From 227c9c583a110b1581ab1036be289b1f838cf8ea Mon Sep 17 00:00:00 2001
From: Jim Procter <jprocter@issues.jalview.org>
Date: Wed, 9 Jun 2021 16:53:09 +0100
Subject: [PATCH] =?utf8?q?JAL-3840=20don=E2=80=99t=20update=20the=20modal=20?=
 =?utf8?q?residue=20count=20for=20gaps?=
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---
 src/jalview/datamodel/ResidueCount.java |    7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)

diff --git a/src/jalview/datamodel/ResidueCount.java b/src/jalview/datamodel/ResidueCount.java
index 6b52166..efab97c 100644
--- a/src/jalview/datamodel/ResidueCount.java
+++ b/src/jalview/datamodel/ResidueCount.java
@@ -212,7 +212,12 @@ public class ResidueCount
         counts[offset] = (short) ++newValue;
       }
     }
-    maxCount = Math.max(maxCount, newValue);
+
+    if (offset!=GAP_COUNT)
+    {
+      // update modal residue count
+      maxCount = Math.max(maxCount, newValue);
+    }
     return newValue;
   }
 
-- 
1.7.10.2