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[jalview.git] / src / jalview / gui / Desktop.java

2021-02-05	Jim Procter	JAL-3811 document SHOW_JWS2_SERVICES user preference...	blob \| commitdiff
2020-09-17	Jim Procter	JAL-3741 http to https (and jar to jvp for exampleFile...	blob \| commitdiff \| diff to current
2020-04-06	Jim Procter	JAL-3407 redact java 8 incompatible type inference	blob \| commitdiff \| diff to current
2020-02-19	Jim Procter	JAL-3187 JAL-2764 close feature settings when parent...	blob \| commitdiff \| diff to current
2020-02-18	Jim Procter	JAl-3187 JAL-3535 JAL-3534 update open feature settings...	blob \| commitdiff \| diff to current
2020-02-17	Jim Procter	JAL-3534 patch for simple case (Protein or Nucleotide...	blob \| commitdiff \| diff to current
2019-06-17	Jim Procter	JAL-3311 remove menus and documentation relating to... tasks/JAL-3311_removeVamsasMenu	blob \| commitdiff \| diff to current
2019-06-14	Jim Procter	JAL-3111 report build type and commit in stdout from...	blob \| commitdiff \| diff to current
2019-05-27	Ben Soares	Merge branch 'task/JAL-3247_JAL-3246_JAL-3254_JAL-3236_...	blob \| commitdiff \| diff to current
2019-05-24	Ben Soares	JAL-3141 Reworked a lot of BackupFiles to allow the...	blob \| commitdiff \| diff to current
2019-05-22	Ben Soares	Merge branch 'bug/JAL-3141_backupfiles_prefs_widget_dis...	blob \| commitdiff \| diff to current
2019-05-21	Ben Soares	JAL-3247 Launcher start improvements. RPM and DEB no...	blob \| commitdiff \| diff to current
2019-04-15	Ben Soares	JAL-3130 Helper classes to take Class Exceptions when...	blob \| commitdiff \| diff to current
2019-04-05	Ben Soares	JAL-3130 This commit concentrates on the Mac OS X DMG...	blob \| commitdiff \| diff to current
2019-04-04	Ben Soares	JAL-3130 trying to be Java 1.8 source compatible -...	blob \| commitdiff \| diff to current
2019-03-20	Ben Soares	JAL-3130 Lots of deprecation fixes. See utils/deprecat...	blob \| commitdiff \| diff to current
2019-03-20	Ben Soares	JAL-3141 Disabled the 'Include Backup Files' checkbox...	blob \| commitdiff \| diff to current
2019-03-19	Ben Soares	JAL-3130 remove some comments on quit. fix modules...	blob \| commitdiff \| diff to current
2019-03-19	Ben Soares	JAL-3130 Merge of JAL-3130_Java_11_investigations-Ben...	blob \| commitdiff \| diff to current
2019-01-30	Ben Soares	JAL-3141 Enabled the 'Include backpup files' checkbox...	blob \| commitdiff \| diff to current
2019-01-25	Ben Soares	JAL-3141. This adds quite a lot of code to allow an...	blob \| commitdiff \| diff to current
2019-01-24	Ben Soares	JAL-3141 Reformatted code in eclipse	blob \| commitdiff \| diff to current
2019-01-20	Ben Soares	JAL-3141 Changed suffix position to after the extension...	blob \| commitdiff \| diff to current
2019-01-18	Jim Procter	Merge branch 'feature/JAL-3063jaxbNoCastor' into featur...	blob \| commitdiff \| diff to current
2019-01-14	Ben Soares	JAL-3141 Added a 'Save Project as...' File menu item...	blob \| commitdiff \| diff to current
2018-12-13	Ben Soares	JAL-3130 Attempting to fix 8 tests that pass on a Mac...	blob \| commitdiff \| diff to current
2018-12-11	Ben Soares	JAL-3130 Turns out Quit/About/Preferences handlers...	blob \| commitdiff \| diff to current
2018-12-06	Ben Soares	JAL-3130 incorporating feature/JAL-3063jaxbNoCastor...	blob \| commitdiff \| diff to current
2018-12-03	gmungoc	JAL-3063 Castor removed from codebase	blob \| commitdiff \| diff to current
2018-12-03	Ben Soares	JAL-3130 Added flagged runtime 'Reflection' check on...	blob \| commitdiff \| diff to current
2018-11-09	Ben Soares	JAL-1988 This fixes the Quit response when user cancels...	blob \| commitdiff \| diff to current
2018-11-08	Ben Soares	JAL-1988 JAL-3130 Now we're in Java 11 land, using...	blob \| commitdiff \| diff to current
2018-11-08	Ben Soares	JAL-1988 tidying, plus don't add Preferences to Tools...	blob \| commitdiff \| diff to current
2018-11-08	Ben Soares	JAL-1988 JAVA 11 enabled version with Quit, Preferences...	blob \| commitdiff \| diff to current
2018-11-05	Ben Soares	JAL-1988 Investigating...	blob \| commitdiff \| diff to current
2018-09-18	gmungoc	JAL-3063 temporary extra menu option to save/load proje...	blob \| commitdiff \| diff to current
2018-09-11	Jim Procter	Merge branch 'develop' into releases/Release_2_11_Branch	blob \| commitdiff \| diff to current
2018-09-06	Jim Procter	JAL-3091 code committed in error (failed patch for...	blob \| commitdiff \| diff to current
2018-09-06	Jim Procter	JAL-3091 release notes for JAL-3104	blob \| commitdiff \| diff to current
2018-06-05	Jim Procter	JAL-3009 news reader thread should be in background... bugs/JAL-3009_blockingNetworkThreads	blob \| commitdiff \| diff to current
2018-06-05	Jim Procter	JAL-3009 Identifiers.Org retrieval on background thread.	blob \| commitdiff \| diff to current
2018-05-28	gmungoc	Merge branch 'bug/JAL-797' into develop	blob \| commitdiff \| diff to current
2018-05-28	gmungoc	Merge remote-tracking branch 'origin/releases/Release_2...	blob \| commitdiff \| diff to current
2018-05-25	Jim Procter	JAL-1460 temp variable for clearer conditional and... bug/JAL-1460_dragndropWindows	blob \| commitdiff \| diff to current
2018-05-25	Jim Procter	JAL-1460 javadoc	blob \| commitdiff \| diff to current
2018-05-24	Jim Procter	JAL-1460 tidied up the use of windows link file parser	blob \| commitdiff \| diff to current
2018-05-24	Jim Procter	JAL-1460 more complete drag'n'drop debugging info and...	blob \| commitdiff \| diff to current
2018-05-24	Jim Procter	JAL-1460 process .lnk files dragged to Jalview when...	blob \| commitdiff \| diff to current
2018-05-24	Jim Procter	JAL-1460 new data flavor for URLs added belt-and-braces...	blob \| commitdiff \| diff to current
2018-05-21	gmungoc	JAL-797 Cmd-W act WHEN_IN_FOCUSED_WINDOW bug/JAL-797	blob \| commitdiff \| diff to current
2018-05-07	gmungoc	Merge branch 'releases/Release_2_10_4_Branch' into...	blob \| commitdiff \| diff to current
2018-04-12	gmungoc	JAL-2944 tidies for review comments	blob \| commitdiff \| diff to current
2018-04-05	Jim Procter	JAL-2944 pull up structure viewer discovery routine...	blob \| commitdiff \| diff to current
2018-03-16	gmungoc	Merge branch 'bug/JAL-2865removeGC' into develop	blob \| commitdiff \| diff to current
2018-02-21	Jim Procter	Merge branch 'bug/JAL-2778again' into releases/Release_...	blob \| commitdiff \| diff to current
2018-02-21	Jim Procter	JAL-2778 reinstate transparent windows to avoid ugly... bug/JAL-2778again	blob \| commitdiff \| diff to current
2018-01-10	gmungoc	JAL-2865 unhelpful System.gc() calls removed bug/JAL-2865removeGC	blob \| commitdiff \| diff to current
2018-01-10	kiramt	JAL-797: Added keybindings so that ctrl- or cmd-W close...	blob \| commitdiff \| diff to current
2017-11-07	gmungoc	JAL-2069 update spike branch with latest	blob \| commitdiff \| diff to current
2017-11-01	kiramt	JAL-2778 added setopaque again, and super.paintComponent(s)	blob \| commitdiff \| diff to current
2017-10-31	kiramt	JAL-2756 update for new EBI https link	blob \| commitdiff \| diff to current
2017-10-27	gmungoc	JAL-1793 spike branch updated to latest	blob \| commitdiff \| diff to current
2017-10-25	Jim Procter	JAL-2779 remove empty block and if statement	blob \| commitdiff \| diff to current
2017-10-20	Jim Procter	JAL-2779 keep a reference to original Aqua manager...	blob \| commitdiff \| diff to current
2017-10-18	Jim Procter	JAL-2779 switch order for updating the current alignmen...	blob \| commitdiff \| diff to current
2017-10-18	Jim Procter	JAL-2779 remove dead code	blob \| commitdiff \| diff to current
2017-10-18	Jim Procter	JAL-2779 hook in our own AquaInternalFrameManager when...	blob \| commitdiff \| diff to current
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-09-15	Jim Procter	JAL-1625 ensure we don’t regress on JAL-20 - we always... patch/JAL-2732	blob \| commitdiff \| diff to current
2017-09-15	Jim Procter	JAL-2733 redraw after changing the memory status displa...	blob \| commitdiff \| diff to current
2017-09-15	Jim Procter	JAL-1625 JAL-1900 preserve the original DesktopManager...	blob \| commitdiff \| diff to current
2017-09-15	Jim Procter	JAL-1900 JAL-1625 back out OSX specific double buffer...	blob \| commitdiff \| diff to current
2017-09-15	Jim Procter	JAL-1551 standard code formatting	blob \| commitdiff \| diff to current
2017-09-15	Jim Procter	JAL-2732 force a redraw after resize/drag to clear...	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-06-02	tcofoegbu	JAL-2473 revised default minimum dimension for Alignmen...	blob \| commitdiff \| diff to current
2017-05-29	Jim Procter	Merge branch 'bug/JAL-2536' into develop	blob \| commitdiff \| diff to current
2017-05-29	Jim Procter	JAL-2536 tweak javadoc wording	blob \| commitdiff \| diff to current
2017-05-17	Jim Procter	Merge branch 'features/JAL-2447experimentalFlag' into...	blob \| commitdiff \| diff to current
2017-05-16	kiramt	JAL-2536 Overview window sizing not subject to min... bug/JAL-2536	blob \| commitdiff \| diff to current
2017-05-02	gmungoc	JAL-2447 EXPERIMENTAL preference (option in Tools menu) features/JAL-2447experimentalFlag	blob \| commitdiff \| diff to current
2017-04-10	tcofoegbu	JAL-2473 added improvement to apply default / custom...	blob \| commitdiff \| diff to current
2017-03-24	kiramt	JAL-2314 Tidy up	blob \| commitdiff \| diff to current
2017-03-23	kiramt	JAL-2314 Tweaks to stop thread sync issues	blob \| commitdiff \| diff to current
2017-03-23	kiramt	JAL-2314 Tidies	blob \| commitdiff \| diff to current
2017-01-26	kiramt	Merge remote-tracking branch 'origin/develop' into...	blob \| commitdiff \| diff to current
2017-01-25	gmungoc	JAL-2344 push Cache.getProperty("LAST_DIRECTORY") insid...	blob \| commitdiff \| diff to current
2017-01-12	gmungoc	JAL-2344 now flagging formats as 'identifiable' instead...	blob \| commitdiff \| diff to current
2017-01-11	gmungoc	JAL-2344 FileFormats singleton for formats, FileFormatI...	blob \| commitdiff \| diff to current
2016-12-15	kiramt	JAL-2316 Changes following review.	blob \| commitdiff \| diff to current
2016-12-13	kiramt	Merge branch 'develop' into features/JAL-2316	blob \| commitdiff \| diff to current
2016-12-08	gmungoc	JAL-2359 add Window menu entry only after all danger...	blob \| commitdiff \| diff to current
2016-12-07	gmungoc	JAL-2344 handle null format, simplify JalviewFileChoose...	blob \| commitdiff \| diff to current
2016-12-07	kiramt	JAL-2316 Restructure identifiers.org download	blob \| commitdiff \| diff to current
2016-12-05	kiramt	JAL-2316 Adjusted unit tests. Tidied UrlLinkProviderI...	blob \| commitdiff \| diff to current
2016-11-28	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2016-11-25	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2016-11-25	gmungoc	JAL-2344 use .equals() to compare FileFormatI objects	blob \| commitdiff \| diff to current
2016-11-24	tcofoegbu	JAL-2326 updated references of JOptionPane to JvOptionPane	blob \| commitdiff \| diff to current
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