From 391467e57959e2c71a5051de06da2028dc07f2ba Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Fri, 24 Jun 2022 17:25:37 +0100 Subject: [PATCH] JAL-2349 TODO for tests --- test/jalview/datamodel/AlignmentTest.java | 13 +++++++++++++ 1 file changed, 13 insertions(+) diff --git a/test/jalview/datamodel/AlignmentTest.java b/test/jalview/datamodel/AlignmentTest.java index 4b1f7e9..06be982 100644 --- a/test/jalview/datamodel/AlignmentTest.java +++ b/test/jalview/datamodel/AlignmentTest.java @@ -1578,4 +1578,17 @@ public class AlignmentTest a.getHiddenColumns().hideColumns(2, 5); assertEquals(5, a.getVisibleWidth()); } + + @Test(groups = { "Functional" }) + public void testGetContactMap() + { + // TODO + // 1. test adding/removing/manipulating contact maps with/without associated + // sequence(s) or groups + // 2. For sequence associated - ensure that inserting a gap in sequence + // results in the contact map being relocated accordingly + // 3. RENDERER QUESTION - should contact maps reflect gaps in the alignment + // ? + + } } -- 1.7.10.2