From 966baa18c09b8fb041b874acdb8a850ad143d205 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Wed, 16 Feb 2022 18:43:23 +0000 Subject: [PATCH] JAL-3551 - wrap pair_fit with undo_disable and undo_enable --- src/jalview/ext/pymol/PymolCommands.java | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/src/jalview/ext/pymol/PymolCommands.java b/src/jalview/ext/pymol/PymolCommands.java index ed64c00..b69d3e3 100644 --- a/src/jalview/ext/pymol/PymolCommands.java +++ b/src/jalview/ext/pymol/PymolCommands.java @@ -114,9 +114,12 @@ public class PymolCommands extends StructureCommandsBase String refAtomsAlphaOnly = "("+getAtomSpec(refAtoms, specType)+" and (altloc '' or altloc 'a'))"; String atomSpec2AlphaOnly = "("+getAtomSpec(atomSpec, specType)+" and (altloc '' or altloc 'a'))"; // pair_fit mobile -> reference + // crashes when undo is enabled on 2.5.2 (incentive) + commands.add(new StructureCommand("undo_disable")); commands.add(new StructureCommand("pair_fit", atomSpec2AlphaOnly, refAtomsAlphaOnly)); - + commands.add(new StructureCommand("undo_enable")); + /* * and show superposed residues as cartoon */ -- 1.7.10.2