From: kiramt <k.mourao@dundee.ac.uk>
Date: Tue, 14 Nov 2017 14:10:30 +0000 (+0000)
Subject: JAL-2811 Missed commit
X-Git-Tag: Release_2_10_3b1~28^2~2^2~2
X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=commitdiff_plain;h=d5cb0190f46cbbf4cfd6f0f20cfe562cda005984

JAL-2811 Missed commit
---

diff --git a/src/jalview/gui/SeqCanvas.java b/src/jalview/gui/SeqCanvas.java
index 4aa7851..fdd51c2 100755
--- a/src/jalview/gui/SeqCanvas.java
+++ b/src/jalview/gui/SeqCanvas.java
@@ -1276,8 +1276,8 @@ public class SeqCanvas extends JComponent implements ViewportListenerI
     BufferedImage cursorImage = null;
 
     // convert the cursorY into a position on the visible alignment
-    int cursor_ypos = av.getAlignment().getHiddenColumns()
-            .findColumnPosition(cursorY);
+    int cursor_ypos = av.getAlignment().getHiddenSequences()
+            .findIndexWithoutHiddenSeqs(cursorY);
 
     // don't do work unless we have to
     if (av.cursorMode && cursor_ypos >= startSeq && cursor_ypos <= endSeq)