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JAL-4046 release notes for JAL-4014 - gecos colourschemes
[jalview.git] / src /
2022-08-08 Jim ProcterMerge branch 'improvement/JAL-4014_gecos_colour_schemes... tree | commitdiff
2022-08-08 Jim ProcterMerge branch 'patch/JAL-4036_uniprot_fts_legacy_endpoin... tree | commitdiff
2022-08-08 Jim ProcterJAL-4034 show the loading spinner when switching betwee... tree | commitdiff
2022-08-08 Jim ProcterMerge branch 'features/JAL-4034_improve_3dbeacons_butto... tree | commitdiff
2022-07-25 Ben SoaresJAL-4036 moved a comment block tree | commitdiff
2022-07-25 Ben SoaresJAL-4034 button looks better also on other OSes with... tree | commitdiff
2022-07-24 Ben SoaresJAL-4034 add round corners to 3DB confirmation button... tree | commitdiff
2022-07-22 Ben SoaresJAL-4036 Changes made from code review CR-JAL-265 tree | commitdiff
2022-07-22 Ben SoaresJAL-4036 Add getDbName to the GFTSPanelI and add an... tree | commitdiff
2022-07-22 Ben SoaresJAL-4036 removing the query field code from the dropdow... tree | commitdiff
2022-07-21 Ben SoaresJAL-4036 Don't autosearch changing index when autosearc... tree | commitdiff
2022-07-21 Ben SoaresJAL-4036 add search fieldname to dropdown list tree | commitdiff
2022-07-21 Ben SoaresJAL-4036 New configuration, target and pagination proce... tree | commitdiff
2022-07-20 Jim ProcterJAL-4045 - don't apply distribution dependent scale... tree | commitdiff
2022-07-15 Ben SoaresJAL-4034 Use the new non-modal JDialog for 3DBeacons... tree | commitdiff
2022-07-15 Ben SoaresJAL-4034 Allow request for non-modal JDialog, which... tree | commitdiff
2022-07-12 Ben SoaresJAL-4034 change to jalview property name tree | commitdiff
2022-07-12 Ben SoaresJAL-4034 showConfirmDialog works for both desktop and... tree | commitdiff
2022-07-11 Ben SoaresJAL-4034 Non-blocking 3D Beacons query after warning... tree | commitdiff
2022-07-11 Ben SoaresJAL-4034 allow a jalview_property to set the threshold... tree | commitdiff
2022-07-04 Jim ProcterJAL-4034 fix #3 change uniprot ref fetch dialog to... tree | commitdiff
2022-07-04 Jim ProcterJAL-4034 Fix #2 show an icon and a button to press... tree | commitdiff
2022-06-30 Jim ProcterJAL-4036 use the legacy endpoint (and report the FTS... tree | commitdiff
2022-06-28 Ben SoaresMerge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS... tree | commitdiff
2022-06-28 Ben SoaresJAL-1988 Don't put Quit in the File menu if there's... tree | commitdiff
2022-06-23 Ben SoaresMerge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS... tree | commitdiff
2022-06-23 Ben SoaresJAL-1988 Check for setHandler capability to avoid About... tree | commitdiff
2022-06-17 Ben SoaresJAL-3027 Avoid FlatLAF Desktop class is JalviewJS tree | commitdiff
2022-06-15 Jim ProcterJAL-1988 JAL-3416 avoid unnecessary static flag tree | commitdiff
2022-06-15 Jim ProcterJAL-3418 JAL-1988 don’t need java version check anymore tree | commitdiff
2022-06-13 Ben SoaresJAL-1988 Hack to ensure Quit dialog box is moved to... tree | commitdiff
2022-06-13 Ben SoaresJAL-1988 Moved APQHandlers to jalview.jbgui and called... tree | commitdiff
2022-06-13 Jim ProcterMerge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS... tree | commitdiff
2022-06-13 Ben SoaresJAL-3416 remove flat as default for linux tree | commitdiff
2022-06-13 Ben SoaresJAL-1988 JAL-3416 Using the flatlaf-extras About, Prefe... tree | commitdiff
2022-06-13 Ben SoaresJAL-3416 Added some mac specific FlatLAF settings.... tree | commitdiff
2022-06-09 Jim ProcterMerge branch 'bug/JAL-4020_add_pymolwin_paths' into... tree | commitdiff
2022-06-09 Jim ProcterJAL-4026 ignore StructureSelectionManager events if... tree | commitdiff
2022-06-09 Jim ProcterJAL-4026 update the viewport’s wrapped width after... tree | commitdiff
2022-06-08 Jim ProcterMerge branch 'improvement/JAL-4023_snotation_for_trees... tree | commitdiff
2022-06-08 Jim ProcterMerge branch 'patch/JAL-4024_jumpScrollHang' into develop tree | commitdiff
2022-06-08 Jim ProcterJAL-4024 only render partially when new view overlaps... patch/JAL-4024_jumpScrollHang tree | commitdiff
2022-06-07 Ben SoaresJAL-4020 class formatting tree | commitdiff
2022-06-07 Ben SoaresJAL-4020 added the \Scripts\pymol.exe. to the pathList tree | commitdiff
2022-06-06 Ben SoaresJAL-4020 Added the +2 arg for PyMOLWin.exe allowing... tree | commitdiff
2022-06-06 Ben SoaresJAL-4020 class reformatting tree | commitdiff
2022-06-06 Ben SoaresJAL-4020 Added path search for global installation... tree | commitdiff
2022-06-06 Jim ProcterJAL-4023 use %g for distances (scientific notation... improvement/JAL-4023_snotation_for_trees tree | commitdiff
2022-06-06 Ben SoaresJAL-4020 Added search for PyMOLWinWithConsole.bat ... tree | commitdiff
2022-06-06 Jim ProcterJAL-4023 store distances as doubles tree | commitdiff
2022-05-12 Ben SoaresJAL-4014 4 gecos colour schemes added tree | commitdiff
2022-04-21 Ben SoaresMerge branch 'develop' into merge/JAL-3978+JAL-3553... tree | commitdiff
2022-04-19 Jim ProcterMerge branch 'bug/JAL-3997_NPE_in_wrapped_mode' into... tree | commitdiff
2022-04-18 Jim ProcterJAL-3997 check for tooltip being null before checking... bug/JAL-3997_NPE_in_wrapped_mode tree | commitdiff
2022-04-16 Jim ProcterJAL-3365 expand range of allowed DSSP secondary structu... tree | commitdiff
2022-04-05 Jim ProcterJAL-3981 patch tests and remove errant imports tree | commitdiff
2022-04-05 Jim ProcterJAL-3990 gradle spotlessApply tree | commitdiff
2022-04-05 Jim ProcterMerge branch 'bug/JAL-3980_JAL-3981_tooltips_sequence_d... tree | commitdiff
2022-03-31 Ben SoaresMerge branch 'develop' into improvement/JAL-3978_add_gr... tree | commitdiff
2022-03-31 Jim ProcterJAL-3985 formatting tree | commitdiff
2022-03-31 Jim ProcterJAL-3985 split PDB id queries into multiple queries... tree | commitdiff
2022-03-30 Jim ProcterMerge branch 'patch/JAL-3976_3dbeaconsnull' into develop tree | commitdiff
2022-03-30 Jim ProcterJAL-360 JAL-3975 update parent for text colour dialog... tree | commitdiff
2022-03-30 Ben SoaresJAL-360 JAL-3975 make AlignFrame the parent of FeatureE... tree | commitdiff
2022-03-25 Jim ProcterJAL-3980 JAL-3979 TODOs bug/JAL-3980_JAL-3981_tooltips_sequence_details tree | commitdiff
2022-03-25 Jim ProcterJAL-3980 defensive copy - inefficient but fixes bug tree | commitdiff
2022-03-25 Jim ProcterJAL-3981 Additional line breaks - sort of helps tree | commitdiff
2022-03-24 Jim ProcterJAL-3981 strategic newlines to help speed up Java's... tree | commitdiff
2022-03-23 Jim ProcterJAL-3976 skip entries with null values when analyzing tree | commitdiff
2022-03-18 Ben SoaresJAL-3978 Using getdowninstanceappdir and getdowninstanc... tree | commitdiff
2022-03-18 Ben SoaresJAL-3978 New tasks to build archive 'old' dir with... tree | commitdiff
2022-03-08 Jim ProcterJAL-3746 apply copyright to source tree | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 tree | commitdiff
2022-03-08 Jim ProcterJAL-3108 updated Ensembl client and model species names tree | commitdiff
2022-03-08 Ben SoaresJAL-3103 Removed code and unused widgets for defaultBrowser tree | commitdiff
2022-03-08 Ben SoaresJAL-3103 Remove BrowserLauncher2 and use Desktop.browse... tree | commitdiff
2022-03-08 Ben SoaresJAL-3103 Put jalview.jar first in getdown for .properti... tree | commitdiff
2022-03-07 Ben SoaresJAL-3103 Switched to (a wrapper around) BrowserLauncher2 tree | commitdiff
2022-03-04 Jim ProcterJAL-3746 JAL-3811 document SHOW_JWS2_SERVICES user... tree | commitdiff
2022-03-04 Jim ProcterJAL-3746 JAL-3812 new argument ‘-nohtmltemplates’ and... tree | commitdiff
2022-03-04 Jim ProcterJAL-3746 JAL-3813 NOIDENTIFIERSSERVICE preference disab... tree | commitdiff
2022-03-04 Jim ProcterJAL-3746 JAL-3814 don’t automatically launch the news... tree | commitdiff
2022-03-04 Jim ProcterJAL-3746 JAL-3814 NONEWS property tree | commitdiff
2022-03-02 Jim ProcterMerge branch 'benreview/JAL-3691_for_2_11_2_getdownrebu... tree | commitdiff
2022-03-02 Jim ProcterJAL-3619 fix up error messages and try to bail quietly... tree | commitdiff
2022-03-02 Jim ProcterJAL-3619 fix up warning message and minimal patch to... tree | commitdiff
2022-02-17 Jim ProcterJAL-3959 add key retrieval urls that support CORS neede... tree | commitdiff
2022-02-17 Jim ProcterJAL-3691 patch toUpper/toLower to use Locale.ROOT for... tree | commitdiff
2022-02-16 Jim ProcterJAL-3551 - wrap pair_fit with undo_disable and undo_enable tree | commitdiff
2022-02-16 Jim ProcterJAL-3837 GPL license on splashscreen (finally !) and... tree | commitdiff
2022-02-16 Jim ProcterJAL-3949 report Pymol XMLRPC port via log.info tree | commitdiff
2022-02-15 Jim ProcterJAL-1761 backbone type parameter for configuring which... tree | commitdiff
2022-02-15 Jim ProcterJAL-1761 need to pass molecule type when generating... tree | commitdiff
2022-02-15 Jim ProcterJAL-3906 use indicate to highlight current mousedOver... tree | commitdiff
2022-02-14 Jim ProcterMerge branch 'task/r_2_11_2/JAL-3956_alphaFill_authorit... tree | commitdiff
2022-02-14 Jim ProcterJAL-3551 tree | commitdiff
2022-02-14 Jim ProcterJAL-3956 - PDBEntry objects constructed from 3D-Beacons... tree | commitdiff
2022-02-11 Jim ProcterMerge branch 'update/JAL-3949_jalview_bin_Console_to_cu... tree | commitdiff
2022-02-11 Jim ProcterJAL-3931 fix - escape % symbols after urlencoding tree | commitdiff
2022-02-11 Ben SoaresMerge branch 'update/JAL-3949_jalview_bin_Console_to_cu... tree | commitdiff
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