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JAL-3725 helper methods for computing mapped feature range overlap
[jalview.git]
/
src
/
jalview
/
util
/
MappingUtils.java
2020-10-28
gmungoc
JAL-3725 helper methods for computing mapped feature...
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2020-09-16
gmungoc
JAL-3700 fix for propagation of sort commands
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2020-09-16
gmungoc
JAL-3700 check for 'covering' mapping when matching...
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2020-08-03
gmungoc
JAL-3692 EMBL flatfile fetcher / parser (todo: CDS...
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2018-03-07
Jim Procter
Merge branch 'releases/Release_2_10_4_Branch' into...
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2017-11-08
kiramt
Merge branch 'develop' into feature/JAL-2759
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2017-10-27
gmungoc
JAL-1793 spike branch updated to latest
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2017-10-26
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
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2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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2017-09-27
kiramt
JAL-2674 Removing most calls to getHiddenColumnsCopy
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2017-09-22
gmungoc
JAL-2738 extract utility method to MappingUtils
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2017-09-01
gmungoc
JAL-2617 omit stop codon from synthesized CDS sequence
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2017-08-16
Jim Procter
JAL-2418 source formatting
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2017-07-24
gmungoc
spike branch updated from latest features/JAL-2446
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2017-06-09
gmungoc
JAL-2446 merged to spike branch
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2017-06-08
kiramt
JAL-2591 Refactor HiddenColumns to use ArrayList instea...
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2017-06-08
kiramt
JAL-2591 More HiddenColumns refactoring. Tests passing.
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2017-06-07
kiramt
JAL-2591 simplifying hidden columns usage
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2017-04-25
kiramt
JAL-2388 Working hidden regions hide/show in desktop
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2017-04-24
kiramt
JAL-2388 Finished split of hidden columns and selected...
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2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
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2017-01-04
gmungoc
JAL-2371 CollectionColourScheme wraps ColourSchemeI
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2016-10-28
Jim Procter
JAL-966 JAL-1738 JAL-345 interfaces for SearchResults...
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2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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2016-10-05
Jim Procter
JAL-2189 source formatting
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2016-09-06
gmungoc
JAL-2147 additional test coverage for findMappingsForSe...
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2016-07-14
Jim Procter
JAL-2147 findMappingsBetweenSequenceAndOthers for scopi...
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2016-04-01
gmungoc
JAL-1705 generalised getLength() to handle [start1...
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2016-03-21
gmungoc
JAL-2029 many-to-many EnsemblCDS-to-Uniprot mappings
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2016-03-03
gmungoc
JAL-1705 include stop codons in derived CDS; support...
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2016-03-01
gmungoc
JAL-1705 align CDS and peptide products to transcripts
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2016-02-19
gmungoc
JAL-1705 helper method for mapping excluding stop codon
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2016-01-28
gmungoc
Merge branch 'develop' into JAL-1705_trialMerge
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2016-01-11
gmungoc
JAL-1989 map hidden column ranges
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2015-12-22
gmungoc
JAL-653 AlignedCodonFrame collections changed from...
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2015-12-03
gmungoc
JAL-653 handle reverse strand mappings also
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2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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2015-09-10
Jim Procter
JAL-1645 licencing for new files in src
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2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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2015-05-05
gmungoc
JAL-1725 first version of Jetty server / chimera select...
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2015-04-23
gmungoc
JAL-845 only 'follow' sort command in coding complement...
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2015-04-08
gmungoc
JAL-1691 applet SplitFrame scrolling; pull up of 5...
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2015-04-07
gmungoc
JAL-1691 linked scrollling in split frame (Desktop)
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2015-04-01
gmungoc
JAL-845 fixed start/end range of a mapped SequenceGroup
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2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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git://source.jalview.org / jalview.git / history