminate
+   as of the date such litigation is filed.
+
+4. Redistribution. You may reproduce and distribute copies of the
+   Work or Derivative Works thereof in any medium, with or without
+   modifications, and in Source or Object form, provided that You
+   meet the following conditions:
+
+   (a) You must give any other recipients of the Work or
+       Derivative Works a copy of this License; and
+
+   (b) You must cause any modified files to carry prominent notices
+       stating that You changed the files; and
+
+   (c) You must retain, in the Source form of any Derivative Works
+       that You distribute, all copyright, patent, trademark, and
+       attribution notices from the Source form of the Work,
+       excluding those notices that do not pertain to any part of
+       the Derivative Works; and
+
+   (d) If the Work includes a "NOTICE" text file as part of its
+       distribution, then any Derivative Works that You distribute must
+       include a readable copy of the attribution notices contained
+       within such NOTICE file, excluding those notices that do not
+       pertain to any part of the Derivative Works, in at least one
+       of the following places: within a NOTICE text file distributed
+       as part of the Derivative Works; within the Source form or
+       documentation, if provided along with the Derivative Works; or,
+       within a display generated by the Derivative Works, if and
+       wherever such third-party notices normally appear. The contents
+       of the NOTICE file are for informational purposes only and
+       do not modify the License. You may add Your own attribution
+       notices within Derivative Works that You distribute, alongside
+       or as an addendum to the NOTICE text from the Work, provided
+       that such additional attribution notices cannot be construed
+       as modifying the License.
+
+   You may add Your own copyright statement to Your modifications and
+   may provide additional or different license terms and conditions
+   for use, reproduction, or distribution of Your modifications, or
+   for any such Derivative Works as a whole, provided Your use,
+   reproduction, and distribution of the Work otherwise complies with
+   the conditions stated in this License.
+
+5. Submission of Contributions. Unless You explicitly state otherwise,
+   any Contribution intentionally submitted for inclusion in the Work
+   by You to the Licensor shall be under the terms and conditions of
+   this License, without any additional terms or conditions.
+   Notwithstanding the above, nothing herein shall supersede or modify
+   the terms of any separate license agreement you may have executed
+   with Licensor regarding such Contributions.
+
+6. Trademarks. This License does not grant permission to use the trade
+   names, trademarks, service marks, or product names of the Licensor,
+   except as required for reasonable and customary use in describing the
+   origin of the Work and reproducing the content of the NOTICE file.
+
+7. Disclaimer of Warranty. Unless required by applicable law or
+   agreed to in writing, Licensor provides the Work (and each
+   Contributor provides its Contributions) on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
+   implied, including, without limitation, any warranties or conditions
+   of TITLE, NON-INFRINGEMENT, MERCHANTABILITY, or FITNESS FOR A
+   PARTICULAR PURPOSE. You are solely responsible for determining the
+   appropriateness of using or redistributing the Work and assume any
+   risks associated with Your exercise of permissions under this License.
+
+8. Limitation of Liability. In no event and under no legal theory,
+   whether in tort (including negligence), contract, or otherwise,
+   unless required by applicable law (such as deliberate and grossly
+   negligent acts) or agreed to in writing, shall any Contributor be
+   liable to You for damages, including any direct, indirect, special,
+   incidental, or consequential damages of any character arising as a
+   result of this License or out of the use or inability to use the
+   Work (including but not limited to damages for loss of goodwill,
+   work stoppage, computer failure or malfunction, or any and all
+   other commercial damages or losses), even if such Contributor
+   has been advised of the possibility of such damages.
+
+9. Accepting Warranty or Additional Liability. While redistributing
+   the Work or Derivative Works thereof, You may choose to offer,
+   and charge a fee for, acceptance of support, warranty, indemnity,
+   or other liability obligations and/or rights consistent with this
+   License. However, in accepting such obligations, You may act only
+   on Your own behalf and on Your sole responsibility, not on behalf
+   of any other Contributor, and only if You agree to indemnify,
+   defend, and hold each Contributor harmless for any liability
+   incurred by, or claims asserted against, such Contributor by reason
+   of your accepting any such warranty or additional liability.
+
+END OF TERMS AND CONDITIONS
+
+APPENDIX: How to apply the Apache License to your work.
+
+   To apply the Apache License to your work, attach the following
+   boilerplate notice, with the fields enclosed by brackets "[]"
+   replaced with your own identifying information. (Don't include
+   the brackets!)  The text should be enclosed in the appropriate
+   comment syntax for the file format. We also recommend that a
+   file or class name and description of purpose be included on the
+   same "printed page" as the copyright notice for easier
+   identification within third-party archives.
+
+Copyright [yyyy] [name of copyright owner]
+
+Licensed under the Apache License, Version 2.0 (the "License");
+you may not use this file except in compliance with the License.
+You may obtain a copy of the License at
+
+    http://www.apache.org/licenses/LICENSE-2.0
+
+Unless required by applicable law or agreed to in writing, software
+distributed under the License is distributed on an "AS IS" BASIS,
+WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+See the License for the specific language governing permissions and
+limitations under the License.
+
+
diff --git a/jalview_java/legal/java.xml/xerces.md b/jalview_java/legal/java.xml/xerces.md new file mode 100644 index 0000000..ff0167b --- /dev/null +++ b/jalview_java/legal/java.xml/xerces.md @@ -0,0 +1,227 @@ +## Apache Xerces v2.11.0 + +### Apache Xerces Notice +
+    =========================================================================
+    == NOTICE file corresponding to section 4(d) of the Apache License, ==
+    == Version 2.0, in this case for the Apache Xerces Java distribution. ==
+    =========================================================================
+    
+    Apache Xerces Java
+    Copyright 1999-2010 The Apache Software Foundation
+    This product includes software developed at
+    The Apache Software Foundation (http://www.apache.org/).
+    Portions of this software were originally based on the following:
+    - software copyright (c) 1999, IBM Corporation., http://www.ibm.com.
+    - software copyright (c) 1999, Sun Microsystems., http://www.sun.com.
+    - voluntary contributions made by Paul Eng on behalf of the
+    Apache Software Foundation that were originally developed at iClick, Inc.,
+    software copyright (c) 1999.
+
+ +### Apache 2.0 License +
+
+                              Apache License
+                        Version 2.0, January 2004
+                     http://www.apache.org/licenses/
+
+TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
+1. Definitions.
+
+   "License" shall mean the terms and conditions for use, reproduction,
+   and distribution as defined by Sections 1 through 9 of this document.
+
+   "Licensor" shall mean the copyright owner or entity authorized by
+   the copyright owner that is granting the License.
+
+   "Legal Entity" shall mean the union of the acting entity and all
+   other entities that control, are controlled by, or are under common
+   control with that entity. For the purposes of this definition,
+   "control" means (i) the power, direct or indirect, to cause the
+   direction or management of such entity, whether by contract or
+   otherwise, or (ii) ownership of fifty percent (50%) or more of the
+   outstanding shares, or (iii) beneficial ownership of such entity.
+
+   "You" (or "Your") shall mean an individual or Legal Entity
+   exercising permissions granted by this License.
+
+   "Source" form shall mean the preferred form for making modifications,
+   including but not limited to software source code, documentation
+   source, and configuration files.
+
+   "Object" form shall mean any form resulting from mechanical
+   transformation or translation of a Source form, including but
+   not limited to compiled object code, generated documentation,
+   and conversions to other media types.
+
+   "Work" shall mean the work of authorship, whether in Source or
+   Object form, made available under the License, as indicated by a
+   copyright notice that is included in or attached to the work
+   (an example is provided in the Appendix below).
+
+   "Derivative Works" shall mean any work, whether in Source or Object
+   form, that is based on (or derived from) the Work and for which the
+   editorial revisions, annotations, elaborations, or other modifications
+   represent, as a whole, an original work of authorship. For the purposes
+   of this License, Derivative Works shall not include works that remain
+   separable from, or merely link (or bind by name) to the interfaces of,
+   the Work and Derivative Works thereof.
+
+   "Contribution" shall mean any work of authorship, including
+   the original version of the Work and any modifications or additions
+   to that Work or Derivative Works thereof, that is intentionally
+   submitted to Licensor for inclusion in the Work by the copyright owner
+   or by an individual or Legal Entity authorized to submit on behalf of
+   the copyright owner. For the purposes of this definition, "submitted"
+   means any form of electronic, verbal, or written communication sent
+   to the Licensor or its representatives, including but not limited to
+   communication on electronic mailing lists, source code control systems,
+   and issue tracking systems that are managed by, or on behalf of, the
+   Licensor for the purpose of discussing and improving the Work, but
+   excluding communication that is conspicuously marked or otherwise
+   designated in writing by the copyright owner as "Not a Contribution."
+
+   "Contributor" shall mean Licensor and any individual or Legal Entity
+   on behalf of whom a Contribution has been received by Licensor and
+   subsequently incorporated within the Work.
+
+2. Grant of Copyright License. Subject to the terms and conditions of
+   this License, each Contributor hereby grants to You a perpetual,
+   worldwide, non-exclusive, no-charge, royalty-free, irrevocable
+   copyright license to reproduce, prepare Derivative Works of,
+   publicly display, publicly perform, sublicense, and distribute the
+   Work and such Derivative Works in Source or Object form.
+
+3. Grant of Patent License. Subject to the terms and conditions of
+   this License, each Contributor hereby grants to You a perpetual,
+   worldwide, non-exclusive, no-charge, royalty-free, irrevocable
+   (except as stated in this section) patent license to make, have made,
+   use, offer to sell, sell, import, and otherwise transfer the Work,
+   where such license applies only to those patent claims licensable
+   by such Contributor that are necessarily infringed by their
+   Contribution(s) alone or by combination of their Contribution(s)
+   with the Work to which such Contribution(s) was submitted. If You
+   institute patent litigation against any entity (including a
+   cross-claim or counterclaim in a lawsuit) alleging that the Work
+   or a Contribution incorporated within the Work constitutes direct
+   or contributory patent infringement, then any patent licenses
+   granted to You under this License for that Work shall terminate
+   as of the date such litigation is filed.
+
+4. Redistribution. You may reproduce and distribute copies of the
+   Work or Derivative Works thereof in any medium, with or without
+   modifications, and in Source or Object form, provided that You
+   meet the following conditions:
+
+   (a) You must give any other recipients of the Work or
+       Derivative Works a copy of this License; and
+
+   (b) You must cause any modified files to carry prominent notices
+       stating that You changed the files; and
+
+   (c) You must retain, in the Source form of any Derivative Works
+       that You distribute, all copyright, patent, trademark, and
+       attribution notices from the Source form of the Work,
+       excluding those notices that do not pertain to any part of
+       the Derivative Works; and
+
+   (d) If the Work includes a "NOTICE" text file as part of its
+       distribution, then any Derivative Works that You distribute must
+       include a readable copy of the attribution notices contained
+       within such NOTICE file, excluding those notices that do not
+       pertain to any part of the Derivative Works, in at least one
+       of the following places: within a NOTICE text file distributed
+       as part of the Derivative Works; within the Source form or
+       documentation, if provided along with the Derivative Works; or,
+       within a display generated by the Derivative Works, if and
+       wherever such third-party notices normally appear. The contents
+       of the NOTICE file are for informational purposes only and
+       do not modify the License. You may add Your own attribution
+       notices within Derivative Works that You distribute, alongside
+       or as an addendum to the NOTICE text from the Work, provided
+       that such additional attribution notices cannot be construed
+       as modifying the License.
+
+   You may add Your own copyright statement to Your modifications and
+   may provide additional or different license terms and conditions
+   for use, reproduction, or distribution of Your modifications, or
+   for any such Derivative Works as a whole, provided Your use,
+   reproduction, and distribution of the Work otherwise complies with
+   the conditions stated in this License.
+
+5. Submission of Contributions. Unless You explicitly state otherwise,
+   any Contribution intentionally submitted for inclusion in the Work
+   by You to the Licensor shall be under the terms and conditions of
+   this License, without any additional terms or conditions.
+   Notwithstanding the above, nothing herein shall supersede or modify
+   the terms of any separate license agreement you may have executed
+   with Licensor regarding such Contributions.
+
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diff --git a/jalview_java/legal/jdk.jsobject/ADDITIONAL_LICENSE_INFO b/jalview_java/legal/jdk.jsobject/ADDITIONAL_LICENSE_INFO new file mode 120000 index 0000000..76b7b2f --- /dev/null +++ b/jalview_java/legal/jdk.jsobject/ADDITIONAL_LICENSE_INFO @@ -0,0 +1 @@ +../java.base/ADDITIONAL_LICENSE_INFO \ No newline at end of file diff --git a/jalview_java/legal/jdk.jsobject/ASSEMBLY_EXCEPTION b/jalview_java/legal/jdk.jsobject/ASSEMBLY_EXCEPTION new file mode 120000 index 0000000..bd8da86 --- /dev/null +++ b/jalview_java/legal/jdk.jsobject/ASSEMBLY_EXCEPTION @@ -0,0 +1 @@ +../java.base/ASSEMBLY_EXCEPTION \ No newline at end of file diff --git a/jalview_java/legal/jdk.jsobject/LICENSE b/jalview_java/legal/jdk.jsobject/LICENSE new file mode 120000 index 0000000..902705b --- /dev/null +++ b/jalview_java/legal/jdk.jsobject/LICENSE @@ -0,0 +1 @@ +../java.base/LICENSE \ No newline at end of file diff --git a/jalview_java/lib/classlist b/jalview_java/lib/classlist new file mode 100644 index 0000000..e4194fa --- /dev/null +++ b/jalview_java/lib/classlist @@ -0,0 +1,1146 @@ +java/lang/Object +java/lang/String +java/io/Serializable +java/lang/Comparable +java/lang/CharSequence +java/lang/Class +java/lang/reflect/GenericDeclaration +java/lang/reflect/AnnotatedElement +java/lang/reflect/Type +java/lang/Cloneable +java/lang/ClassLoader +java/lang/System +java/lang/Throwable +java/lang/Error +java/lang/ThreadDeath +java/lang/Exception +java/lang/RuntimeException +java/lang/SecurityManager +java/security/ProtectionDomain +java/security/AccessControlContext +java/security/SecureClassLoader +java/lang/ClassNotFoundException +java/lang/ReflectiveOperationException +java/lang/NoClassDefFoundError +java/lang/LinkageError +java/lang/ClassCastException +java/lang/ArrayStoreException +java/lang/VirtualMachineError +java/lang/OutOfMemoryError +java/lang/StackOverflowError +java/lang/IllegalMonitorStateException +java/lang/ref/Reference +java/lang/ref/SoftReference +java/lang/ref/WeakReference +java/lang/ref/FinalReference +java/lang/ref/PhantomReference +java/lang/ref/Finalizer +java/lang/Thread +java/lang/Runnable +java/lang/ThreadGroup +java/lang/Thread$UncaughtExceptionHandler +java/util/Properties +java/util/Hashtable +java/util/Map +java/util/Dictionary +java/lang/Module +java/lang/reflect/AccessibleObject +java/lang/reflect/Field +java/lang/reflect/Member +java/lang/reflect/Parameter +java/lang/reflect/Method +java/lang/reflect/Executable +java/lang/reflect/Constructor +jdk/internal/reflect/MagicAccessorImpl +jdk/internal/reflect/MethodAccessorImpl +jdk/internal/reflect/MethodAccessor +jdk/internal/reflect/ConstructorAccessorImpl +jdk/internal/reflect/ConstructorAccessor +jdk/internal/reflect/DelegatingClassLoader +jdk/internal/reflect/ConstantPool +jdk/internal/reflect/UnsafeStaticFieldAccessorImpl +jdk/internal/reflect/UnsafeFieldAccessorImpl +jdk/internal/reflect/FieldAccessorImpl +jdk/internal/reflect/FieldAccessor +jdk/internal/reflect/CallerSensitive +java/lang/annotation/Annotation +java/lang/invoke/DirectMethodHandle +java/lang/invoke/MethodHandle +java/lang/invoke/VarHandle +java/lang/invoke/MemberName +java/lang/invoke/ResolvedMethodName +java/lang/invoke/MethodHandleNatives +java/lang/invoke/LambdaForm +java/lang/invoke/MethodType +java/lang/BootstrapMethodError +java/lang/invoke/CallSite +java/lang/invoke/MethodHandleNatives$CallSiteContext +java/lang/invoke/ConstantCallSite +java/lang/invoke/MutableCallSite +java/lang/invoke/VolatileCallSite +java/lang/AssertionStatusDirectives +java/lang/StringBuffer +java/lang/AbstractStringBuilder +java/lang/Appendable +java/lang/StringBuilder +jdk/internal/misc/Unsafe +jdk/internal/module/Modules +java/io/ByteArrayInputStream +java/io/InputStream +java/io/Closeable +java/lang/AutoCloseable +java/net/URL +java/util/jar/Manifest +jdk/internal/loader/ClassLoaders +jdk/internal/loader/ClassLoaders$AppClassLoader +jdk/internal/loader/BuiltinClassLoader +jdk/internal/loader/ClassLoaders$PlatformClassLoader +java/security/CodeSource +java/lang/StackTraceElement +java/nio/Buffer +java/lang/StackWalker +java/lang/StackStreamFactory$AbstractStackWalker +java/lang/StackFrameInfo +java/lang/StackWalker$StackFrame +java/lang/LiveStackFrameInfo +java/lang/LiveStackFrame +java/util/concurrent/locks/AbstractOwnableSynchronizer +java/lang/Boolean +java/lang/Character +java/lang/Float +java/lang/Number +java/lang/Double +java/lang/Byte +java/lang/Short +java/lang/Integer +java/lang/Long +java/lang/NullPointerException +java/lang/ArithmeticException +java/io/ObjectStreamField +java/lang/String$CaseInsensitiveComparator +java/util/Comparator +java/security/AccessController +java/util/Set +java/util/Collection +java/lang/Iterable +java/util/ImmutableCollections$Set12 +java/util/ImmutableCollections$AbstractImmutableSet +java/util/ImmutableCollections$AbstractImmutableCollection +java/util/AbstractCollection +java/util/Objects +jdk/internal/reflect/ReflectionFactory$GetReflectionFactoryAction +java/security/PrivilegedAction +java/security/cert/Certificate +java/util/HashSet +java/util/AbstractSet +java/util/HashMap +java/util/AbstractMap +java/util/concurrent/ConcurrentHashMap +java/util/concurrent/ConcurrentMap +java/lang/Runtime +java/util/concurrent/ConcurrentHashMap$Segment +java/util/concurrent/locks/ReentrantLock +java/util/concurrent/locks/Lock +java/util/concurrent/ConcurrentHashMap$CounterCell +java/util/concurrent/ConcurrentHashMap$Node +java/util/Map$Entry +java/util/concurrent/locks/LockSupport +java/util/concurrent/ConcurrentHashMap$ReservationNode +jdk/internal/reflect/ReflectionFactory +java/lang/ref/Reference$ReferenceHandler +jdk/internal/ref/Cleaner +java/lang/ref/ReferenceQueue +java/lang/ref/ReferenceQueue$Null +java/lang/ref/ReferenceQueue$Lock +java/lang/ref/Reference$1 +jdk/internal/misc/JavaLangRefAccess +jdk/internal/misc/SharedSecrets +java/lang/ref/Finalizer$FinalizerThread +jdk/internal/misc/VM +java/lang/StringLatin1 +java/util/Properties$EntrySet +java/util/concurrent/ConcurrentHashMap$EntrySetView +java/util/concurrent/ConcurrentHashMap$CollectionView +java/util/Collections +java/util/Collections$EmptySet +java/util/Collections$EmptyList +java/util/RandomAccess +java/util/AbstractList +java/util/List +java/util/Collections$EmptyMap +java/util/Collections$SynchronizedSet +java/util/Collections$SynchronizedCollection +java/lang/reflect/Array +java/util/concurrent/ConcurrentHashMap$EntryIterator +java/util/Iterator +java/util/concurrent/ConcurrentHashMap$BaseIterator +java/util/concurrent/ConcurrentHashMap$Traverser +java/util/concurrent/ConcurrentHashMap$MapEntry +java/util/ImmutableCollections$MapN +java/util/ImmutableCollections$AbstractImmutableMap +java/lang/Math +jdk/internal/util/StaticProperty +java/lang/VersionProps +java/io/FileInputStream +java/io/FileDescriptor +java/io/FileDescriptor$1 +jdk/internal/misc/JavaIOFileDescriptorAccess +java/io/FileOutputStream +java/io/OutputStream +java/io/Flushable +java/io/BufferedInputStream +java/io/FilterInputStream +java/io/PrintStream +java/io/FilterOutputStream +java/io/BufferedOutputStream +java/io/OutputStreamWriter +java/io/Writer +sun/nio/cs/StreamEncoder +java/nio/charset/Charset +sun/nio/cs/StandardCharsets +java/nio/charset/spi/CharsetProvider +java/lang/ThreadLocal +java/util/concurrent/atomic/AtomicInteger +sun/security/action/GetPropertyAction +sun/nio/cs/UTF_8 +sun/nio/cs/Unicode +sun/nio/cs/HistoricallyNamedCharset +sun/nio/cs/UTF_8$Encoder +java/nio/charset/CharsetEncoder +java/nio/charset/CodingErrorAction +java/util/Arrays +java/nio/ByteBuffer +java/nio/Buffer$1 +jdk/internal/misc/JavaNioAccess +java/nio/HeapByteBuffer +java/nio/ByteOrder +java/io/BufferedWriter +java/lang/Terminator +java/lang/Terminator$1 +jdk/internal/misc/Signal$Handler +jdk/internal/misc/Signal +java/util/Hashtable$Entry +jdk/internal/misc/Signal$NativeHandler +java/lang/Integer$IntegerCache +jdk/internal/misc/OSEnvironment +java/lang/System$2 +jdk/internal/misc/JavaLangAccess +java/lang/IllegalArgumentException +java/lang/invoke/MethodHandleStatics +java/lang/CharacterData +java/lang/CharacterDataLatin1 +jdk/internal/module/ModuleBootstrap +java/lang/module/ModuleDescriptor +java/lang/module/ModuleDescriptor$1 +jdk/internal/misc/JavaLangModuleAccess +java/io/File +java/io/DefaultFileSystem +java/io/UnixFileSystem +java/io/FileSystem +java/io/ExpiringCache +java/io/ExpiringCache$1 +java/util/LinkedHashMap +jdk/internal/module/ModulePatcher +jdk/internal/module/SystemModuleFinders +java/net/URI +java/net/URI$1 +jdk/internal/misc/JavaNetUriAccess +jdk/internal/module/SystemModulesMap +jdk/internal/module/SystemModules$all +jdk/internal/module/SystemModules +jdk/internal/module/Builder +java/lang/module/ModuleDescriptor$Requires +java/util/ImmutableCollections +java/util/ImmutableCollections$SetN +java/lang/module/ModuleDescriptor$Exports +java/lang/module/ModuleDescriptor$Opens +java/lang/module/ModuleDescriptor$Provides +java/util/ImmutableCollections$List12 +java/util/ImmutableCollections$AbstractImmutableList +java/lang/module/ModuleDescriptor$Version +java/util/ArrayList +java/lang/module/ModuleDescriptor$Modifier +java/lang/Enum +java/lang/module/ModuleDescriptor$Requires$Modifier +jdk/internal/module/ModuleTarget +jdk/internal/module/ModuleHashes +jdk/internal/module/ModuleResolution +java/lang/module/ModuleReference +jdk/internal/module/SystemModuleFinders$2 +java/util/function/Supplier +jdk/internal/module/ModuleReferenceImpl +java/util/KeyValueHolder +jdk/internal/module/SystemModuleFinders$SystemModuleFinder +java/lang/module/ModuleFinder +jdk/internal/module/ModuleBootstrap$Counters +java/util/Optional +jdk/internal/loader/BootLoader +jdk/internal/module/ServicesCatalog +jdk/internal/loader/ClassLoaderValue +jdk/internal/loader/AbstractClassLoaderValue +jdk/internal/loader/ClassLoaders$BootClassLoader +jdk/internal/reflect/Reflection +java/util/HashMap$Node +java/lang/ClassLoader$ParallelLoaders +java/util/WeakHashMap +java/util/WeakHashMap$Entry +java/util/Collections$SetFromMap +java/util/WeakHashMap$KeySet +java/util/Vector +java/security/ProtectionDomain$JavaSecurityAccessImpl +jdk/internal/misc/JavaSecurityAccess +java/security/ProtectionDomain$Key +java/security/Principal +jdk/internal/loader/URLClassPath +java/net/URL$DefaultFactory +java/net/URLStreamHandlerFactory +java/net/URL$3 +jdk/internal/misc/JavaNetURLAccess +java/io/File$PathStatus +java/io/ExpiringCache$Entry +java/util/LinkedHashMap$Entry +sun/net/www/ParseUtil +sun/net/www/protocol/file/Handler +java/net/URLStreamHandler +java/lang/Class$ReflectionData +java/lang/Class$Atomic +java/lang/reflect/Modifier +java/lang/reflect/ReflectAccess +jdk/internal/reflect/LangReflectAccess +java/lang/Class$1 +jdk/internal/reflect/NativeConstructorAccessorImpl +jdk/internal/reflect/DelegatingConstructorAccessorImpl +java/util/ArrayDeque +java/util/Deque +java/util/Queue +jdk/internal/util/Preconditions +jdk/internal/loader/BuiltinClassLoader$LoadedModule +sun/net/www/protocol/jrt/Handler +java/util/ImmutableCollections$SetN$SetNIterator +java/lang/module/Configuration +java/lang/module/ResolvedModule +java/util/AbstractMap$1 +java/util/AbstractMap$1$1 +java/util/ImmutableCollections$MapN$1 +java/util/ImmutableCollections$MapN$MapNIterator +java/util/ImmutableCollections$Set12$1 +jdk/internal/module/ModuleLoaderMap +java/util/HashMap$TreeNode +jdk/internal/module/ModuleLoaderMap$Mapper +java/util/function/Function +java/lang/ModuleLayer +java/util/ImmutableCollections$ListN +java/util/ImmutableCollections$ListItr +java/util/ListIterator +java/util/ArrayList$Itr +java/util/Collections$UnmodifiableSet +java/util/Collections$UnmodifiableCollection +java/util/Collections$UnmodifiableCollection$1 +java/util/concurrent/CopyOnWriteArrayList +jdk/internal/module/ServicesCatalog$ServiceProvider +java/util/HashMap$KeySet +java/util/HashMap$KeyIterator +java/util/HashMap$HashIterator +java/lang/ModuleLayer$Controller +jdk/internal/module/IllegalAccessLogger$Mode +jdk/internal/module/IllegalAccessLogger$Builder +java/util/HashMap$Values +java/util/HashMap$ValueIterator +jdk/internal/module/ModuleBootstrap$2 +java/util/Collections$UnmodifiableMap +jdk/internal/module/IllegalAccessLogger +sun/launcher/LauncherHelper +java/lang/StringCoding +sun/nio/cs/ISO_8859_1 +sun/nio/cs/US_ASCII +java/lang/StringCoding$1 +java/lang/ThreadLocal$ThreadLocalMap +java/lang/ThreadLocal$ThreadLocalMap$Entry +jdk/internal/misc/TerminatingThreadLocal +java/lang/StringCoding$Result +sun/net/util/URLUtil +java/util/Locale +java/util/Locale$Cache +sun/util/locale/LocaleObjectCache +sun/util/locale/BaseLocale +sun/util/locale/BaseLocale$Cache +sun/util/locale/BaseLocale$Key +sun/util/locale/LocaleObjectCache$CacheEntry +sun/util/locale/LocaleUtils +sun/util/locale/InternalLocaleBuilder 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+jdk/internal/ref/PhantomCleanable +java/lang/ref/Cleaner$Cleanable +jdk/internal/ref/CleanerImpl$WeakCleanableRef +jdk/internal/ref/WeakCleanable +jdk/internal/ref/CleanerImpl$SoftCleanableRef +jdk/internal/ref/SoftCleanable +jdk/internal/ref/CleanerImpl$CleanerCleanable +jdk/internal/ref/CleanerFactory$1$1 +jdk/internal/misc/InnocuousThread +jdk/internal/misc/InnocuousThread$3 +jdk/internal/misc/InnocuousThread$2 +java/util/zip/ZipFile$Source +java/util/zip/ZipFile$Source$Key +java/nio/file/FileSystems +sun/nio/fs/DefaultFileSystemProvider +sun/nio/fs/MacOSXFileSystemProvider +sun/nio/fs/BsdFileSystemProvider +sun/nio/fs/UnixFileSystemProvider +sun/nio/fs/AbstractFileSystemProvider +java/nio/file/spi/FileSystemProvider +java/nio/file/StandardOpenOption +java/nio/file/OpenOption +sun/nio/fs/MacOSXFileSystem +sun/nio/fs/BsdFileSystem +sun/nio/fs/UnixFileSystem +java/nio/file/FileSystem +sun/nio/fs/UnixPath +java/nio/file/Path +java/nio/file/Watchable +sun/nio/fs/Util 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+java/lang/IncompatibleClassChangeError +java/lang/invoke/BootstrapMethodInvoker +java/lang/invoke/StringConcatFactory$1 +java/lang/invoke/StringConcatFactory$Mode +java/lang/invoke/StringConcatFactory$Recipe +java/lang/invoke/StringConcatFactory$RecipeElement +java/lang/invoke/StringConcatFactory$MethodHandleInlineCopyStrategy +java/lang/invoke/StringConcatFactory$MethodHandleInlineCopyStrategy$1 +java/lang/invoke/StringConcatFactory$MethodHandleInlineCopyStrategy$2 +java/lang/invoke/StringConcatFactory$MethodHandleInlineCopyStrategy$3 +java/lang/StringConcatHelper +java/lang/invoke/StringConcatFactory$Stringifiers +java/lang/invoke/StringConcatFactory$Stringifiers$StringifierMost +java/lang/ClassValue +java/lang/ClassValue$Entry +java/lang/ClassValue$Identity +java/lang/ClassValue$Version +java/lang/invoke/StringConcatFactory$Stringifiers$StringifierAny +java/lang/ClassValue$ClassValueMap +java/util/Arrays$ArrayList +java/lang/invoke/BoundMethodHandle$Specializer +java/lang/invoke/ClassSpecializer +java/lang/invoke/ClassSpecializer$1 +java/lang/invoke/BoundMethodHandle$SpeciesData +java/lang/invoke/ClassSpecializer$SpeciesData +java/util/ImmutableCollections$SubList +java/lang/invoke/BoundMethodHandle$Specializer$Factory +java/lang/invoke/ClassSpecializer$Factory +java/lang/invoke/BoundMethodHandle$Species_L +java/lang/invoke/DirectMethodHandle$1 +java/lang/invoke/DirectMethodHandle$Accessor +java/util/Arrays$ArrayItr +java/lang/invoke/LambdaFormEditor +java/lang/invoke/LambdaFormEditor$Transform +java/lang/invoke/LambdaFormBuffer +jdk/internal/org/objectweb/asm/FieldWriter +jdk/internal/org/objectweb/asm/FieldVisitor +java/lang/invoke/ClassSpecializer$Factory$1Var +java/util/Collections$UnmodifiableRandomAccessList +java/util/Collections$UnmodifiableList +java/lang/Byte$ByteCache +java/lang/invoke/MethodHandles$1 +sun/invoke/util/ValueConversions$WrapperCache +java/util/logging/LogManager$VisitedLoggers +java/util/function/Predicate +java/util/logging/LogManager$LoggerContext$1 +java/util/concurrent/ConcurrentHashMap$KeySetView +java/util/Collections$3 +java/util/concurrent/ConcurrentHashMap$KeyIterator +java/util/Properties$LineReader +java/util/Hashtable$Enumerator +java/lang/invoke/LambdaMetafactory +java/lang/invoke/InnerClassLambdaMetafactory +java/lang/invoke/AbstractValidatingLambdaMetafactory +java/lang/invoke/InfoFromMemberName +java/lang/invoke/MethodHandleInfo +java/lang/invoke/InnerClassLambdaMetafactory$ForwardingMethodGenerator +java/lang/invoke/TypeConvertingMethodAdapter +java/lang/invoke/InnerClassLambdaMetafactory$1 +sun/invoke/util/Wrapper$1 +java/lang/invoke/MethodHandleImpl$IntrinsicMethodHandle +java/util/ArrayList$ArrayListSpliterator +java/util/Spliterator +java/util/stream/StreamSupport +java/util/stream/ReferencePipeline$Head +java/util/stream/ReferencePipeline +java/util/stream/Stream +java/util/stream/BaseStream +java/util/stream/AbstractPipeline +java/util/stream/PipelineHelper +java/util/stream/StreamOpFlag +java/util/stream/StreamOpFlag$Type +java/util/stream/StreamOpFlag$MaskBuilder +java/util/EnumMap +java/util/EnumMap$1 +java/lang/Class$3 +java/util/HashMap$EntrySet +java/util/HashMap$EntryIterator +sun/reflect/annotation/AnnotationParser +jdk/internal/reflect/NativeMethodAccessorImpl +jdk/internal/reflect/DelegatingMethodAccessorImpl +java/util/stream/ReferencePipeline$3 +java/util/stream/ReferencePipeline$StatelessOp +java/util/stream/StreamShape +java/util/stream/ReferencePipeline$7 +java/util/stream/FindOps +java/util/stream/FindOps$FindSink$OfRef +java/util/stream/FindOps$FindSink +java/util/stream/TerminalSink +java/util/stream/Sink +java/util/function/Consumer +java/util/stream/FindOps$FindOp +java/util/stream/TerminalOp +java/lang/invoke/DirectMethodHandle$Constructor +java/util/stream/ReferencePipeline$7$1 +java/util/stream/Sink$ChainedReference +java/util/stream/ReferencePipeline$3$1 +java/util/stream/Streams$StreamBuilderImpl +java/util/stream/Stream$Builder +java/util/stream/Streams$AbstractStreamBuilderImpl +java/util/stream/Streams +java/util/IdentityHashMap$Values +java/io/FileInputStream$1 +jdk/internal/logger/BootstrapLogger +java/lang/System$Logger +sun/util/logging/PlatformLogger$Bridge +sun/util/logging/PlatformLogger$ConfigurableBridge +jdk/internal/logger/BootstrapLogger$DetectBackend +jdk/internal/logger/BootstrapLogger$DetectBackend$1 +java/util/ServiceLoader +java/util/ServiceLoader$ModuleServicesLookupIterator +java/util/Spliterators +java/util/Spliterators$EmptySpliterator$OfRef +java/util/Spliterators$EmptySpliterator +java/util/Spliterators$EmptySpliterator$OfInt +java/util/Spliterator$OfInt +java/util/Spliterator$OfPrimitive +java/util/Spliterators$EmptySpliterator$OfLong +java/util/Spliterator$OfLong +java/util/Spliterators$EmptySpliterator$OfDouble +java/util/Spliterator$OfDouble +java/util/Spliterators$1Adapter +java/util/ServiceLoader$LazyClassPathLookupIterator +java/util/ServiceLoader$2 +java/util/ServiceLoader$3 +jdk/internal/loader/AbstractClassLoaderValue$Memoizer +java/util/Collections$EmptyIterator +jdk/internal/module/Resources +jdk/internal/loader/BuiltinClassLoader$2 +jdk/internal/loader/BuiltinClassLoader$5 +jdk/internal/module/SystemModuleFinders$SystemModuleReader +java/lang/module/ModuleReader +jdk/internal/module/SystemModuleFinders$SystemImage +jdk/internal/jimage/ImageReaderFactory +jdk/internal/jimage/ImageReaderFactory$1 +jdk/internal/jimage/ImageReader +jdk/internal/jimage/ImageReader$SharedImageReader +jdk/internal/jimage/BasicImageReader +jdk/internal/jimage/BasicImageReader$1 +jdk/internal/jimage/NativeImageBuffer +jdk/internal/jimage/NativeImageBuffer$1 +jdk/internal/jimage/ImageHeader +java/nio/DirectIntBufferU +java/nio/IntBuffer +java/nio/DirectByteBufferR +java/nio/DirectIntBufferRU +jdk/internal/jimage/ImageStringsReader +jdk/internal/jimage/ImageStrings +jdk/internal/jimage/decompressor/Decompressor +java/util/Collections$EmptyEnumeration +jdk/internal/loader/BuiltinClassLoader$1 +java/lang/CompoundEnumeration +jdk/internal/loader/URLClassPath$1 +java/util/concurrent/CopyOnWriteArrayList$COWIterator +java/util/ServiceLoader$1 +java/util/ServiceLoader$ProviderImpl +java/util/ServiceLoader$Provider +jdk/internal/logger/BootstrapLogger$LoggingBackend +jdk/internal/logger/BootstrapLogger$RedirectedLoggers +jdk/internal/logger/BootstrapLogger$BootstrapExecutors +java/util/logging/LogManager$4 +java/util/logging/Logger$SystemLoggerHelper +java/util/logging/Logger$SystemLoggerHelper$1 +jdk/internal/logger/DefaultLoggerFinder$1 +java/net/InetAddress +java/net/InetAddress$1 +java/net/InetAddress$2 +jdk/internal/misc/JavaNetInetAddressAccess +java/net/InetAddress$InetAddressHolder +java/util/concurrent/ConcurrentSkipListSet +java/util/NavigableSet +java/util/SortedSet +java/util/concurrent/ConcurrentSkipListMap +java/util/concurrent/ConcurrentNavigableMap +java/util/NavigableMap +java/util/SortedMap +java/util/concurrent/ConcurrentSkipListMap$Index +java/util/concurrent/atomic/LongAdder +java/util/concurrent/atomic/Striped64 +java/util/concurrent/ConcurrentSkipListMap$Node +java/net/InetAddressImplFactory +java/net/Inet6AddressImpl +java/net/InetAddressImpl +java/net/InetAddress$PlatformNameService +java/net/InetAddress$NameService +java/net/Inet4AddressImpl +java/net/Inet4Address +java/util/Spliterators$ArraySpliterator +java/util/concurrent/ConcurrentHashMap$ForwardingNode +java/util/stream/Collectors +java/util/stream/Collector$Characteristics +java/util/EnumSet +java/util/RegularEnumSet +java/util/stream/Collectors$CollectorImpl +java/util/stream/Collector +java/util/StringJoiner +java/util/function/BiConsumer +java/util/function/BinaryOperator +java/util/stream/ReduceOps +java/util/stream/ReduceOps$3 +java/util/stream/ReduceOps$ReduceOp +java/util/stream/ReduceOps$ReduceTask +java/util/stream/AbstractTask +java/util/concurrent/CountedCompleter +java/util/concurrent/ForkJoinTask +java/util/concurrent/Future +java/util/concurrent/ForkJoinTask$ExceptionNode +java/util/concurrent/ForkJoinPool +java/util/concurrent/AbstractExecutorService +java/util/concurrent/ExecutorService +java/util/concurrent/Executor +java/lang/invoke/VarHandleLongs$FieldInstanceReadWrite +java/lang/invoke/VarHandleLongs$FieldInstanceReadOnly +java/lang/invoke/VarHandleObjects$Array +java/util/concurrent/ForkJoinPool$DefaultForkJoinWorkerThreadFactory +java/util/concurrent/ForkJoinPool$ForkJoinWorkerThreadFactory +java/util/concurrent/ForkJoinPool$1 +java/util/concurrent/ForkJoinPool$WorkQueue +java/util/concurrent/ForkJoinWorkerThread +java/util/concurrent/ThreadLocalRandom +java/util/Random +java/util/concurrent/ForkJoinPool$DefaultForkJoinWorkerThreadFactory$1 +java/util/stream/ReduceOps$3ReducingSink +java/util/stream/ReduceOps$AccumulatingSink +java/util/stream/ReduceOps$Box +java/util/ArrayList$SubList +java/time/format/DateTimeFormatter +java/time/format/DateTimeFormatterBuilder +java/time/ZoneId +java/time/temporal/TemporalQuery +java/lang/Character$CharacterCache +java/time/temporal/ChronoField +java/time/temporal/TemporalField +java/time/temporal/ChronoUnit +java/time/temporal/TemporalUnit +java/time/Duration +java/time/temporal/TemporalAmount +java/math/BigInteger +java/time/temporal/ValueRange +java/time/temporal/IsoFields +java/time/temporal/IsoFields$Field +java/time/temporal/IsoFields$Field$1 +java/time/temporal/IsoFields$Field$2 +java/time/temporal/IsoFields$Field$3 +java/time/temporal/IsoFields$Field$4 +java/time/temporal/IsoFields$Unit +java/time/temporal/JulianFields +java/time/temporal/JulianFields$Field +java/time/format/DateTimeFormatterBuilder$2 +java/time/format/SignStyle +java/time/format/DateTimeFormatterBuilder$NumberPrinterParser +java/time/format/DateTimeFormatterBuilder$DateTimePrinterParser +java/time/format/DateTimeFormatterBuilder$CharLiteralPrinterParser +java/time/format/ResolverStyle +java/time/chrono/IsoChronology +java/time/chrono/AbstractChronology +java/time/chrono/Chronology +java/util/Locale$Category +java/util/Locale$1 +java/time/format/DateTimeFormatterBuilder$CompositePrinterParser +java/time/format/DecimalStyle +java/time/format/DateTimeFormatterBuilder$SettingsParser +java/time/format/DateTimeFormatterBuilder$OffsetIdPrinterParser +java/time/format/DateTimeFormatterBuilder$FractionPrinterParser +java/time/format/DateTimeFormatterBuilder$ZoneIdPrinterParser +java/time/format/DateTimeFormatterBuilder$StringLiteralPrinterParser +java/time/format/DateTimeFormatterBuilder$InstantPrinterParser +java/lang/Long$LongCache +java/time/format/TextStyle +java/util/Collections$SingletonMap +java/time/format/DateTimeTextProvider$LocaleStore +java/util/AbstractMap$SimpleImmutableEntry +java/util/Collections$SingletonSet +java/util/Collections$1 +java/util/LinkedHashMap$LinkedEntrySet +java/util/LinkedHashMap$LinkedEntryIterator +java/util/LinkedHashMap$LinkedHashIterator +java/time/format/DateTimeTextProvider +java/time/format/DateTimeTextProvider$1 +java/util/Arrays$LegacyMergeSort +java/util/TimSort +java/time/format/DateTimeFormatterBuilder$1 +java/time/format/DateTimeFormatterBuilder$TextPrinterParser +java/time/Period +java/time/chrono/ChronoPeriod +java/time/ZoneOffset +java/time/temporal/TemporalAdjuster +java/time/ZoneRegion +java/time/zone/ZoneRules +java/time/zone/ZoneOffsetTransitionRule +java/time/LocalDateTime +java/time/temporal/Temporal +java/time/chrono/ChronoLocalDateTime +java/time/LocalDate +java/time/chrono/ChronoLocalDate +java/time/LocalTime +java/time/Clock +java/time/Clock$SystemClock +java/time/Instant +java/time/format/DateTimePrintContext +java/time/temporal/TemporalQueries +java/time/temporal/TemporalQueries$1 +java/time/temporal/TemporalQueries$2 +java/time/temporal/TemporalQueries$3 +java/time/temporal/TemporalQueries$4 +java/time/temporal/TemporalQueries$5 +java/time/temporal/TemporalQueries$6 +java/time/temporal/TemporalQueries$7 +java/time/LocalDate$1 +java/time/format/DateTimeFormatterBuilder$3 +java/time/LocalTime$1 +java/math/BigDecimal +java/math/BigDecimal$1 +java/math/RoundingMode +java/text/DateFormat +java/text/Format +java/text/spi/DateFormatProvider +java/util/spi/LocaleServiceProvider +sun/util/locale/provider/LocaleProviderAdapter +sun/util/locale/provider/LocaleProviderAdapter$Type +sun/util/locale/provider/LocaleProviderAdapter$NonExistentAdapter +sun/util/locale/provider/FallbackLocaleProviderAdapter +sun/util/locale/provider/JRELocaleProviderAdapter +sun/util/locale/provider/ResourceBundleBasedAdapter +sun/util/locale/LanguageTag +sun/util/locale/provider/LocaleResources +sun/util/resources/LocaleData +java/util/ResourceBundle$Control +java/util/ResourceBundle$Control$CandidateListCache +java/util/ResourceBundle +sun/util/locale/provider/LocaleProviderAdapter$1 +sun/util/cldr/CLDRLocaleProviderAdapter +sun/util/cldr/CLDRBaseLocaleDataMetaInfo +sun/util/locale/provider/LocaleDataMetaInfo +sun/util/locale/ParseStatus +sun/util/locale/StringTokenIterator +sun/util/cldr/CLDRLocaleProviderAdapter$1 +java/lang/invoke/DirectMethodHandle$Special +sun/util/locale/provider/DateFormatProviderImpl +sun/util/locale/provider/AvailableLanguageTags +java/util/StringTokenizer +sun/util/locale/provider/CalendarDataUtility +java/text/SimpleDateFormat +java/text/DateFormat$Field +java/text/Format$Field +java/text/AttributedCharacterIterator$Attribute +java/util/Calendar +java/util/TimeZone +sun/util/calendar/ZoneInfo +sun/util/calendar/ZoneInfoFile +sun/util/calendar/ZoneInfoFile$1 +java/io/DataInputStream +sun/util/calendar/ZoneInfoFile$ZoneOffsetTransitionRule +sun/util/spi/CalendarProvider +sun/util/locale/provider/CalendarProviderImpl +java/util/Calendar$Builder +java/util/GregorianCalendar +sun/util/calendar/CalendarSystem +sun/util/calendar/Gregorian +sun/util/calendar/BaseCalendar +sun/util/calendar/AbstractCalendar +java/util/spi/CalendarDataProvider +sun/util/locale/provider/LocaleServiceProviderPool +java/text/spi/BreakIteratorProvider +java/text/spi/CollatorProvider +java/text/spi/DateFormatSymbolsProvider +java/text/spi/DecimalFormatSymbolsProvider +java/text/spi/NumberFormatProvider +java/util/spi/CurrencyNameProvider +java/util/spi/LocaleNameProvider +java/util/spi/TimeZoneNameProvider +sun/util/locale/provider/CalendarDataUtility$CalendarWeekParameterGetter +sun/util/locale/provider/LocaleServiceProviderPool$LocalizedObjectGetter +java/util/ResourceBundle$NoFallbackControl +java/util/ResourceBundle$SingleFormatControl +java/util/LinkedList +java/util/AbstractSequentialList +java/util/LinkedList$Node +sun/util/cldr/CLDRCalendarDataProviderImpl +sun/util/locale/provider/CalendarDataProviderImpl +sun/util/logging/PlatformLogger +sun/util/logging/PlatformLogger$Level +java/lang/System$Logger$Level +jdk/internal/logger/LazyLoggers +jdk/internal/logger/LazyLoggers$1 +jdk/internal/logger/LazyLoggers$LazyLoggerFactories +jdk/internal/logger/LoggerFinderLoader +sun/util/logging/internal/LoggingProviderImpl$JULWrapper +sun/util/logging/PlatformLogger$ConfigurableBridge$LoggerConfiguration +sun/util/calendar/Gregorian$Date +sun/util/calendar/BaseCalendar$Date +sun/util/calendar/CalendarDate +sun/util/calendar/CalendarUtils +java/text/DateFormatSymbols +sun/util/locale/provider/DateFormatSymbolsProviderImpl +sun/util/resources/LocaleData$1 +sun/util/resources/LocaleData$LocaleDataStrategy +sun/util/resources/Bundles$Strategy +sun/util/resources/Bundles +sun/util/resources/Bundles$1 +java/util/ResourceBundle$1 +jdk/internal/misc/JavaUtilResourceBundleAccess +java/util/ResourceBundle$2 +sun/util/resources/Bundles$CacheKey +sun/text/resources/cldr/FormatData +java/util/ListResourceBundle +java/util/ResourceBundle$ResourceBundleProviderHelper +sun/util/resources/Bundles$BundleReference +sun/util/resources/Bundles$CacheKeyReference +java/text/NumberFormat +sun/util/locale/provider/NumberFormatProviderImpl +sun/util/locale/provider/LocaleResources$ResourceReference +java/text/DecimalFormatSymbols +sun/util/locale/provider/DecimalFormatSymbolsProviderImpl +java/text/DecimalFormat +java/text/FieldPosition +java/text/DigitList +java/util/Date +java/text/DontCareFieldPosition +java/text/DontCareFieldPosition$1 +java/text/Format$FieldDelegate +java/text/NumberFormat$Field +java/util/Formatter +java/util/regex/Pattern +java/util/regex/Pattern$1 +java/util/regex/Pattern$Node +java/util/regex/Pattern$LastNode +java/util/regex/Pattern$GroupHead +java/util/regex/Pattern$BmpCharPredicate +java/util/regex/Pattern$CharPredicate +java/util/regex/Pattern$BmpCharProperty +java/util/regex/Pattern$CharProperty +java/util/regex/Pattern$GroupTail +java/util/regex/CharPredicates +java/util/regex/Pattern$BmpCharPropertyGreedy +java/util/regex/Pattern$CharPropertyGreedy +java/util/regex/Pattern$Ques +java/util/regex/Pattern$Qtype +java/util/regex/Pattern$BranchConn +java/util/regex/Pattern$Branch +java/util/regex/Pattern$BitClass +java/util/regex/Pattern$Slice +java/util/regex/Pattern$SliceNode +java/util/regex/Pattern$Begin +java/util/regex/Pattern$First +java/util/regex/Pattern$Start +java/util/regex/Pattern$TreeInfo +java/util/regex/Matcher +java/util/regex/MatchResult +java/util/regex/IntHashSet +java/util/regex/ASCII +java/util/Formatter$FormatSpecifier +java/util/Formatter$FormatString +java/util/Formatter$Flags +java/util/Formatter$Conversion +java/util/Formattable +java/util/logging/LogRecord +java/util/logging/ConsoleHandler +java/util/logging/StreamHandler +java/util/logging/SimpleFormatter +java/util/logging/Formatter +jdk/internal/logger/SurrogateLogger +jdk/internal/logger/SimpleConsoleLogger +jdk/internal/logger/SimpleConsoleLogger$Formatting +java/util/logging/ErrorManager +java/util/logging/Handler$1 +java/util/logging/StreamHandler$1 +java/util/logging/LogManager$CloseOnReset +java/time/ZonedDateTime +java/time/chrono/ChronoZonedDateTime +java/util/logging/LogRecord$CallerFinder +java/lang/StackWalker$Option +java/lang/StackStreamFactory +java/lang/StackWalker$ExtendedOption +java/lang/StackStreamFactory$StackFrameTraverser +java/lang/StackStreamFactory$WalkerState +java/lang/StackStreamFactory$1 +java/lang/StackStreamFactory$StackFrameTraverser$StackFrameBuffer +java/lang/StackStreamFactory$FrameBuffer +java/util/stream/ReferencePipeline$2 +java/util/stream/ReferencePipeline$2$1 +java/util/logging/Level$RbAccess +java/util/ResourceBundle$CacheKey +java/util/ResourceBundle$KeyElementReference +java/util/ResourceBundle$CacheKeyReference +java/util/ResourceBundle$3 +sun/util/logging/resources/logging +java/util/ResourceBundle$BundleReference +jdk/internal/module/Checks +jdk/internal/jimage/ImageLocation +java/util/Formatter$DateTime +java/util/Formatter$FixedString +java/time/ZonedDateTime$1 +sun/text/resources/cldr/FormatData_en +java/util/IdentityHashMap$KeyIterator +java/util/IdentityHashMap$IdentityHashMapIterator diff --git a/jalview_java/lib/fontconfig.bfc b/jalview_java/lib/fontconfig.bfc new file mode 100644 index 0000000..ff37a46 Binary files /dev/null and b/jalview_java/lib/fontconfig.bfc differ diff --git a/jalview_java/lib/fontconfig.properties.src b/jalview_java/lib/fontconfig.properties.src new file mode 100644 index 0000000..e1b8cdc --- /dev/null +++ b/jalview_java/lib/fontconfig.properties.src @@ -0,0 +1,258 @@ +# +# Copyright (c) 2011, 2012, Oracle and/or its affiliates. All rights reserved. +# DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. +# +# This code is free software; you can redistribute it and/or modify it +# under the terms of the GNU General Public License version 2 only, as +# published by the Free Software Foundation. Oracle designates this +# particular file as subject to the "Classpath" exception as provided +# by Oracle in the LICENSE file that accompanied this code. +# +# This code is distributed in the hope that it will be useful, but WITHOUT +# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License +# version 2 for more details (a copy is included in the LICENSE file that +# accompanied this code). +# +# You should have received a copy of the GNU General Public License version +# 2 along with this work; if not, write to the Free Software Foundation, +# Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. +# +# Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA +# or visit www.oracle.com if you need additional information or have any +# questions. +# + +# Version + +version=1 + +# Component Font Mappings + +allfonts.chinese-ms936=SimSun +allfonts.chinese-gb18030=SimSun-18030 +allfonts.chinese-hkscs=MingLiU_HKSCS +allfonts.devanagari=Mangal +allfonts.dingbats=Wingdings +allfonts.symbol=Symbol + +serif.plain.alphabetic=Times New Roman +serif.plain.chinese-ms950=MingLiU +serif.plain.hebrew=David +serif.plain.japanese=MS Mincho +serif.plain.korean=Batang + +serif.bold.alphabetic=Times New Roman Bold +serif.bold.chinese-ms950=PMingLiU +serif.bold.hebrew=David Bold +serif.bold.japanese=MS Mincho +serif.bold.korean=Batang + +serif.italic.alphabetic=Times New Roman Italic +serif.italic.chinese-ms950=PMingLiU +serif.italic.hebrew=David +serif.italic.japanese=MS Mincho +serif.italic.korean=Batang + +serif.bolditalic.alphabetic=Times New Roman Bold Italic +serif.bolditalic.chinese-ms950=PMingLiU +serif.bolditalic.hebrew=David Bold +serif.bolditalic.japanese=MS Mincho +serif.bolditalic.korean=Batang + +sansserif.plain.alphabetic=Arial +sansserif.plain.chinese-ms950=MingLiU +sansserif.plain.hebrew=David +sansserif.plain.japanese=MS Gothic +sansserif.plain.korean=Gulim + +sansserif.bold.alphabetic=Arial Bold +sansserif.bold.chinese-ms950=PMingLiU +sansserif.bold.hebrew=David Bold +sansserif.bold.japanese=MS Gothic +sansserif.bold.korean=Gulim + +sansserif.italic.alphabetic=Arial Italic +sansserif.italic.chinese-ms950=PMingLiU +sansserif.italic.hebrew=David +sansserif.italic.japanese=MS Gothic +sansserif.italic.korean=Gulim + +sansserif.bolditalic.alphabetic=Arial Bold Italic +sansserif.bolditalic.chinese-ms950=PMingLiU +sansserif.bolditalic.hebrew=David Bold +sansserif.bolditalic.japanese=MS Gothic +sansserif.bolditalic.korean=Gulim + +monospaced.plain.alphabetic=Courier New +monospaced.plain.chinese-ms950=MingLiU +monospaced.plain.hebrew=David +monospaced.plain.japanese=MS Gothic +monospaced.plain.korean=GulimChe + +monospaced.bold.alphabetic=Courier New Bold +monospaced.bold.chinese-ms950=PMingLiU +monospaced.bold.hebrew=David Bold +monospaced.bold.japanese=MS Gothic +monospaced.bold.korean=GulimChe + +monospaced.italic.alphabetic=Courier New Italic +monospaced.italic.chinese-ms950=PMingLiU +monospaced.italic.hebrew=David +monospaced.italic.japanese=MS Gothic +monospaced.italic.korean=GulimChe + +monospaced.bolditalic.alphabetic=Courier New Bold Italic +monospaced.bolditalic.chinese-ms950=PMingLiU +monospaced.bolditalic.hebrew=David Bold +monospaced.bolditalic.japanese=MS Gothic +monospaced.bolditalic.korean=GulimChe + +dialog.plain.alphabetic=Arial +dialog.plain.chinese-ms950=MingLiU +dialog.plain.hebrew=David +dialog.plain.japanese=MS Gothic +dialog.plain.korean=Gulim + +dialog.bold.alphabetic=Arial Bold +dialog.bold.chinese-ms950=PMingLiU +dialog.bold.hebrew=David Bold +dialog.bold.japanese=MS Gothic +dialog.bold.korean=Gulim + +dialog.italic.alphabetic=Arial Italic +dialog.italic.chinese-ms950=PMingLiU +dialog.italic.hebrew=David +dialog.italic.japanese=MS Gothic +dialog.italic.korean=Gulim + +dialog.bolditalic.alphabetic=Arial Bold Italic +dialog.bolditalic.chinese-ms950=PMingLiU +dialog.bolditalic.hebrew=David Bold +dialog.bolditalic.japanese=MS Gothic +dialog.bolditalic.korean=Gulim + +dialoginput.plain.alphabetic=Courier New +dialoginput.plain.chinese-ms950=MingLiU +dialoginput.plain.hebrew=David +dialoginput.plain.japanese=MS Gothic +dialoginput.plain.korean=Gulim + +dialoginput.bold.alphabetic=Courier New Bold +dialoginput.bold.chinese-ms950=PMingLiU +dialoginput.bold.hebrew=David Bold +dialoginput.bold.japanese=MS Gothic +dialoginput.bold.korean=Gulim + +dialoginput.italic.alphabetic=Courier New Italic +dialoginput.italic.chinese-ms950=PMingLiU +dialoginput.italic.hebrew=David +dialoginput.italic.japanese=MS Gothic +dialoginput.italic.korean=Gulim + +dialoginput.bolditalic.alphabetic=Courier New Bold Italic +dialoginput.bolditalic.chinese-ms950=PMingLiU +dialoginput.bolditalic.hebrew=David Bold +dialoginput.bolditalic.japanese=MS Gothic +dialoginput.bolditalic.korean=Gulim + +# Search Sequences + +sequence.allfonts=alphabetic/default,dingbats,symbol + +sequence.serif.GBK=alphabetic,chinese-ms936,dingbats,symbol +sequence.sansserif.GBK=alphabetic,chinese-ms936,dingbats,symbol +sequence.monospaced.GBK=chinese-ms936,alphabetic,dingbats,symbol +sequence.dialog.GBK=alphabetic,chinese-ms936,dingbats,symbol +sequence.dialoginput.GBK=alphabetic,chinese-ms936,dingbats,symbol + +sequence.serif.GB18030=alphabetic,chinese-gb18030,dingbats,symbol +sequence.sansserif.GB18030=alphabetic,chinese-gb18030,dingbats,symbol +sequence.monospaced.GB18030=chinese-gb18030,alphabetic,dingbats,symbol +sequence.dialog.GB18030=alphabetic,chinese-gb18030,dingbats,symbol +sequence.dialoginput.GB18030=alphabetic,chinese-gb18030,dingbats,symbol + +sequence.serif.x-windows-950=alphabetic,chinese-ms950,dingbats,symbol +sequence.sansserif.x-windows-950=alphabetic,chinese-ms950,dingbats,symbol +sequence.monospaced.x-windows-950=chinese-ms950,alphabetic,dingbats,symbol +sequence.dialog.x-windows-950=alphabetic,chinese-ms950,dingbats,symbol +sequence.dialoginput.x-windows-950=alphabetic,chinese-ms950,dingbats,symbol + +sequence.serif.x-MS950-HKSCS=alphabetic,chinese-ms950,chinese-hkscs,dingbats,symbol +sequence.sansserif.x-MS950-HKSCS=alphabetic,chinese-ms950,chinese-hkscs,dingbats,symbol +sequence.monospaced.x-MS950-HKSCS=chinese-ms950,alphabetic,chinese-hkscs,dingbats,symbol +sequence.dialog.x-MS950-HKSCS=alphabetic,chinese-ms950,chinese-hkscs,dingbats,symbol +sequence.dialoginput.x-MS950-HKSCS=alphabetic,chinese-ms950,chinese-hkscs,dingbats,symbol + +sequence.allfonts.UTF-8.hi=alphabetic/1252,devanagari,dingbats,symbol + +sequence.allfonts.windows-1255=hebrew,alphabetic/1252,dingbats,symbol + +sequence.serif.windows-31j=alphabetic,japanese,dingbats,symbol +sequence.sansserif.windows-31j=alphabetic,japanese,dingbats,symbol +sequence.monospaced.windows-31j=japanese,alphabetic,dingbats,symbol +sequence.dialog.windows-31j=alphabetic,japanese,dingbats,symbol +sequence.dialoginput.windows-31j=alphabetic,japanese,dingbats,symbol + +sequence.serif.x-windows-949=alphabetic,korean,dingbats,symbol +sequence.sansserif.x-windows-949=alphabetic,korean,dingbats,symbol +sequence.monospaced.x-windows-949=korean,alphabetic,dingbats,symbol +sequence.dialog.x-windows-949=alphabetic,korean,dingbats,symbol +sequence.dialoginput.x-windows-949=alphabetic,korean,dingbats,symbol + +sequence.allfonts.x-windows-874=alphabetic,dingbats,symbol + +sequence.fallback=chinese-ms950,chinese-hkscs,chinese-ms936,chinese-gb18030,\ + japanese,korean + +# Exclusion Ranges + +exclusion.alphabetic=0700-1e9f,1f00-20ab,20ad-f8ff +exclusion.chinese-gb18030=0390-03d6,2200-22ef,2701-27be +exclusion.hebrew=0041-005a,0060-007a,007f-00ff,20ac-20ac + +# Monospaced to Proportional width variant mapping +# (Experimental private syntax) +proportional.MS_Gothic=MS PGothic +proportional.MS_Mincho=MS PMincho +proportional.MingLiU=PMingLiU + +# Font File Names + +filename.Arial=ARIAL.TTF +filename.Arial_Bold=ARIALBD.TTF +filename.Arial_Italic=ARIALI.TTF +filename.Arial_Bold_Italic=ARIALBI.TTF + +filename.Courier_New=COUR.TTF +filename.Courier_New_Bold=COURBD.TTF +filename.Courier_New_Italic=COURI.TTF +filename.Courier_New_Bold_Italic=COURBI.TTF + +filename.Times_New_Roman=TIMES.TTF +filename.Times_New_Roman_Bold=TIMESBD.TTF +filename.Times_New_Roman_Italic=TIMESI.TTF +filename.Times_New_Roman_Bold_Italic=TIMESBI.TTF + +filename.SimSun=SIMSUN.TTC +filename.SimSun-18030=SIMSUN18030.TTC + +filename.MingLiU=MINGLIU.TTC +filename.PMingLiU=MINGLIU.TTC +filename.MingLiU_HKSCS=hkscsm3u.ttf + +filename.David=DAVID.TTF +filename.David_Bold=DAVIDBD.TTF + +filename.MS_Mincho=MSMINCHO.TTC +filename.MS_PMincho=MSMINCHO.TTC +filename.MS_Gothic=MSGOTHIC.TTC +filename.MS_PGothic=MSGOTHIC.TTC + +filename.Gulim=gulim.TTC +filename.Batang=batang.TTC +filename.GulimChe=gulim.TTC + +filename.Mangal=MANGAL.TTF +filename.Symbol=SYMBOL.TTF +filename.Wingdings=WINGDING.TTF diff --git a/jalview_java/lib/jli/libjli.dylib b/jalview_java/lib/jli/libjli.dylib new file mode 100644 index 0000000..7beca99 Binary files /dev/null and b/jalview_java/lib/jli/libjli.dylib differ diff --git a/jalview_java/lib/jrt-fs.jar b/jalview_java/lib/jrt-fs.jar new file mode 100644 index 0000000..1f6954e Binary files /dev/null and b/jalview_java/lib/jrt-fs.jar differ diff --git a/jalview_java/lib/jspawnhelper b/jalview_java/lib/jspawnhelper new file mode 100755 index 0000000..935f19f Binary files /dev/null and b/jalview_java/lib/jspawnhelper differ diff --git a/jalview_java/lib/jvm.cfg b/jalview_java/lib/jvm.cfg new file mode 100644 index 0000000..97225c8 --- /dev/null +++ b/jalview_java/lib/jvm.cfg @@ -0,0 +1,2 @@ +-server KNOWN +-client IGNORE diff --git a/jalview_java/lib/libawt.dylib b/jalview_java/lib/libawt.dylib new file mode 100644 index 0000000..9a5983d Binary files /dev/null and b/jalview_java/lib/libawt.dylib differ diff --git a/jalview_java/lib/libawt_lwawt.dylib b/jalview_java/lib/libawt_lwawt.dylib new file mode 100644 index 0000000..b27c719 Binary files /dev/null and b/jalview_java/lib/libawt_lwawt.dylib differ diff --git a/jalview_java/lib/libfontmanager.dylib b/jalview_java/lib/libfontmanager.dylib new file mode 100644 index 0000000..6b682e9 Binary files /dev/null and b/jalview_java/lib/libfontmanager.dylib differ diff --git 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b/jalview_java/lib/libzip.dylib new file mode 100644 index 0000000..2968a5b Binary files /dev/null and b/jalview_java/lib/libzip.dylib differ diff --git a/jalview_java/lib/modules b/jalview_java/lib/modules new file mode 100644 index 0000000..0d15415 Binary files /dev/null and b/jalview_java/lib/modules differ diff --git a/jalview_java/lib/psfont.properties.ja b/jalview_java/lib/psfont.properties.ja new file mode 100644 index 0000000..d17cf40 --- /dev/null +++ b/jalview_java/lib/psfont.properties.ja @@ -0,0 +1,119 @@ +# +# +# Copyright (c) 1996, 2000, Oracle and/or its affiliates. All rights reserved. +# DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. +# +# This code is free software; you can redistribute it and/or modify it +# under the terms of the GNU General Public License version 2 only, as +# published by the Free Software Foundation. Oracle designates this +# particular file as subject to the "Classpath" exception as provided +# by Oracle in the LICENSE file that accompanied this code. +# +# This code is distributed in the hope that it will be useful, but WITHOUT +# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License +# version 2 for more details (a copy is included in the LICENSE file that +# accompanied this code). +# +# You should have received a copy of the GNU General Public License version +# 2 along with this work; if not, write to the Free Software Foundation, +# Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. +# +# Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA +# or visit www.oracle.com if you need additional information or have any +# questions. +# + +# +# Japanese PostScript printer property file +# +font.num=16 +# +serif=serif +timesroman=serif +sansserif=sansserif +helvetica=sansserif +monospaced=monospaced +courier=monospaced +dialog=sansserif +dialoginput=monospaced +# +serif.latin1.plain=Times-Roman +serif.latin1.italic=Times-Italic +serif.latin1.bolditalic=Times-BoldItalic +serif.latin1.bold=Times-Bold +# +sansserif.latin1.plain=Helvetica +sansserif.latin1.italic=Helvetica-Oblique +sansserif.latin1.bolditalic=Helvetica-BoldOblique +sansserif.latin1.bold=Helvetica-Bold +# +monospaced.latin1.plain=Courier +monospaced.latin1.italic=Courier-Oblique +monospaced.latin1.bolditalic=Courier-BoldOblique +monospaced.latin1.bold=Courier-Bold +# +serif.x11jis0208.plain=Ryumin-Light-H +serif.x11jis0208.italic=Ryumin-Light-H +serif.x11jis0208.bolditalic=Ryumin-Light-H +serif.x11jis0208.bold=Ryumin-Light-H +# +sansserif.x11jis0208.plain=GothicBBB-Medium-H +sansserif.x11jis0208.italic=GothicBBB-Medium-H +sansserif.x11jis0208.bolditalic=GothicBBB-Medium-H +sansserif.x11jis0208.bold=GothicBBB-Medium-H +# +monospaced.x11jis0208.plain=GothicBBB-Medium-H +monospaced.x11jis0208.italic=GothicBBB-Medium-H +monospaced.x11jis0208.bolditalic=GothicBBB-Medium-H +monospaced.x11jis0208.bold=GothicBBB-Medium-H +# +serif.x11jis0201.plain=Ryumin-Light.Hankaku +serif.x11jis0201.italic=Ryumin-Light.Hankaku +serif.x11jis0201.bolditalic=Ryumin-Light.Hankaku +serif.x11jis0201.bold=Ryumin-Light.Hankaku +# +sansserif.x11jis0201.plain=GothicBBB-Medium.Hankaku +sansserif.x11jis0201.italic=GothicBBB-Medium.Hankaku +sansserif.x11jis0201.bolditalic=GothicBBB-Medium.Hankaku +sansserif.x11jis0201.bold=GothicBBB-Medium.Hankaku +# +monospaced.x11jis0201.plain=GothicBBB-Medium.Hankaku +monospaced.x11jis0201.italic=GothicBBB-Medium.Hankaku +monospaced.x11jis0201.bolditalic=GothicBBB-Medium.Hankaku +monospaced.x11jis0201.bold=GothicBBB-Medium.Hankaku +# +Helvetica=0 +Helvetica-Bold=1 +Helvetica-Oblique=2 +Helvetica-BoldOblique=3 +Times-Roman=4 +Times-Bold=5 +Times-Italic=6 +Times-BoldItalic=7 +Courier=8 +Courier-Bold=9 +Courier-Oblique=10 +Courier-BoldOblique=11 +GothicBBB-Medium-H=12 +Ryumin-Light-H=13 +GothicBBB-Medium.Hankaku=14 +Ryumin-Light.Hankaku=15 +# +font.0=Helvetica ISOF +font.1=Helvetica-Bold ISOF +font.2=Helvetica-Oblique ISOF +font.3=Helvetica-BoldOblique ISOF +font.4=Times-Roman ISOF +font.5=Times-Bold ISOF +font.6=Times-Italic ISOF +font.7=Times-BoldItalic ISOF +font.8=Courier ISOF +font.9=Courier-Bold ISOF +font.10=Courier-Oblique ISOF +font.11=Courier-BoldOblique ISOF +font.12=GothicBBB-Medium-H findfont +font.13=Ryumin-Light-H findfont +font.14=GothicBBB-Medium.Hankaku findfont +font.15=Ryumin-Light.Hankaku findfont +# diff --git a/jalview_java/lib/psfontj2d.properties b/jalview_java/lib/psfontj2d.properties new file mode 100644 index 0000000..5eb2c4b --- /dev/null +++ b/jalview_java/lib/psfontj2d.properties @@ -0,0 +1,323 @@ +# +# +# Copyright (c) 1999, Oracle and/or its affiliates. All rights reserved. +# DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS FILE HEADER. +# +# This code is free software; you can redistribute it and/or modify it +# under the terms of the GNU General Public License version 2 only, as +# published by the Free Software Foundation. Oracle designates this +# particular file as subject to the "Classpath" exception as provided +# by Oracle in the LICENSE file that accompanied this code. +# +# This code is distributed in the hope that it will be useful, but WITHOUT +# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or +# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License +# version 2 for more details (a copy is included in the LICENSE file that +# accompanied this code). +# +# You should have received a copy of the GNU General Public License version +# 2 along with this work; if not, write to the Free Software Foundation, +# Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA. +# +# Please contact Oracle, 500 Oracle Parkway, Redwood Shores, CA 94065 USA +# or visit www.oracle.com if you need additional information or have any +# questions. + +# +# PostScript printer property file for Java 2D printing. +# +# WARNING: This is an internal implementation file, not a public file. +# Any customisation or reliance on the existence of this file and its +# contents or syntax is discouraged and unsupported. +# It may be incompatibly changed or removed without any notice. +# +# +font.num=35 +# +# Legacy logical font family names and logical font aliases should all +# map to the primary logical font names. +# +serif=serif +times=serif +timesroman=serif +sansserif=sansserif +helvetica=sansserif +dialog=sansserif +dialoginput=monospaced +monospaced=monospaced +courier=monospaced +# +# Next, physical fonts which can be safely mapped to standard postscript fonts +# These keys generally map to a value which is the same as the key, so +# the key/value is just a way to say the font has a mapping. +# Sometimes however we map more than one screen font to the same PS font. +# +avantgarde=avantgarde_book +avantgarde_book=avantgarde_book +avantgarde_demi=avantgarde_demi +avantgarde_book_oblique=avantgarde_book_oblique +avantgarde_demi_oblique=avantgarde_demi_oblique +# +itcavantgarde=avantgarde_book +itcavantgarde=avantgarde_book +itcavantgarde_demi=avantgarde_demi +itcavantgarde_oblique=avantgarde_book_oblique +itcavantgarde_demi_oblique=avantgarde_demi_oblique +# +bookman=bookman_light +bookman_light=bookman_light +bookman_demi=bookman_demi +bookman_light_italic=bookman_light_italic +bookman_demi_italic=bookman_demi_italic +# +# Exclude "helvetica" on its own as that's a legacy name for a logical font +helvetica_bold=helvetica_bold +helvetica_oblique=helvetica_oblique +helvetica_bold_oblique=helvetica_bold_oblique +# +itcbookman_light=bookman_light +itcbookman_demi=bookman_demi +itcbookman_light_italic=bookman_light_italic +itcbookman_demi_italic=bookman_demi_italic +# +# Exclude "courier" on its own as that's a legacy name for a logical font +courier_bold=courier_bold +courier_oblique=courier_oblique +courier_bold_oblique=courier_bold_oblique +# +courier_new=courier +courier_new_bold=courier_bold +# +monotype_century_schoolbook=newcenturyschoolbook +monotype_century_schoolbook_bold=newcenturyschoolbook_bold +monotype_century_schoolbook_italic=newcenturyschoolbook_italic +monotype_century_schoolbook_bold_italic=newcenturyschoolbook_bold_italic +# +newcenturyschoolbook=newcenturyschoolbook +newcenturyschoolbook_bold=newcenturyschoolbook_bold +newcenturyschoolbook_italic=newcenturyschoolbook_italic +newcenturyschoolbook_bold_italic=newcenturyschoolbook_bold_italic +# +palatino=palatino +palatino_bold=palatino_bold +palatino_italic=palatino_italic +palatino_bold_italic=palatino_bold_italic +# +# Exclude "times" on its own as that's a legacy name for a logical font +times_bold=times_roman_bold +times_italic=times_roman_italic +times_bold_italic=times_roman_bold_italic +# +times_roman=times_roman +times_roman_bold=times_roman_bold +times_roman_italic=times_roman_italic +times_roman_bold_italic=times_roman_bold_italic +# +times_new_roman=times_roman +times_new_roman_bold=times_roman_bold +times_new_roman_italic=times_roman_italic +times_new_roman_bold_italic=times_roman_bold_italic +# +zapfchancery_italic=zapfchancery_italic +itczapfchancery_italic=zapfchancery_italic +# +# Next the mapping of the font name + charset + style to Postscript font name +# for the logical fonts. +# +serif.latin1.plain=Times-Roman +serif.latin1.bold=Times-Bold +serif.latin1.italic=Times-Italic +serif.latin1.bolditalic=Times-BoldItalic +serif.symbol.plain=Symbol +serif.dingbats.plain=ZapfDingbats +serif.symbol.bold=Symbol +serif.dingbats.bold=ZapfDingbats +serif.symbol.italic=Symbol +serif.dingbats.italic=ZapfDingbats +serif.symbol.bolditalic=Symbol +serif.dingbats.bolditalic=ZapfDingbats +# +sansserif.latin1.plain=Helvetica +sansserif.latin1.bold=Helvetica-Bold +sansserif.latin1.italic=Helvetica-Oblique +sansserif.latin1.bolditalic=Helvetica-BoldOblique +sansserif.symbol.plain=Symbol +sansserif.dingbats.plain=ZapfDingbats +sansserif.symbol.bold=Symbol +sansserif.dingbats.bold=ZapfDingbats +sansserif.symbol.italic=Symbol +sansserif.dingbats.italic=ZapfDingbats +sansserif.symbol.bolditalic=Symbol +sansserif.dingbats.bolditalic=ZapfDingbats +# +monospaced.latin1.plain=Courier +monospaced.latin1.bold=Courier-Bold +monospaced.latin1.italic=Courier-Oblique +monospaced.latin1.bolditalic=Courier-BoldOblique +monospaced.symbol.plain=Symbol +monospaced.dingbats.plain=ZapfDingbats +monospaced.symbol.bold=Symbol +monospaced.dingbats.bold=ZapfDingbats +monospaced.symbol.italic=Symbol +monospaced.dingbats.italic=ZapfDingbats +monospaced.symbol.bolditalic=Symbol +monospaced.dingbats.bolditalic=ZapfDingbats +# +# Next the mapping of the font name + charset + style to Postscript font name +# for the physical fonts. Since these always report style as plain, the +# style key is always plain. So we map using the face name to the correct +# style for the postscript font. This is possible since the face names can +# be replied upon to be different for each style. +# However an application may try to create a Font applying a style to an +# physical name. We want to map to the correct Postscript font there too +# if possible but we do not map cases where the application tries to +# augment a style (eg ask for a bold version of a bold font) +# Defer to the 2D package to attempt create an artificially styled version +# +avantgarde_book.latin1.plain=AvantGarde-Book +avantgarde_demi.latin1.plain=AvantGarde-Demi +avantgarde_book_oblique.latin1.plain=AvantGarde-BookOblique +avantgarde_demi_oblique.latin1.plain=AvantGarde-DemiOblique +# +avantgarde_book.latin1.bold=AvantGarde-Demi +avantgarde_book.latin1.italic=AvantGarde-BookOblique +avantgarde_book.latin1.bolditalic=AvantGarde-DemiOblique +avantgarde_demi.latin1.italic=AvantGarde-DemiOblique +avantgarde_book_oblique.latin1.bold=AvantGarde-DemiOblique +# +bookman_light.latin1.plain=Bookman-Light +bookman_demi.latin1.plain=Bookman-Demi +bookman_light_italic.latin1.plain=Bookman-LightItalic +bookman_demi_italic.latin1.plain=Bookman-DemiItalic +# +bookman_light.latin1.bold=Bookman-Demi +bookman_light.latin1.italic=Bookman-LightItalic +bookman_light.latin1.bolditalic=Bookman-DemiItalic +bookman_light_bold.latin1.italic=Bookman-DemiItalic +bookman_light_italic.latin1.bold=Bookman-DemiItalic +# +courier.latin1.plain=Courier +courier_bold.latin1.plain=Courier-Bold +courier_oblique.latin1.plain=Courier-Oblique +courier_bold_oblique.latin1.plain=Courier-BoldOblique +courier.latin1.bold=Courier-Bold +courier.latin1.italic=Courier-Oblique +courier.latin1.bolditalic=Courier-BoldOblique +courier_bold.latin1.italic=Courier-BoldOblique +courier_italic.latin1.bold=Courier-BoldOblique +# +helvetica_bold.latin1.plain=Helvetica-Bold +helvetica_oblique.latin1.plain=Helvetica-Oblique +helvetica_bold_oblique.latin1.plain=Helvetica-BoldOblique +helvetica.latin1.bold=Helvetica-Bold +helvetica.latin1.italic=Helvetica-Oblique +helvetica.latin1.bolditalic=Helvetica-BoldOblique +helvetica_bold.latin1.italic=Helvetica-BoldOblique +helvetica_italic.latin1.bold=Helvetica-BoldOblique +# +newcenturyschoolbook.latin1.plain=NewCenturySchlbk-Roman +newcenturyschoolbook_bold.latin1.plain=NewCenturySchlbk-Bold +newcenturyschoolbook_italic.latin1.plain=NewCenturySchlbk-Italic +newcenturyschoolbook_bold_italic.latin1.plain=NewCenturySchlbk-BoldItalic +newcenturyschoolbook.latin1.bold=NewCenturySchlbk-Bold +newcenturyschoolbook.latin1.italic=NewCenturySchlbk-Italic +newcenturyschoolbook.latin1.bolditalic=NewCenturySchlbk-BoldItalic +newcenturyschoolbook_bold.latin1.italic=NewCenturySchlbk-BoldItalic +newcenturyschoolbook_italic.latin1.bold=NewCenturySchlbk-BoldItalic +# +palatino.latin1.plain=Palatino-Roman +palatino_bold.latin1.plain=Palatino-Bold +palatino_italic.latin1.plain=Palatino-Italic +palatino_bold_italic.latin1.plain=Palatino-BoldItalic +palatino.latin1.bold=Palatino-Bold +palatino.latin1.italic=Palatino-Italic +palatino.latin1.bolditalic=Palatino-BoldItalic +palatino_bold.latin1.italic=Palatino-BoldItalic +palatino_italic.latin1.bold=Palatino-BoldItalic +# +times_roman.latin1.plain=Times-Roman +times_roman_bold.latin1.plain=Times-Bold +times_roman_italic.latin1.plain=Times-Italic +times_roman_bold_italic.latin1.plain=Times-BoldItalic +times_roman.latin1.bold=Times-Bold +times_roman.latin1.italic=Times-Italic +times_roman.latin1.bolditalic=Times-BoldItalic +times_roman_bold.latin1.italic=Times-BoldItalic +times_roman_italic.latin1.bold=Times-BoldItalic +# +zapfchancery_italic.latin1.plain=ZapfChancery-MediumItalic +# +# Finally the mappings of PS font names to indexes. +# +AvantGarde-Book=0 +AvantGarde-BookOblique=1 +AvantGarde-Demi=2 +AvantGarde-DemiOblique=3 +Bookman-Demi=4 +Bookman-DemiItalic=5 +Bookman-Light=6 +Bookman-LightItalic=7 +Courier=8 +Courier-Bold=9 +Courier-BoldOblique=10 +Courier-Oblique=11 +Helvetica=12 +Helvetica-Bold=13 +Helvetica-BoldOblique=14 +Helvetica-Narrow=15 +Helvetica-Narrow-Bold=16 +Helvetica-Narrow-BoldOblique=17 +Helvetica-Narrow-Oblique=18 +Helvetica-Oblique=19 +NewCenturySchlbk-Bold=20 +NewCenturySchlbk-BoldItalic=21 +NewCenturySchlbk-Italic=22 +NewCenturySchlbk-Roman=23 +Palatino-Bold=24 +Palatino-BoldItalic=25 +Palatino-Italic=26 +Palatino-Roman=27 +Symbol=28 +Times-Bold=29 +Times-BoldItalic=30 +Times-Italic=31 +Times-Roman=32 +ZapfDingbats=33 +ZapfChancery-MediumItalic=34 +# +font.0=AvantGarde-Book ISOF +font.1=AvantGarde-BookOblique ISOF +font.2=AvantGarde-Demi ISOF +font.3=AvantGarde-DemiOblique ISOF +font.4=Bookman-Demi ISOF +font.5=Bookman-DemiItalic ISOF +font.6=Bookman-Light ISOF +font.7=Bookman-LightItalic ISOF +font.8=Courier ISOF +font.9=Courier-Bold ISOF +font.10=Courier-BoldOblique ISOF +font.11=Courier-Oblique ISOF +font.12=Helvetica ISOF +font.13=Helvetica-Bold ISOF +font.14=Helvetica-BoldOblique ISOF +font.15=Helvetica-Narrow ISOF +font.16=Helvetica-Narrow-Bold ISOF +font.17=Helvetica-Narrow-BoldOblique ISOF +font.18=Helvetica-Narrow-Oblique ISOF +font.19=Helvetica-Oblique ISOF +font.20=NewCenturySchlbk-Bold ISOF +font.21=NewCenturySchlbk-BoldItalic ISOF +font.22=NewCenturySchlbk-Italic ISOF +font.23=NewCenturySchlbk-Roman ISOF +font.24=Palatino-Bold ISOF +font.25=Palatino-BoldItalic ISOF +font.26=Palatino-Italic ISOF +font.27=Palatino-Roman ISOF +font.28=Symbol findfont +font.29=Times-Bold ISOF +font.30=Times-BoldItalic ISOF +font.31=Times-Italic ISOF +font.32=Times-Roman ISOF +font.33=ZapfDingbats findfont +font.34=ZapfChancery-MediumItalic ISOF +# diff --git a/jalview_java/lib/security/blacklisted.certs b/jalview_java/lib/security/blacklisted.certs new file mode 100644 index 0000000..e192c1a --- /dev/null +++ b/jalview_java/lib/security/blacklisted.certs @@ -0,0 +1,20 @@ +Algorithm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diff --git a/jalview_java/lib/security/cacerts b/jalview_java/lib/security/cacerts new file mode 100644 index 0000000..0981dbc Binary files /dev/null and b/jalview_java/lib/security/cacerts differ diff --git a/jalview_java/lib/security/default.policy b/jalview_java/lib/security/default.policy new file mode 100644 index 0000000..b0ffc99 --- /dev/null +++ b/jalview_java/lib/security/default.policy @@ -0,0 +1,211 @@ +// +// Permissions required by modules stored in a run-time image and loaded +// by the platform class loader. +// +// NOTE that this file is not intended to be modified. If additional +// permissions need to be granted to the modules in this file, it is +// recommended that they be configured in a separate policy file or +// ${java.home}/conf/security/java.policy. +// + + +grant codeBase "jrt:/java.compiler" { + permission java.security.AllPermission; +}; + + +grant codeBase "jrt:/java.net.http" { + permission java.lang.RuntimePermission "accessClassInPackage.sun.net"; + permission java.lang.RuntimePermission "accessClassInPackage.sun.net.util"; + permission java.lang.RuntimePermission "accessClassInPackage.sun.net.www"; + permission java.lang.RuntimePermission "accessClassInPackage.jdk.internal.misc"; + permission java.net.SocketPermission "*","connect,resolve"; + permission java.net.URLPermission "http:*","*:*"; + permission java.net.URLPermission "https:*","*:*"; + permission java.net.URLPermission "ws:*","*:*"; + permission java.net.URLPermission "wss:*","*:*"; + permission java.net.URLPermission "socket:*","CONNECT"; // proxy + // For request/response body processors, fromFile, asFile + permission java.io.FilePermission "<>","read,write,delete"; + permission java.util.PropertyPermission "*","read"; + permission java.net.NetPermission "getProxySelector"; +}; + +grant codeBase "jrt:/java.scripting" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/java.security.jgss" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/java.smartcardio" { + permission javax.smartcardio.CardPermission "*", "*"; + permission java.lang.RuntimePermission "loadLibrary.j2pcsc"; + permission java.lang.RuntimePermission + "accessClassInPackage.sun.security.jca"; + permission java.lang.RuntimePermission + "accessClassInPackage.sun.security.util"; + permission java.util.PropertyPermission + "javax.smartcardio.TerminalFactory.DefaultType", "read"; + permission java.util.PropertyPermission "os.name", "read"; + permission java.util.PropertyPermission "os.arch", "read"; + permission java.util.PropertyPermission "sun.arch.data.model", "read"; + permission java.util.PropertyPermission + "sun.security.smartcardio.library", "read"; + permission java.util.PropertyPermission + "sun.security.smartcardio.t0GetResponse", "read"; + permission java.util.PropertyPermission + "sun.security.smartcardio.t1GetResponse", "read"; + permission java.util.PropertyPermission + "sun.security.smartcardio.t1StripLe", "read"; + // needed for looking up native PC/SC library + permission java.io.FilePermission "<>","read"; + permission java.security.SecurityPermission "putProviderProperty.SunPCSC"; + permission java.security.SecurityPermission + "clearProviderProperties.SunPCSC"; + permission java.security.SecurityPermission + "removeProviderProperty.SunPCSC"; +}; + +grant codeBase "jrt:/java.sql" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/java.sql.rowset" { + permission java.security.AllPermission; +}; + + +grant codeBase "jrt:/java.xml.crypto" { + permission java.lang.RuntimePermission + "accessClassInPackage.sun.security.util"; + permission java.util.PropertyPermission "*", "read"; + permission java.security.SecurityPermission "putProviderProperty.XMLDSig"; + permission java.security.SecurityPermission + "clearProviderProperties.XMLDSig"; + permission java.security.SecurityPermission + "removeProviderProperty.XMLDSig"; + permission java.security.SecurityPermission + "com.sun.org.apache.xml.internal.security.register"; + permission java.security.SecurityPermission + "getProperty.jdk.xml.dsig.secureValidationPolicy"; + permission java.lang.RuntimePermission + "accessClassInPackage.com.sun.org.apache.xml.internal.*"; + permission java.lang.RuntimePermission + "accessClassInPackage.com.sun.org.apache.xpath.internal"; + permission java.lang.RuntimePermission + "accessClassInPackage.com.sun.org.apache.xpath.internal.*"; +}; + + +grant codeBase "jrt:/jdk.accessibility" { + permission java.lang.RuntimePermission "accessClassInPackage.sun.awt"; +}; + +grant codeBase "jrt:/jdk.charsets" { + permission java.util.PropertyPermission "os.name", "read"; + permission java.util.PropertyPermission "sun.nio.cs.map", "read"; + permission java.lang.RuntimePermission "charsetProvider"; + permission java.lang.RuntimePermission + "accessClassInPackage.jdk.internal.misc"; + permission java.lang.RuntimePermission "accessClassInPackage.sun.nio.cs"; +}; + +grant codeBase "jrt:/jdk.crypto.ec" { + permission java.lang.RuntimePermission + "accessClassInPackage.sun.security.*"; + permission java.lang.RuntimePermission "loadLibrary.sunec"; + permission java.security.SecurityPermission "putProviderProperty.SunEC"; + permission java.security.SecurityPermission "clearProviderProperties.SunEC"; + permission java.security.SecurityPermission "removeProviderProperty.SunEC"; +}; + +grant codeBase "jrt:/jdk.crypto.cryptoki" { + permission java.lang.RuntimePermission + "accessClassInPackage.sun.security.*"; + permission java.lang.RuntimePermission "accessClassInPackage.sun.nio.ch"; + permission java.lang.RuntimePermission "loadLibrary.j2pkcs11"; + permission java.util.PropertyPermission "sun.security.pkcs11.allowSingleThreadedModules", "read"; + permission java.util.PropertyPermission "os.name", "read"; + permission java.util.PropertyPermission "os.arch", "read"; + permission java.util.PropertyPermission "jdk.crypto.KeyAgreement.legacyKDF", "read"; + permission java.security.SecurityPermission "putProviderProperty.*"; + permission java.security.SecurityPermission "clearProviderProperties.*"; + permission java.security.SecurityPermission "removeProviderProperty.*"; + permission java.security.SecurityPermission + "getProperty.auth.login.defaultCallbackHandler"; + permission java.security.SecurityPermission "authProvider.*"; + // Needed for reading PKCS11 config file and NSS library check + permission java.io.FilePermission "<>", "read"; +}; + +grant codeBase "jrt:/jdk.desktop" { + permission java.lang.RuntimePermission "accessClassInPackage.com.sun.awt"; +}; + +grant codeBase "jrt:/jdk.dynalink" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.httpserver" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.internal.le" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.internal.vm.compiler" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.internal.vm.compiler.management" { + permission java.lang.RuntimePermission "accessClassInPackage.org.graalvm.compiler.hotspot"; + permission java.lang.RuntimePermission "accessClassInPackage.jdk.vm.ci.runtime"; + permission java.lang.RuntimePermission "accessClassInPackage.sun.management.spi"; + permission java.lang.RuntimePermission "sun.management.spi.PlatformMBeanProvider.subclass"; +}; + +grant codeBase "jrt:/jdk.jsobject" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.localedata" { + permission java.lang.RuntimePermission "accessClassInPackage.sun.text.*"; + permission java.lang.RuntimePermission "accessClassInPackage.sun.util.*"; +}; + +grant codeBase "jrt:/jdk.naming.dns" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.scripting.nashorn" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.scripting.nashorn.shell" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.security.auth" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.security.jgss" { + permission java.security.AllPermission; +}; + +grant codeBase "jrt:/jdk.zipfs" { + permission java.io.FilePermission "<>", "read,write,delete"; + permission java.lang.RuntimePermission "fileSystemProvider"; + permission java.util.PropertyPermission "os.name", "read"; +}; + +// permissions needed by applications using java.desktop module +grant { + permission java.lang.RuntimePermission "accessClassInPackage.com.sun.beans"; + permission java.lang.RuntimePermission "accessClassInPackage.com.sun.beans.*"; + permission java.lang.RuntimePermission "accessClassInPackage.com.sun.java.swing.plaf.*"; + permission java.lang.RuntimePermission "accessClassInPackage.com.apple.*"; +}; diff --git a/jalview_java/lib/security/public_suffix_list.dat b/jalview_java/lib/security/public_suffix_list.dat new file mode 100644 index 0000000..9b0f023 Binary files /dev/null and b/jalview_java/lib/security/public_suffix_list.dat differ diff --git a/jalview_java/lib/server/Xusage.txt b/jalview_java/lib/server/Xusage.txt new file mode 100644 index 0000000..8940af8 --- /dev/null +++ b/jalview_java/lib/server/Xusage.txt @@ -0,0 +1,22 @@ + -Xmixed mixed mode execution (default) + -Xint interpreted mode execution only + -Xbootclasspath: + set search path for bootstrap classes and resources + -Xbootclasspath/a: + append to end of bootstrap class path + -Xbootclasspath/p: + prepend in front of bootstrap class path + -Xnoclassgc disable class garbage collection + -Xlog: control JVM logging, use -Xlog:help for details + -Xbatch disable background compilation + -Xms set initial Java heap size + -Xmx set maximum Java heap size + -Xss set java thread stack size + -Xfuture enable strictest checks, anticipating future default + -Xrs reduce use of OS signals by Java/VM (see documentation) + -Xcheck:jni perform additional checks for JNI functions + -Xshare:off do not attempt to use shared class data + -Xshare:auto use shared class data if possible (default) + -Xshare:on require using shared class data, otherwise fail. + +The -X options are non-standard and subject to change without notice. diff --git a/jalview_java/lib/server/libjsig.dylib b/jalview_java/lib/server/libjsig.dylib new file mode 100644 index 0000000..5c0b243 Binary files /dev/null and b/jalview_java/lib/server/libjsig.dylib differ diff --git a/jalview_java/lib/server/libjvm.dylib b/jalview_java/lib/server/libjvm.dylib new file mode 100644 index 0000000..25c866c Binary files /dev/null and b/jalview_java/lib/server/libjvm.dylib differ diff --git a/jalview_java/lib/tzdb.dat b/jalview_java/lib/tzdb.dat new file mode 100644 index 0000000..3f2d54b Binary files /dev/null and b/jalview_java/lib/tzdb.dat differ diff --git a/jalview_java/release b/jalview_java/release new file mode 100644 index 0000000..5172fe5 --- /dev/null +++ b/jalview_java/release @@ -0,0 +1,2 @@ +JAVA_VERSION="11" +MODULES="java.base java.datatransfer java.xml java.prefs java.desktop java.logging java.management java.rmi java.xml.crypto jdk.jsobject" diff --git a/src/jalview/gui/Desktop.java b/src/jalview/gui/Desktop.java index 647971e..4d00b1f 100644 --- a/src/jalview/gui/Desktop.java +++ b/src/jalview/gui/Desktop.java @@ -354,13 +354,6 @@ public class Desktop extends jalview.jbgui.GDesktop doConfigureStructurePrefs(); setTitle("Jalview " + jalview.bin.Cache.getProperty("VERSION")); - // setDefaultCloseOperation(JFrame.EXIT_ON_CLOSE); - /* comments - * galore - * to - * change the line numbers - */ - /* if (!Platform.isAMac()) {