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[jalview.git] / src / jalview / gui / StructureChooser.java

2022-07-15	Ben Soares	JAL-4034 Use the new non-modal JDialog for 3DBeacons...	blob \| commitdiff
2022-07-12	Ben Soares	JAL-4034 change to jalview property name	blob \| commitdiff \| diff to current
2022-07-12	Ben Soares	JAL-4034 showConfirmDialog works for both desktop and...	blob \| commitdiff \| diff to current
2022-07-11	Ben Soares	JAL-4034 Non-blocking 3D Beacons query after warning...	blob \| commitdiff \| diff to current
2022-07-11	Ben Soares	JAL-4034 allow a jalview_property to set the threshold...	blob \| commitdiff \| diff to current
2022-07-04	Jim Procter	JAL-4034 fix #3 change uniprot ref fetch dialog to...	blob \| commitdiff \| diff to current
2022-07-04	Jim Procter	JAL-4034 Fix #2 show an icon and a button to press...	blob \| commitdiff \| diff to current
2022-03-08	Jim Procter	JAL-3438 spotless for 2.11.2.0	blob \| commitdiff \| diff to current
2022-02-11	Ben Soares	JAL-3949 Complete new abstracted logging framework...	blob \| commitdiff \| diff to current
2021-11-05	Jim Procter	JAL-3875 fully reset filter combo-box when fetch 3d...	blob \| commitdiff \| diff to current
2021-11-02	Jim Procter	JAL-3875 test case and patch to verify the query 3d...	blob \| commitdiff \| diff to current
2021-10-01	Jim Procter	JAL-3829 fetch 3D beacons now started by clicking butto...	blob \| commitdiff \| diff to current
2021-10-01	Jim Procter	Merge branch 'develop' into features/r2_11_2/JAL-3829_3...	blob \| commitdiff \| diff to current
2021-09-29	Jim Procter	JAL-3829 report when 3d-beacons doesn’t provide any...	blob \| commitdiff \| diff to current
2021-09-24	Jim Procter	JAL-3829 open web page for 3d beacons structure by... features/r2_11_2/JAL-3829_3dbeacons	blob \| commitdiff \| diff to current
2021-09-24	Jim Procter	JAL-3829 right click to view popup menu to show link...	blob \| commitdiff \| diff to current
2021-09-21	Ben Soares	JAL-3691 automatic insertion of Locale.ROOT to toUpperC...	blob \| commitdiff \| diff to current
2021-09-21	Jim Procter	JAL-3829 - callback finessing - leave DBRefFetcher...	blob \| commitdiff \| diff to current
2021-09-21	Jim Procter	JAL-3829 alternative UX: need to select 3d-beacons...	blob \| commitdiff \| diff to current
2021-09-20	Jim Procter	JAL-3829 tests need to wait for dialog to be closed...	blob \| commitdiff \| diff to current
2021-09-20	Jim Procter	JAL-3829 do better at detecting structure type, prompt...	blob \| commitdiff \| diff to current
2021-09-13	Jim Procter	JAL-3829 select single best TDB structure and select...	blob \| commitdiff \| diff to current
2021-09-10	Jim Procter	JAL-3829 provide both PDBe queries and 3D-Beacons queri...	blob \| commitdiff \| diff to current
2021-09-08	Jim Procter	JAL-3829 allow client-side selection of structures...	blob \| commitdiff \| diff to current
2021-09-03	Jim Procter	JAL-3829 comments on the 3D structure chooser’s initial...	blob \| commitdiff \| diff to current
2021-09-03	Jim Procter	JAL-3829 JAL-3865 StructureChooserQuerySource implement...	blob \| commitdiff \| diff to current
2021-09-03	Jim Procter	JAL-3829 refactored FilterOption provider to the Struct...	blob \| commitdiff \| diff to current
2021-08-30	Jim Procter	JAL-3829 3d-beacons structure chooser logic (not yet...	blob \| commitdiff \| diff to current
2021-08-30	Jim Procter	JAL-3829 pulled out more of the FTS dependent parts...	blob \| commitdiff \| diff to current
2021-08-30	Jim Procter	JAL-3829 pushed the PDBFTSClient specific code to new...	blob \| commitdiff \| diff to current
2019-07-16	gmungoc	JAL-3210 Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2019-06-04	gmungoc	JAL-2386 avoid duplicate pdbids in free text query bug/JAL-3286duplicatePdbQuery	blob \| commitdiff \| diff to current
2019-01-26	hansonr	Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -...	blob \| commitdiff \| diff to current
2019-01-11	hansonr	JS optimization for too aggressive dynamic operation...	blob \| commitdiff \| diff to current
2018-06-28	Jim Procter	JAL-3048 TODOs for refactoring JalviewFileChooser pattern	blob \| commitdiff \| diff to current
2018-04-12	gmungoc	JAL-2944 tidies for review comments	blob \| commitdiff \| diff to current
2018-04-09	Jim Procter	JAL-2944 ’new view’ and ‘add to view’ button rather...	blob \| commitdiff \| diff to current
2018-04-09	Jim Procter	JAL-1847 superpose checkbox in structure chooser	blob \| commitdiff \| diff to current
2018-04-05	Jim Procter	JAL-2944 open selected structures in existing or a...	blob \| commitdiff \| diff to current
2018-02-07	Jim Procter	JAL-2902 thread off dialog close op to avoid deadlock...	blob \| commitdiff \| diff to current
2018-02-07	Jim Procter	JAL-2780 JAL-2781 JAL-2902 refactor ‘OK’ action to...	blob \| commitdiff \| diff to current
2018-02-05	Jim Procter	JAL-2780 JAL-2781 programmatically select structures...	blob \| commitdiff \| diff to current
2018-02-05	Jim Procter	JAL-2780 JAL-2871 only look up current table view once	blob \| commitdiff \| diff to current
2018-01-30	gmungoc	JAL-1793 update spike build to latest incl stop and...	blob \| commitdiff \| diff to current
2018-01-18	gmungoc	JAL-2810 JAL-2886 i18n	blob \| commitdiff \| diff to current
2017-11-22	gmungoc	JAL-2069 spike updated with latest (FeatureTypeSettings)	blob \| commitdiff \| diff to current
2017-11-17	Jim Procter	JAL-2698 Cached PDB Entries -> Cached Structures in...	blob \| commitdiff \| diff to current
2017-11-15	gmungoc	JAL-2835 spike updated with latest	blob \| commitdiff \| diff to current
2017-11-08	Jim Procter	Merge branch 'develop' into bug/JAL-2225mapMultipleChains	blob \| commitdiff \| diff to current
2017-10-27	gmungoc	JAL-1793 spike branch updated to latest	blob \| commitdiff \| diff to current
2017-10-10	Jim Procter	Merge branch 'codereviews/JAL-1990_IProgressIndicator_j...	blob \| commitdiff \| diff to current
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-09-05	gmungoc	JAL-2225 fix bug in collating unique pdb files and...	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-05-01	tcofoegbu	JAL-2376 copied out patch from Phyre branch	blob \| commitdiff \| diff to current
2016-11-28	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2016-11-25	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2016-11-24	tcofoegbu	JAL-2326 updated references of JOptionPane to JvOptionPane	blob \| commitdiff \| diff to current
2016-11-21	tcofoegbu	JAL-2332 bugfix to enable structure chooser opening...	blob \| commitdiff \| diff to current
2016-10-25	Jim Procter	JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch	blob \| commitdiff \| diff to current
2016-10-24	Jim Procter	Merge branch 'releases/Release_2_10_0_Branch'	blob \| commitdiff \| diff to current
2016-10-11	tcofoegbu	JAL-2039 improvement to offer cached structure view... features/JAL-2039_Offer_cached_structurefiles_immediately	blob \| commitdiff \| diff to current
2016-10-06	Jim Procter	JAL-2089 Merge branch releases/Release_2_10_Branch...	blob \| commitdiff \| diff to current
2016-10-05	Jim Procter	JAL-2189 source formatting	blob \| commitdiff \| diff to current
2016-09-29	gmungoc	JAL-2237 apply default filter as sort in initial search	blob \| commitdiff \| diff to current
2016-09-27	gmungoc	JAL-2231 save preferred scroll height _without_ progres...	blob \| commitdiff \| diff to current
2016-09-01	Jim Procter	JAL-1803 JAL-2188 experimental:	blob \| commitdiff \| diff to current
2016-08-24	Jim Procter	JAL-2106 removed setSourceDBRef, refactor getSourceDBRe...	blob \| commitdiff \| diff to current
2016-07-12	gmungoc	FileFormat enum wip changes	blob \| commitdiff \| diff to current
2016-07-11	gmungoc	file format enum wip changes	blob \| commitdiff \| diff to current
2016-06-30	tcofoegbu	JAL-2074 Improvement to StructureChooser and FTS interf...	blob \| commitdiff \| diff to current
2016-06-24	tcofoegbu	JAL-1960 updated unit test to include the test case...	blob \| commitdiff \| diff to current
2016-06-20	tcofoegbu	JAL-1823 Deleted two obsolete methods in PopupMenu...	blob \| commitdiff \| diff to current
2016-06-15	tcofoegbu	Merge branch 'develop' of https://source.jalview.org...	blob \| commitdiff \| diff to current
2016-06-15	tcofoegbu	JAL-2002 disabled 'Best Uniport Coverage' filter. JAL...	blob \| commitdiff \| diff to current
2016-06-15	gmungoc	JAL-2025 unit tests added	blob \| commitdiff \| diff to current
2016-06-14	tcofoegbu	JAL-2047 resolved structure chooser's displayed column...	blob \| commitdiff \| diff to current
2016-06-08	tcofoegbu	JAL-1479 JAL- Fix to eradicate duplicate mapping output...	blob \| commitdiff \| diff to current
2016-06-06	tcofoegbu	JAL-1919, JAL-1960 fix to disable refetching dbrefs...	blob \| commitdiff \| diff to current
2016-05-27	tcofoegbu	merge	blob \| commitdiff \| diff to current
2016-05-27	tcofoegbu	JAL-1823 improvement to all chain code specification...	blob \| commitdiff \| diff to current
2016-05-27	gmungoc	JAL-1942 small tidy (formatting, explict imports, typed...	blob \| commitdiff \| diff to current
2016-04-22	tcofoegbu	JAL-2071 further refactoring, optimisation, and house...	blob \| commitdiff \| diff to current
2016-04-19	tcofoegbu	JAL-2071 architectural improvement for Plugable Free...	blob \| commitdiff \| diff to current
2016-04-06	tcofoegbu	JAL-1960 updated test to capture new behaviour improvement	blob \| commitdiff \| diff to current
2016-04-01	tcofoegbu	JAL-2045 JAL-2047 improvement for sorting PDB quality...	blob \| commitdiff \| diff to current
2016-03-22	tcofoegbu	JAL-1919 code improvement to make PDB sequence fetcher...	blob \| commitdiff \| diff to current
2016-03-11	tcofoegbu	JAL-2026 Bug fix for best quality filter	blob \| commitdiff \| diff to current
2016-03-10	tcofoegbu	JAL-2025 added code to stanitise query for structure...	blob \| commitdiff \| diff to current
2016-03-10	tcofoegbu	JAL-2024 code to enforce case insensitivity for manual...	blob \| commitdiff \| diff to current
2016-02-23	tcofoegbu	JAL-1720 renamed Structure Chooser filters according...	blob \| commitdiff \| diff to current
2016-02-22	tcofoegbu	JAL-1720 JAL-2002 improvement for 'uniprot coverage...	blob \| commitdiff \| diff to current
2016-01-11	tcofoegbu	JAL-1990 added a progress indicator for Structure Choos...	blob \| commitdiff \| diff to current
2015-11-25	tcofoegbu	JAL-1479 refactored DBRef fetching code to StructureCho...	blob \| commitdiff \| diff to current
2015-11-25	tcofoegbu	JAL-1479 applet build debug	blob \| commitdiff \| diff to current
2015-11-10	tcofoegbu	JAL 1960 added code to restrict structure chooser to...	blob \| commitdiff \| diff to current
2015-10-15	tcofoegbu	JAL-1479 refactored SequenceI interface - changed getDB...	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	JAL-1894 update year/version in copyright	blob \| commitdiff \| diff to current
2015-09-24	tcofoegbu	JAL-1860 keyboard operation of pdb sequence fetcher...	blob \| commitdiff \| diff to current
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