From f2fed0286852eee53492661a16309f6948f7ce05 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Wed, 16 Sep 2020 17:46:36 +0100 Subject: [PATCH] JAL-3748 preserve sequence IDs from original alignment view when alignment returned by web service or analysis method. --- src/jalview/datamodel/SeqCigar.java | 1 + 1 file changed, 1 insertion(+) diff --git a/src/jalview/datamodel/SeqCigar.java b/src/jalview/datamodel/SeqCigar.java index c2a6a9c..c282d6e 100644 --- a/src/jalview/datamodel/SeqCigar.java +++ b/src/jalview/datamodel/SeqCigar.java @@ -587,6 +587,7 @@ public class SeqCigar extends CigarSimple + (bounds[2] == 0 ? -1 : bounds[2])); seqs[i].setDatasetSequence(ref); seqs[i].setDescription(ref.getDescription()); + SeqsetUtils.SeqCharacterUnhash(seqs[i],alseqs[i].seqProps); } if (segments != null) { -- 1.7.10.2