From e82c2d4b8c3dcd0ea3ccc087a05b81634000facb Mon Sep 17 00:00:00 2001
From: Ben Soares <b.soares@dundee.ac.uk>
Date: Wed, 10 Mar 2021 19:58:48 +0000
Subject: [PATCH] JAL-3830 install4j adds script to
 Jalview.app/Contents/MacOS/jalview but we need install4j9
 to make it executable

---
 build.gradle                                  |    1 +
 gradle.properties                             |    1 +
 utils/install4j/install4j8_template.install4j |    2 ++
 3 files changed, 4 insertions(+)

diff --git a/build.gradle b/build.gradle
index e2a5605..5588c51 100644
--- a/build.gradle
+++ b/build.gradle
@@ -1900,6 +1900,7 @@ task installers(type: com.install4j.gradle.Install4jTask) {
     'WINDOWS_APPLICATION_ID': install4jWinApplicationId,
     'MACOS_DMG_DS_STORE': install4jDMGDSStore,
     'MACOS_DMG_BG_IMAGE': install4jDMGBackgroundImage,
+    'MACOS_DMG_WRAPPER_SCRIPT': install4j_dmg_wrapper_script,
     'INSTALLER_NAME': install4jInstallerName,
     'INSTALL4J_UTILS_DIR': install4j_utils_dir,
     'GETDOWN_WEBSITE_DIR': getdown_website_dir,
diff --git a/gradle.properties b/gradle.properties
index 3088b48..1d7b10c 100644
--- a/gradle.properties
+++ b/gradle.properties
@@ -133,6 +133,7 @@ install4j_png_icon_file = jalview_logo.png
 install4j_background = jalview_logo_background_fade-640x480.png
 install4j_dmg_background = jalview_dmg_background-NON-RELEASE.png
 install4j_dmg_ds_store = jalview_dmg_DS_Store
+install4j_dmg_wrapper_script = utils/install4j/macos_jalview
 
 OSX_KEYSTORE =
 OSX_KEYPASS =
diff --git a/utils/install4j/install4j8_template.install4j b/utils/install4j/install4j8_template.install4j
index 5b3b80d..038ee90 100644
--- a/utils/install4j/install4j8_template.install4j
+++ b/utils/install4j/install4j8_template.install4j
@@ -35,6 +35,7 @@
       <variable name="WINDOWS_APPLICATION_ID" value="6595-2347-1923-0725" />
       <variable name="MACOS_DMG_DS_STORE" value="jalview_dmg_DS_Store" />
       <variable name="MACOS_DMG_BG_IMAGE" />
+      <variable name="MACOS_DMG_WRAPPER_SCRIPT" />
       <variable name="INSTALLER_NAME" value="Jalview Installer" />
       <variable name="INSTALL4J_UTILS_DIR" value="utils/install4j" />
       <variable name="GETDOWN_WEBSITE_DIR" value="getdown/website" />
@@ -1177,6 +1178,7 @@ return console.askYesNo(message, true);
         <file name=".DS_Store" file="${compiler:JALVIEW_DIR}/${compiler:MACOS_DMG_DS_STORE}" />
         <file name="${compiler:JALVIEW_APPLICATION_NAME}.app/Contents/Resources/Jalview-File.icns" file="${compiler:JALVIEW_DIR}/${compiler:INSTALL4J_UTILS_DIR}/Jalview-File.icns" />
         <file name="${compiler:JALVIEW_APPLICATION_NAME}.app/Contents/Resources/Jalview-Launch.icns" file="${compiler:JALVIEW_DIR}/${compiler:INSTALL4J_UTILS_DIR}/Jalview-Launch.icns" />
+        <file name="${compiler:JALVIEW_APPLICATION_NAME}.app/Contents/MacOS/jalview" file="${compiler:JALVIEW_DIR}/${compiler:MACOS_DMG_WRAPPER_SCRIPT}" />
       </topLevelFiles>
     </macosArchive>
     <unixInstaller name="Linux x64 Shell Installer" id="1595" mediaFileName="${compiler:UNIX_APPLICATION_FOLDER}-${compiler:JALVIEW_VERSION}-linux_x64-java_${compiler:JAVA_INTEGER_VERSION}" installDir="${compiler:UNIX_APPLICATION_FOLDER}" customInstallBaseDir="~/opt/">
-- 
1.7.10.2