From d37ae10e4228efe3ccefd8de39a4683acf001c9b Mon Sep 17 00:00:00 2001 From: BobHanson Date: Wed, 18 Mar 2020 10:03:27 -0500 Subject: [PATCH] JalviewJS2 addition --- src/jalview/bin/JalviewJS2.java | 29 +++++++++++++++++++++++++---- 1 file changed, 25 insertions(+), 4 deletions(-) diff --git a/src/jalview/bin/JalviewJS2.java b/src/jalview/bin/JalviewJS2.java index 26110f8..dd293c9 100644 --- a/src/jalview/bin/JalviewJS2.java +++ b/src/jalview/bin/JalviewJS2.java @@ -20,16 +20,37 @@ public class JalviewJS2 static { /** - * @j2sNative + * @ could do it this way: * - * J2S.thisApplet.__Info.args = - * ["open","examples/uniref50.fa","features", - * "examples/exampleFeatures.txt"]; + * j2sNative + * + * J2S.thisApplet.__Info.args = [ "open","examples/uniref50.fa", + * "features","examples/exampleFeatures.txt", "noannotation" ]; */ } public static void main(String[] args) throws Exception { + if (args.length == 0) + { + args = new String[] { + // "headless", + "open", "examples/uniref50.fa", + "features", + "examples/exampleFeatures.txt" + // , "noannotation" + // not in jalview-develop , "showoverview" + // , "png", "test-bh.png" + }; + } + + // String cmds = "nodisplay -open examples/uniref50.fa -sortbytree -props + // test/jalview/io/testProps.jvprops -colour zappo " + // + "-jabaws http://www.compbio.dundee.ac.uk/jabaws -nosortbytree " + // + "-features examples/testdata/plantfdx.features -annotations + // examples/testdata/plantfdx.annotations -tree + // examples/testdata/uniref50_test_tree"; + // args = cmds.split(" "); Jalview.main(args); //showFocusTimer(); } -- 1.7.10.2