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jalview.git
2016-04-26 Jim ProcterJAL-2079 use new service to retrieve Rfam Seed alignment Release_2_9_0b1_Branch commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterJAL-2084 JAL-2079 removed RFAM(Full) from Xfam Network... commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterJAL-2079 disable RFAM(Full) source until we can retriev... commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterJAL-2079 update URL for RFAM and PFAM sources commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterJAL-2079 allow prefix+<XFAMID>+suffix type URL signature commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterJAL-2079 test for Pfam and Rfam sources to validate... commit | commitdiff | tree | snapshot
2016-04-26 gmungocJAL-1981 catch any exception when setting QuaQua look... commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterMerge branch 'bug/JAL-2080_javaws_slow' into Release_2_... commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterJAL-2080 removed all 'Class-Path' references in libs commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterJAL-2080 removed classpath references to Xerces and... commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterMerge branch 'bug/JAL-2080_javaws_slow' into Release_2_... commit | commitdiff | tree | snapshot
2016-04-26 Jim ProcterJAL-2080 mark jalview.jar as main jar resource commit | commitdiff | tree | snapshot
2015-12-09 Jim ProcterJAL-1982 hotfix to prevent NPE with applet launch on... commit | commitdiff | tree | snapshot
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 commit | commitdiff | tree | snapshot
2015-10-16 Jim ProcterMerge branch 'patch/JAL-1791_timestamp' into Release_2_... commit | commitdiff | tree | snapshot
2015-10-16 Jim ProcterJAL-1925 version change commit | commitdiff | tree | snapshot
2015-10-16 Jim ProcterJAL-1925 update what's new and release notes commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1791 remove blanket sign of examples/*.jar patch/JAL-1791_timestamp commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1791 id rather than name attrib commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1791 sign the applet with/out timestamps commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1791 add explicit proxy for benefit of jalview... commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1791 fix ant target dependencies commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1791 make timestamping optional using -Dtimestamp commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1791 add jalview.tsaurl for specifying timestamp... commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterMerge branch 'bug/JAL-1923_290b2_group_annots' into... commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1923 formatting commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1923 add groups to codon-complement and notify... commit | commitdiff | tree | snapshot
2015-10-15 Jim ProcterJAL-1923 fix: don’t add group twice commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterJAL-1684 updated fragment alignment for example and... commit | commitdiff | tree | snapshot
2015-10-08 gmungocMerge branch 'Release_2_9_0b1_Branch' of https://source... commit | commitdiff | tree | snapshot
2015-10-08 gmungocJAL-1684 example uncommented on 2.9.0b1 branch commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterJAL-1894 add licensing commit | commitdiff | tree | snapshot
2015-10-08 tcofoegbuJAL-1912 JAL-1896 release notes updated commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterJAL-1894 update what's new commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2015-10-08 tcofoegbuJAL-1912 JAL-1896 release notes updated commit | commitdiff | tree | snapshot
2015-10-08 gmungocJAL-1544 typo fix commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterJAL-1894 formatting commit | commitdiff | tree | snapshot
2015-10-08 Jim ProcterJAL-1894 organise imports commit | commitdiff | tree | snapshot
2015-10-08 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-10-07 Jim ProcterJAL-1894 source formatting commit | commitdiff | tree | snapshot
2015-10-07 Jim ProcterJAL-1894 organise imports commit | commitdiff | tree | snapshot
2015-10-07 Jim ProcterJAL-1894 update release date commit | commitdiff | tree | snapshot
2015-10-07 tcofoegbuJAL-1912 added documentation features/JAL-1912_biojson-per-sequence-annotation commit | commitdiff | tree | snapshot
2015-10-07 Jim ProcterJAL-1912 formatting commit | commitdiff | tree | snapshot
2015-10-07 Jim ProcterJAL-1912 javadoc for adjustForAlignment stating current... commit | commitdiff | tree | snapshot
2015-10-07 Jim ProcterJAL-1912 efficiency: look up sequenceMapping once per... commit | commitdiff | tree | snapshot
2015-10-07 Jim ProcterMerge branch 'features/JAL-1912_biojson-per-sequence... commit | commitdiff | tree | snapshot
2015-10-05 tcofoegbuJAL-1912 house keeping commit | commitdiff | tree | snapshot
2015-10-05 tcofoegbuJAL-1912 added null check for SequenceMapping variable... commit | commitdiff | tree | snapshot
2015-10-05 gmungocJAL-1812 set/return currentAlFrame for Groovy in headle... commit | commitdiff | tree | snapshot
2015-10-05 Jim ProcterMerge branch 'develop' into features/JAL-1912_biojson... commit | commitdiff | tree | snapshot
2015-10-05 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff | tree | snapshot
2015-10-05 Jim ProcterJAL-1894 note about menu option bugfix JAL-1865 JAL... commit | commitdiff | tree | snapshot
2015-10-05 Jim ProcterJAL-1894 update release notes for JAL-1815 JAL-1860 commit | commitdiff | tree | snapshot
2015-10-05 gmungocJAL-1684 JAL-1452 new applet parameters defaultColourNuc commit | commitdiff | tree | snapshot
2015-10-05 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-10-05 tcofoegbuJAL-1908 bugfix commit | commitdiff | tree | snapshot
2015-10-05 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2015-10-05 Jim ProcterJAL-1684 trimmed proteins to just those sequences that... commit | commitdiff | tree | snapshot
2015-10-05 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-10-05 tcofoegbuJAL-1726 updated test error msg commit | commitdiff | tree | snapshot
2015-10-05 tcofoegbuJAL-1912 updated AnnotationDisplaySettingPojo commit | commitdiff | tree | snapshot
2015-10-02 gmungocJAL-1815 restore split frame geometry including horizon... commit | commitdiff | tree | snapshot
2015-10-02 Jim ProcterJAL-1900 JAL-1625 disable iconify button for internal... commit | commitdiff | tree | snapshot
2015-10-01 Jim ProcterJAL-1894 release notes update and 6th October release... commit | commitdiff | tree | snapshot
2015-10-01 tcofoegbuJAL-1912 Double.NaN breaks JSON serialization - added... commit | commitdiff | tree | snapshot
2015-10-01 tcofoegbuJAL-1912 refactor annotation refsequence assignemnt... commit | commitdiff | tree | snapshot
2015-09-30 tcofoegbuhouse keeping commit | commitdiff | tree | snapshot
2015-09-30 tcofoegbuJAL-1860 house keeping commit | commitdiff | tree | snapshot
2015-09-30 tcofoegbuJAL-1852 made disabling querying of unpublished PDB... commit | commitdiff | tree | snapshot
2015-09-30 tcofoegbuJAL-1912 added support of tcoffee annotation and other... commit | commitdiff | tree | snapshot
2015-09-30 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-09-30 tcofoegbuJAL-1852 disable querying of unpublished PDB entries... commit | commitdiff | tree | snapshot
2015-09-30 Jim Procterfix for JAL-1883 commit | commitdiff | tree | snapshot
2015-09-29 tcofoegbuJAL-1896 fixed NPE for RNA Helice without equivalent... commit | commitdiff | tree | snapshot
2015-09-28 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-09-28 tcofoegbuJAL-1896 revised implementation to construct a ColourSc... commit | commitdiff | tree | snapshot
2015-09-28 gmungocJAL-1909 repaint complementary alignment panel after... commit | commitdiff | tree | snapshot
2015-09-25 gmungocJAL-1859 try hoverDelay of 0.1s in Jmol for more respon... commit | commitdiff | tree | snapshot
2015-09-25 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-09-25 tcofoegbuJAL-1907 bugfix for NPE while parsing a features file commit | commitdiff | tree | snapshot
2015-09-25 gmungocJAL-1815 restore split frame geometry correctly includi... commit | commitdiff | tree | snapshot
2015-09-25 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-09-25 tcofoegbuJAL-1860 disabled default enter behaviour on pdb search... commit | commitdiff | tree | snapshot
2015-09-24 gmungocJAL-1905 parse url including & correctly commit | commitdiff | tree | snapshot
2015-09-24 gmungocJAL-1904 parse feature file colours on to alignment... commit | commitdiff | tree | snapshot
2015-09-24 tcofoegbuJAL-1860 only allow enter key when valid selection... commit | commitdiff | tree | snapshot
2015-09-24 tcofoegbuJAL-1860 keyboard operation of pdb sequence fetcher... commit | commitdiff | tree | snapshot
2015-09-24 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-09-24 tcofoegbuJAL-1896 bugfix to enabled Jalview restore clustal... commit | commitdiff | tree | snapshot
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff | tree | snapshot
2015-09-22 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff | tree | snapshot
2015-09-22 Jim ProcterJAL-1894 update RELEASE for 2.9.0b1 release commit | commitdiff | tree | snapshot
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