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JAL-4356 release notes
[jalview.git] / src / ext /
2023-11-20 Ben SoaresJAL-4348 Add newer versions of Chimera and ChimeraX... tree | commitdiff
2022-06-06 Ben SoaresJAL-4020 class reformatting tree | commitdiff
2022-06-06 Ben SoaresJAL-4020 Added search for PyMOLWinWithConsole.bat ... tree | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 tree | commitdiff
2022-02-17 Jim ProcterJAL-3691 patch toUpper/toLower to use Locale.ROOT for... tree | commitdiff
2021-09-14 Ben SoaresJAL-2422 Also look in ~/Applications for ChimeraX on... tree | commitdiff
2021-09-14 Ben SoaresJAL-2422 Fixed URL encoding of REST calls (broken paths... tree | commitdiff
2021-09-13 Ben SoaresJAL-2422 Fixed URL encoding of REST calls (broken paths... tree | commitdiff
2021-09-13 Ben SoaresMerge branch 'develop' into feature/JAL-2422ChimeraX tree | commitdiff
2021-09-13 Ben SoaresJAL-2422 Added linux rpm and deb install locations... tree | commitdiff
2020-06-29 gmungocJAL-3674 more finessed asynchronous structure commands tree | commitdiff
2020-06-26 Jim ProcterJAL-3672 debug=false means no debug output tree | commitdiff
2020-06-23 gmungocJAL-3518 separation of ChimeraXManager, pull up of... tree | commitdiff
2020-05-21 gmungocJAL-2422 highlight ChimeraX selection (ChimeraX-1.0... tree | commitdiff
2020-05-11 gmungocJAL-2422 ChimeraX paths (versions up to 1.0) added... tree | commitdiff
2020-05-11 gmungocJAL-1333 additional Chimera versions for Windows instal... tree | commitdiff
2020-02-21 gmungocJAL-3518 more extraction of ChimeraX commands as overrides tree | commitdiff
2020-02-04 gmungocJAL-2422 remove temporary debug code tree | commitdiff
2020-02-04 gmungocJAL-2422 fixed stopProgressBar (broken in pull up refac... tree | commitdiff
2020-01-31 gmungocJAL-2422 temporary hacks removed; use hex colours for... tree | commitdiff
2020-01-28 gmungocJAL-2422 ChimeraX added to Preferences tree | commitdiff
2020-01-14 gmungocJAL-2422 proof of concept adaptations for ChimeraX... tree | commitdiff
2019-12-13 gmungocJAL-2422 basic proof of concept of ChimeraX opened... tree | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... tree | commitdiff
2018-12-13 Ben SoaresJAL-3130 Fixing a few more tests that pass on a Mac... tree | commitdiff
2018-06-06 gmungocJAL-3013 ensure Chimera as a symlink gets resolved tree | commitdiff
2018-05-25 Jim ProcterJAL-2994 add a few future release points for good measu... feature/JAL-2994chimeraPath tree | commitdiff
2018-05-25 gmungocJAL-2994 temporary patch with paths to Chimera for... tree | commitdiff
2017-10-24 gmungocJAL-2738 update spike branch with latest tree | commitdiff
2017-10-18 Jim ProcterJAL-2782 remark about possible exception due to unsafe... tree | commitdiff
2016-12-02 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-30 Jim ProcterMerge branch 'features/JAL-2320_closeChimeraAction... tree | commitdiff
2016-11-29 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-24 Jim ProcterJAL-2325 applied BSD license for chimera/StrucViz2... tree | commitdiff
2016-11-14 gmungocJAL-2295 JAL-2296 skeleton 'attributes to features... tree | commitdiff
2016-11-10 gmungocJAL-2320 thread to close Chimera viewer panel if Chimer... features/JAL-2320_closeChimeraAction tree | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch tree | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... tree | commitdiff
2016-09-29 gmungocJAL-1903 increase REST reply timeout from 5 to 15 seconds tree | commitdiff
2016-05-26 gmungocJAL-2035 relocated a comment tree | commitdiff
2016-04-01 tcofoegbuJAL-2048 Update to structureviz2 package from cytoscape tree | commitdiff
2016-03-31 tcofoegbuJAL-2035 improvement to add binding to multiple model tree | commitdiff
2016-03-25 tcofoegbuJAL-2035 improvement to bind Jalview to Chimera model... tree | commitdiff
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 tree | commitdiff
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright tree | commitdiff
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... tree | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports tree | commitdiff
2015-08-19 gmungocJAL-1742 suppress 'add chain' option for Jmol, pull... tree | commitdiff
2015-07-08 gmungocJAL-1759 merge from develop tree | commitdiff
2015-07-02 gmungocJAL-1677 check all response lines when parsing REST... tree | commitdiff
2015-06-05 gmungocJAL-1588 error dialog if Chimera project opened on... tree | commitdiff
2015-06-05 gmungocJAL-1622 Chimera command timeout increased to 5 secs... tree | commitdiff
2015-05-05 gmungocJAL-1725 first version of Jetty server / chimera select... tree | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch tree | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... tree | commitdiff
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... tree | commitdiff
2015-01-26 gmungocJAL-1588 restoring saved Chimera session(s) tree | commitdiff
2014-12-28 gmungocMerge branch 'features/JAL-1596ChimeraREST' into develop tree | commitdiff
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7 tree | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes tree | commitdiff
2014-12-03 gmungocJAL-1609 wip on Chimera colour by sequence tree | commitdiff
2014-11-28 gmungocJAL-1596 first REST interface coded tree | commitdiff
2014-11-27 gmungocJAL-1603 if Chimera selected in Preferences, warn if... tree | commitdiff
2014-11-17 gmungocJAL-1528 new Preference CHIMERA_PATH (Preferences ... tree | commitdiff
2014-11-17 gmungocJAL-1528 bug fixes and adjustments to Chimera interface tree | commitdiff
2014-11-13 gmungocJAL-1528 new Preference CHIMERA_PATH (Preferences ... tree | commitdiff
2014-11-12 gmungocJAL-1528 bug fixes and adjustments to Chimera interface tree | commitdiff
2014-09-23 darolmarJAL-1355 tree | commitdiff
2014-07-22 j.procter@dundee... JAL-1333 more superposition debugging and deadlock... tree | commitdiff
2014-07-18 j.procter@dundee... JAL-1333 more refinements - deadlocks still possible... tree | commitdiff
2014-07-04 j.procter@dundee... JAL-1333 more abstraction and refactoring and working... tree | commitdiff
2014-07-02 Jim Procter JAL-1333 Chimera specific code extracted from the... tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 tree | commitdiff
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 tree | commitdiff
2014-05-22 Jim ProcterJAL-1503 update version in GPL header tree | commitdiff
2014-01-29 Jim ProcterJAL-1432 updated copyright notices tree | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header tree | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) tree | commitdiff
2011-09-27 jprocterapply version 2.7 copyright tree | commitdiff
2010-09-23 jprocterapply jalview code style tree | commitdiff
2010-09-23 jprocterJalview 2.6 source licence tree | commitdiff
2010-04-30 jprocterjalview 2.5 release banner tree | commitdiff
2009-06-08 jprocterapply gpl development license tree | commitdiff
2008-09-04 jproctermerge from 2_4_Release branch tree | commitdiff
2008-04-29 jprocteradded SeqSearch service interface. Documented and refac... tree | commitdiff
2007-02-07 amwaterhouseFormatting tree | commitdiff
2006-08-21 amwaterhouseheader updated tree | commitdiff
2005-09-30 amwaterhouseRemove redundancy in Eclipse tree | commitdiff
2005-08-22 jprocterregenerated stubs from wsdl and removed old vamsas... tree | commitdiff
2005-08-22 jprocterReplaced by jpred.java and associated stubs. tree | commitdiff
2005-08-22 jprocterregenerated Jpred stubs and tidied client thread. tree | commitdiff
2005-08-17 jprocterSimple Registry Service stubs tree | commitdiff
2005-06-08 amwaterhouseFormatted source tree | commitdiff
2005-06-08 amwaterhouseGPL license added tree | commitdiff
2005-05-22 jprocterAdded alignment ordering option to 'Sort by' and implem... tree | commitdiff
2005-04-28 jprocterFirst try with MuscleWS tree | commitdiff
2005-04-08 jprocterrecent rebuild of the JPred client from WSDL2Java tree | commitdiff
2005-04-06 jprocterNew client code for JPred service includes return of... tree | commitdiff
2005-03-30 jproctercleaned up some comments and exception messages. tree | commitdiff
2005-03-18 jprocterrough JPredService client copied from WebServices project. tree | commitdiff
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