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JAL-3248 Added step to create the eclipse files before project import. Noted non...
[jalview.git] / test /
2020-10-20 Jim ProcterJAL-3765 fix test bug/JAL-3765_Find_bugs_in_21112 tree | commitdiff
2020-10-19 Jim ProcterJAL-3765 simple test that findAll finds all matches... tree | commitdiff
2020-09-02 Ben SoaresJAL-3280 Test for remote release build_properties file... tree | commitdiff
2020-08-27 Ben SoaresMerge branch 'releases/Release_2_11_1_Branch' into... merge/JAL_1842+JAL-3509+releases_Release_2_11_1_Branch tree | commitdiff
2020-08-21 Jim ProcterJAL-3675 2.11.1.1 java 8 compatible patch for JAL-3615... tree | commitdiff
2020-08-18 gmungocJAL-3692 parse multiline CDS location correctly tree | commitdiff
2020-08-17 Jim ProcterMerge branch 'patch/JAL-3561_JAL-3660_fileformatexport_... tree | commitdiff
2020-08-17 Jim ProcterMerge branch 'patch/Release_2_11_1_Branch_patch_JAL... tree | commitdiff
2020-08-13 Ben SoaresJAL-3597 Increased heap passmark to <= 45MB and report... tree | commitdiff
2020-08-13 gmungocJAL-3597 slight tidying of code and Javadoc, passmark... tree | commitdiff
2020-08-13 gmungocJAL-3597 additional references nulled, bug in test... tree | commitdiff
2020-08-10 gmungocJAL-3490 match count independent of contiguous matches... patch/Release_2_11_1_Branch_patch_JAL-3490 tree | commitdiff
2020-08-05 Jim ProcterJAL-3628 init log after loading testProps for each... tree | commitdiff
2020-08-05 gmungocJAL-3692 unit test updated for ?gzip download endpoint URL patch/JAL-3692enaEndpointFlatfile tree | commitdiff
2020-08-05 gmungocJAL-3692 parse multiline feature qualifiers and escaped... tree | commitdiff
2020-08-03 Jim ProcterJAL-3692 fix up test for 2.11.1 series datamodel API tree | commitdiff
2020-08-03 gmungocJAL-3692 set CDS /product as EMBLCDSPROTEIN description tree | commitdiff
2020-08-03 gmungocJAL-3692 refactor/complete parsing, more unit test... tree | commitdiff
2020-08-03 gmungocJAL-3692 parse DE for description, and other refactoring... tree | commitdiff
2020-08-03 gmungocJAL-3692 URL tests updated tree | commitdiff
2020-08-03 gmungocJAL-3692 unit test (J03321), fixes, dbrefs; todo: prote... tree | commitdiff
2020-08-03 gmungocJAL-3692 EMBL flatfile fetcher / parser (todo: CDS... tree | commitdiff
2020-07-31 Ben SoaresMerge branch 'releases/Release_2_11_1_Branch' into... tree | commitdiff
2020-07-28 Jim ProcterJAL-3615 update tests for Rfam/Pfam specific gzip endpoints tree | commitdiff
2020-07-27 gmungocJAL-2656 JAL-3615 check response headers to test for... tree | commitdiff
2020-07-27 gmungocJAL-3615 used gzip endpoints for Pfam and Rfam tree | commitdiff
2020-07-27 gmungocJAL-3621 corrected sequence feature sort and test tree | commitdiff
2020-06-29 Jim ProcterJAL-3493 failing test - creates a highlight and column... tree | commitdiff
2020-06-29 Jim ProcterMerge branch 'bug/JAL-3490findSpanHiddenGaps' into... tree | commitdiff
2020-06-16 Jim ProcterMerge branch 'bug/JAL-3561_translatefileformats' into... patch/JAL-3561_JAL-3660_fileformatexport_CLI tree | commitdiff
2020-06-16 Jim ProcterJAL-3561 JAL-3660 check resolved FileFormatI instances... tree | commitdiff
2020-05-01 gmungocJAL-3613 check sequence overlap when matching search... tree | commitdiff
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati... tree | commitdiff
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3567virtualFeatureCoordinates... tree | commitdiff
2020-04-21 Jim ProcterJAL-3567 translated rather than imputed peptide tree | commitdiff
2020-04-17 gmungocJAL-3567 unit tests for linked feature tooltips tree | commitdiff
2020-04-16 gmungocJAL-3567 adjust layout of linked feature report, unit... tree | commitdiff
2020-04-16 gmungocJAL-3567 report mapped location for virtual features... tree | commitdiff
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into... tree | commitdiff
2020-04-14 Jim ProcterJAL-3529 revert ordering of DBRef addition so it reflec... tree | commitdiff
2020-04-14 Jim ProcterJAL-3597 improved Memory test suite by detecting base... tree | commitdiff
2020-04-13 gmungocJAL-3574 test coverage corners bug/JAL-3574filterByPOS tree | commitdiff
2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e... tree | commitdiff
2020-03-31 gmungocJAL-1889 better (?) wait for Conservation thread tree | commitdiff
2020-03-20 Jim ProcterJAL-3562 exclude testNG groups from a build via -Ptestn... tree | commitdiff
2020-03-20 Jim ProcterJAL-3561 failing test verifying expected fileformat... tree | commitdiff
2020-03-09 gmungocJAL-3528 unit tests added for failed lookup, Javadoc tree | commitdiff
2020-03-06 gmungocJAL-3187 unit test for findComplementFeaturesAtResidue tree | commitdiff
2020-03-06 gmungocMerge branch 'feature/JAL-3468featureDescriptionEllipsi... tree | commitdiff
2020-03-06 gmungocJAL-3468 i18n and additional unit tests feature/JAL-3468featureDescriptionEllipsis tree | commitdiff
2020-03-06 Ben SoaresJAL-3529 improved regex in Stockholm UNIPROT accession... tree | commitdiff
2020-03-04 Ben SoaresJAL-3468 Fixed tests and added test for max-length... tree | commitdiff
2020-02-27 Jim ProcterJAL-3412 patch for failing test tree | commitdiff
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3412idWidthDiscrepancy' into... bug/JAL-3412idWidthDiscrepancy tree | commitdiff
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3296changeStartInvalidateCursor... tree | commitdiff
2020-02-18 Ben SoaresJAL-3449 merge from develop tree | commitdiff
2020-02-18 Jim ProcterJAL-3529 test for AC <Uniprot/EMBL> rather than DR... tree | commitdiff
2020-02-18 Jim ProcterJAL-3529 assert Uniprot refs must be provided as primar... tree | commitdiff
2020-02-17 Ben SoaresJAL-3341 Increase number of lines looked at by test... tree | commitdiff
2020-02-17 Jim ProcterJAL-3536 failing test and test data tree | commitdiff
2020-02-14 Jim ProcterJAL-3531 failing test tree | commitdiff
2020-02-14 Jim ProcterJAL-3529 more detailed asserts to detect whitespace... tree | commitdiff
2020-02-14 Jim ProcterJAL-3529 failing test for bug tree | commitdiff
2020-02-06 gmungocJAL-1842 unit test updated for EnsemblGene feature... bug/JAL-3509hideResnum tree | commitdiff
2020-01-29 Ben SoaresJAL-3341 Increase number of lines looked at by test... tree | commitdiff
2020-01-28 gmungocJAL-3341 debug for failing unit test bug/JAL-3341unitTestFails tree | commitdiff
2020-01-28 gmungocMerge branch 'feature/JAL-3121gffAttributeMap' into... tree | commitdiff
2020-01-24 gmungocJAL=3121 more data format validation/tests, help text... feature/JAL-3121gffAttributeMap tree | commitdiff
2020-01-23 gmungocJAL-3121 'attributes map' in GFF3 without special ... tree | commitdiff
2020-01-16 Jim ProcterMerge branch 'improvement/JAL-3449_add_install4j_instal... tree | commitdiff
2019-12-12 gmungocJAL-3490 unit test for ignore hidden regions with selec... tree | commitdiff
2019-12-12 Jim ProcterJAL-2305 moved failing CrossRef tests to Functional_Fai... tree | commitdiff
2019-12-11 gmungocJAL-3490 tests for skip hidden regions (and a bug fix) tree | commitdiff
2019-12-11 gmungocJAL-3490 revised layout and search algorithm (more... tree | commitdiff
2019-11-29 gmungocJAL-3490 Finder match across entirely gapped hidden... tree | commitdiff
2019-11-18 Ben SoaresJAL-3477 New sensible default decisions on memory,... tree | commitdiff
2019-11-01 gmungocJAL-3468 unit tests updated for changes tree | commitdiff
2019-08-22 gmungocJAL-3121 slightly cleaner parsing of, and unit test... tree | commitdiff
2019-08-22 gmungocMerge branch 'develop' into feature/JAL-3121gffAttributeMap tree | commitdiff
2019-08-22 gmungocJAL-3187 case-insensitive codon variant calculation tree | commitdiff
2019-08-22 gmungocJAL-3121 round trip GFF attributes including map-valued... tree | commitdiff
2019-08-19 gmungocJAL-3412 calculateIdWidth - more consistency, constants... tree | commitdiff
2019-08-09 gmungocJAL-3187 removal of variant feature (non-virtual) trans... tree | commitdiff
2019-07-26 gmungocMerge branch 'features/JAL-3375vcfValidation' into tree | commitdiff
2019-07-26 gmungocJAL-1793 only decode specific special characters in... tree | commitdiff
2019-07-26 gmungocJAL-3376 capture VCF POS, ID, QUAL, FILTER as feature... features/JAL-3375vcfValidation tree | commitdiff
2019-07-26 gmungocJAL-3375 format validate VCF Integer and Float fields tree | commitdiff
2019-07-25 gmungocJAL-3375 ignore '.' values for VCF data tree | commitdiff
2019-07-10 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-07-08 gmungocJAL-3187 derived peptide variants tweaks and tests tree | commitdiff
2019-07-05 gmungocJAL-1793 apply URL decoding when saving VCF attribute... tree | commitdiff
2019-06-26 Jim ProcterJAL-3332 test to check for duplicate db sources and... tree | commitdiff
2019-06-26 Jim ProcterJAL-3330 JAL-3332 relocate and simplify BeforeClass... tree | commitdiff
2019-06-26 Jim ProcterJAL-3330 test to verify sub/attributeName array is... tree | commitdiff
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence... tree | commitdiff
2019-06-18 gmungocJAL-3304 option to export linked features in Jalview... tree | commitdiff
2019-06-17 gmungocJAL-2792 JAL-3187 linked features (if shown) in Feature... tree | commitdiff
2019-06-17 gmungocJAL-3187 update alignAs code and unit tests for 'shared... tree | commitdiff
2019-06-17 gmungocJAL-3187 update unit test - protein variants not now... tree | commitdiff
2019-06-17 gmungocJAL-3187 add sequence to feature details table (and... tree | commitdiff
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